RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 QPCTQ16769 361 aa8.35□□□□□ -1.07
RFC3-203ENST00000616236 HDGFL1Q5TGJ6 251 aa8.35□□□□□ -1.07
RFC3-203ENST00000616236 RSBN1LQ6PCB5 846 aaPredicted RBP8.35□□□□□ -1.07
RFC3-203ENST00000616236 C6orf132Q5T0Z8 1188 aa8.34□□□□□ -1.07
RFC3-203ENST00000616236 ZNF710Q8N1W2 664 aa8.34□□□□□ -1.07
RFC3-203ENST00000616236 RBM46Q8TBY0 533 aaKnown RBP8.34□□□□□ -1.07
RFC3-203ENST00000616236 MOXD2PA6NHM9 499 aa8.33□□□□□ -1.08
RFC3-203ENST00000616236 HAX1O00165 279 aa8.33□□□□□ -1.08
RFC3-203ENST00000616236 CSB-PGBD3P0DP91 1061 aa8.33□□□□□ -1.08
RFC3-203ENST00000616236 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
RFC3-203ENST00000616236 ADAMTS19Q8TE59 1207 aa8.33□□□□□ -1.08
RFC3-203ENST00000616236 JPH4Q96JJ6 628 aa8.33□□□□□ -1.08
RFC3-203ENST00000616236 RBM27Q9P2N5 1060 aaKnown RBP8.33□□□□□ -1.08
RFC3-203ENST00000616236 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
RFC3-203ENST00000616236 LILRB3O75022 631 aa8.32□□□□□ -1.08
RFC3-203ENST00000616236 IGSF3O75054 1194 aa8.32□□□□□ -1.08
RFC3-203ENST00000616236 USP17L8P0C7I0 530 aa8.32□□□□□ -1.08
RFC3-203ENST00000616236 CD46P15529 392 aa8.32□□□□□ -1.08
RFC3-203ENST00000616236 CFAP70Q5T0N1 1121 aa8.32□□□□□ -1.08
RFC3-203ENST00000616236 NUTM1Q86Y26 1132 aa8.32□□□□□ -1.08
RFC3-203ENST00000616236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.31□□□□□ -1.08
RFC3-203ENST00000616236 CARNS1A5YM72 827 aa8.31□□□□□ -1.08
RFC3-203ENST00000616236 E9PSI1 815 aa8.31□□□□□ -1.08
RFC3-203ENST00000616236 NDUFV2P19404 249 aa8.31□□□□□ -1.08
RFC3-203ENST00000616236 SRPK2P78362 688 aaKnown RBP8.31□□□□□ -1.08
RFC3-203ENST00000616236 PCDHB15Q9Y5E8 787 aa8.31□□□□□ -1.08
RFC3-203ENST00000616236 RCCD1A6NED2 376 aa8.3□□□□□ -1.08
RFC3-203ENST00000616236 NUTM2BA6NNL0 878 aaPredicted RBP8.3□□□□□ -1.08
RFC3-203ENST00000616236 NUTM2EB1AL46 878 aaPredicted RBP8.3□□□□□ -1.08
RFC3-203ENST00000616236 SEC24BO95487 1268 aa8.3□□□□□ -1.08
RFC3-203ENST00000616236 FOSBP53539 338 aa8.3□□□□□ -1.08
RFC3-203ENST00000616236 PRSS12P56730 875 aa8.3□□□□□ -1.08
RFC3-203ENST00000616236 NUTM2DQ5VT03 806 aaPredicted RBP8.3□□□□□ -1.08
RFC3-203ENST00000616236 NUTM2AQ8IVF1 878 aaPredicted RBP8.3□□□□□ -1.08
RFC3-203ENST00000616236 COLQQ9Y215 455 aaPredicted RBP8.3□□□□□ -1.08
RFC3-203ENST00000616236 PCDHGA4Q9Y5G9 962 aa8.3□□□□□ -1.08
RFC3-203ENST00000616236 NDUFB9Q9Y6M9 179 aa8.3□□□□□ -1.08
RFC3-203ENST00000616236 GJD4Q96KN9 370 aaPredicted RBP8.29□□□□□ -1.08
RFC3-203ENST00000616236 DDX11L8A8MPP1 907 aa8.28□□□□□ -1.08
RFC3-203ENST00000616236 GJA5P36382 358 aa8.28□□□□□ -1.08
RFC3-203ENST00000616236 CLCN6P51797 869 aa8.28□□□□□ -1.08
RFC3-203ENST00000616236 WASHC4Q2M389 1173 aa8.28□□□□□ -1.08
RFC3-203ENST00000616236 CABLES1Q8TDN4 633 aa8.28□□□□□ -1.08
RFC3-203ENST00000616236 CDCA7LQ96GN5 454 aa8.28□□□□□ -1.08
RFC3-203ENST00000616236 PPP1R12CQ9BZL4 782 aa8.28□□□□□ -1.08
RFC3-203ENST00000616236 IVNS1ABPQ9Y6Y0 642 aa8.28□□□□□ -1.08
RFC3-203ENST00000616236 KDM4FA0A1W2PPD8 638 aa8.27□□□□□ -1.09
RFC3-203ENST00000616236 EVX2Q03828 476 aa8.27□□□□□ -1.09
RFC3-203ENST00000616236 C3orf67Q6ZVT6 689 aa8.27□□□□□ -1.09
RFC3-203ENST00000616236 SULF1Q8IWU6 871 aa8.27□□□□□ -1.09
RFC3-203ENST00000616236 ZDHHC16Q969W1 377 aa8.27□□□□□ -1.09
RFC3-203ENST00000616236 CCDC27Q2M243 656 aa8.26□□□□□ -1.09
RFC3-203ENST00000616236 ZNF454Q8N9F8 522 aa8.26□□□□□ -1.09
RFC3-203ENST00000616236 EYA1Q99502 592 aa8.25□□□□□ -1.09
RFC3-203ENST00000616236 ADAM33Q9BZ11 813 aa8.25□□□□□ -1.09
RFC3-203ENST00000616236 FAM198AQ9UFP1 575 aa8.25□□□□□ -1.09
RFC3-203ENST00000616236 SHROOM4Q9ULL8 1493 aa8.25□□□□□ -1.09
RFC3-203ENST00000616236 PALM3A6NDB9 673 aaPredicted RBP8.24□□□□□ -1.09
RFC3-203ENST00000616236 LMOD1P29536 600 aaPredicted RBP8.24□□□□□ -1.09
RFC3-203ENST00000616236 VAC14Q08AM6 782 aa8.24□□□□□ -1.09
RFC3-203ENST00000616236 PRPF38BQ5VTL8 546 aaKnown RBP8.24□□□□□ -1.09
RFC3-203ENST00000616236 GPR37L1O60883 481 aa8.23□□□□□ -1.09
RFC3-203ENST00000616236 SND1Q7KZF4 910 aaKnown RBP eCLIP8.23□□□□□ -1.09
RFC3-203ENST00000616236 VRTNQ9H8Y1 702 aa8.23□□□□□ -1.09
RFC3-203ENST00000616236 HMX1Q9NP08 348 aaPredicted RBP8.23□□□□□ -1.09
RFC3-203ENST00000616236 AMOTL2Q9Y2J4 779 aa8.23□□□□□ -1.09
RFC3-203ENST00000616236 CDCA8Q53HL2 280 aa8.22□□□□□ -1.09
RFC3-203ENST00000616236 PELP1Q8IZL8 1130 aaKnown RBP8.22□□□□□ -1.09
RFC3-203ENST00000616236 TRIM34Q9BYJ4 488 aa8.22□□□□□ -1.09
RFC3-203ENST00000616236 ALG2Q9H553 416 aa8.22□□□□□ -1.09
RFC3-203ENST00000616236 ZBTB3Q9H5J0 574 aa8.22□□□□□ -1.09
RFC3-203ENST00000616236 TFIP11Q9UBB9 837 aaKnown RBP8.22□□□□□ -1.09
RFC3-203ENST00000616236 CTDSPL2Q05D32 466 aa8.21□□□□□ -1.1
RFC3-203ENST00000616236 POTEFA5A3E0 1075 aa8.2□□□□□ -1.1
RFC3-203ENST00000616236 DNAJB2P25686 324 aa8.2□□□□□ -1.1
RFC3-203ENST00000616236 NUDT18Q6ZVK8 323 aa8.2□□□□□ -1.1
RFC3-203ENST00000616236 TMEM88BA6NKF7 163 aa8.19□□□□□ -1.1
RFC3-203ENST00000616236 C3orf80F5H4A9 247 aa8.19□□□□□ -1.1
RFC3-203ENST00000616236 KDM4AO75164 1064 aa8.19□□□□□ -1.1
RFC3-203ENST00000616236 ATG7O95352 703 aa8.19□□□□□ -1.1
RFC3-203ENST00000616236 RDH13Q8NBN7 331 aa8.19□□□□□ -1.1
RFC3-203ENST00000616236 UCN2Q96RP3 112 aa8.19□□□□□ -1.1
RFC3-203ENST00000616236 FDX1P10109 184 aa8.18□□□□□ -1.1
RFC3-203ENST00000616236 COL9A1P20849 921 aa8.18□□□□□ -1.1
RFC3-203ENST00000616236 TMEM134Q9H6X4 195 aa8.18□□□□□ -1.1
RFC3-203ENST00000616236 TSKSQ9UJT2 592 aa8.18□□□□□ -1.1
RFC3-203ENST00000616236 PRR7Q8TB68 274 aa8.17□□□□□ -1.1
RFC3-203ENST00000616236 LRRN4Q8WUT4 740 aa8.17□□□□□ -1.1
RFC3-203ENST00000616236 MYT1LQ9UL68 1186 aa8.17□□□□□ -1.1
RFC3-203ENST00000616236 PCDHGC3Q9UN70 934 aa8.17□□□□□ -1.1
RFC3-203ENST00000616236 HOXA2O43364 376 aa8.16□□□□□ -1.1
RFC3-203ENST00000616236 NUDT7P0C024 238 aa8.15□□□□□ -1.1
RFC3-203ENST00000616236 USP46P62068 366 aa8.15□□□□□ -1.1
RFC3-203ENST00000616236 GUCA2AQ02747 115 aa8.15□□□□□ -1.1
RFC3-203ENST00000616236 EPS8L1Q8TE68 723 aa8.15□□□□□ -1.1
RFC3-203ENST00000616236 TSC1Q92574 1164 aa8.15□□□□□ -1.1
RFC3-203ENST00000616236 KHSRPQ92945 711 aaKnown RBP eCLIP8.15□□□□□ -1.14e-7■■■■□ 23.4
RFC3-203ENST00000616236 TATDN2Q93075 761 aa8.15□□□□□ -1.1
RFC3-203ENST00000616236 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
RFC3-203ENST00000616236 MAFBQ9Y5Q3 323 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms