RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 NCOA3Q9Y6Q9 1424 aa15.17■□□□□ 0.02
SNX9-202ENST00000614703 RBM33Q96EV2 1170 aaKnown RBP15.15■□□□□ 0.02
SNX9-202ENST00000614703 CHD2O14647 1828 aaKnown RBP15.15■□□□□ 0.02
SNX9-202ENST00000614703 ABCC5O15440 1437 aa15.14■□□□□ 0.01
SNX9-202ENST00000614703 NOS1P29475 1434 aa15.14■□□□□ 0.01
SNX9-202ENST00000614703 COL16A1Q07092 1604 aaPredicted RBP15.14■□□□□ 0.01
SNX9-202ENST00000614703 ANKRD30AQ9BXX3 1397 aa15.13■□□□□ 0.01
SNX9-202ENST00000614703 PPP1R15AO75807 674 aaPredicted RBP15.13■□□□□ 0.01
SNX9-202ENST00000614703 UPF1Q92900 1129 aaKnown RBP eCLIP15.13■□□□□ 0.01
SNX9-202ENST00000614703 PLEKHG1Q9ULL1 1385 aa15.12■□□□□ 0.01
SNX9-202ENST00000614703 C14orf37Q86TY3 774 aa15.12■□□□□ 0.01
SNX9-202ENST00000614703 CADPS2Q86UW7 1296 aa15.12■□□□□ 0.01
SNX9-202ENST00000614703 PTPN23Q9H3S7 1636 aa15.12■□□□□ 0.01
SNX9-202ENST00000614703 DAPK1P53355 1430 aa15.11■□□□□ 0.01
SNX9-202ENST00000614703 KANK4Q5T7N3 995 aaPredicted RBP15.11■□□□□ 0.01
SNX9-202ENST00000614703 RPRD2Q5VT52 1461 aaKnown RBP15.11■□□□□ 0.01
SNX9-202ENST00000614703 SHPRHQ149N8 1683 aa15.1■□□□□ 0.01
SNX9-202ENST00000614703 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.1■□□□□ 0.01
SNX9-202ENST00000614703 TBX22Q9Y458 520 aa15.1■□□□□ 0.01
SNX9-202ENST00000614703 ATF3P18847 181 aa15.09■□□□□ 0.01
SNX9-202ENST00000614703 RXRBP28702 533 aa15.09■□□□□ 0.01
SNX9-202ENST00000614703 APLP2Q06481 763 aa15.09■□□□□ 0.01
SNX9-202ENST00000614703 TRIM52Q96A61 297 aa15.09■□□□□ 0.01
SNX9-202ENST00000614703 AHDC1Q5TGY3 1603 aaPredicted RBP15.09■□□□□ 0.01
SNX9-202ENST00000614703 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0.01
SNX9-202ENST00000614703 C19orf44Q9H6X5 657 aa15.08■□□□□ 0
SNX9-202ENST00000614703 ZFYVE9O95405 1425 aa15.08■□□□□ 0
SNX9-202ENST00000614703 LRP6O75581 1613 aa15.07■□□□□ 0
SNX9-202ENST00000614703 PIK3R4Q99570 1358 aa15.07■□□□□ 0
SNX9-202ENST00000614703 RIMS2Q9UQ26 1411 aa15.07■□□□□ 0
SNX9-202ENST00000614703 DIP2AQ14689 1571 aa15.06■□□□□ 0
SNX9-202ENST00000614703 GCC2Q8IWJ2 1684 aa15.05■□□□□ -0
SNX9-202ENST00000614703 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.05■□□□□ -0
SNX9-202ENST00000614703 MYO5BQ9ULV0 1848 aa15.05■□□□□ -0
SNX9-202ENST00000614703 CHIC2Q9UKJ5 165 aa15.04■□□□□ -0
SNX9-202ENST00000614703 TMEM131LA2VDJ0 1609 aa15.03■□□□□ -0
SNX9-202ENST00000614703 FOXD1Q16676 465 aa15.02■□□□□ -0
SNX9-202ENST00000614703 ADGRL2O95490 1459 aa15.01□□□□□ -0.01
SNX9-202ENST00000614703 DCCP43146 1447 aa15□□□□□ -0.01
SNX9-202ENST00000614703 TRPM2O94759 1503 aa15□□□□□ -0.01
SNX9-202ENST00000614703 NUTM2BA6NNL0 878 aaPredicted RBP14.99□□□□□ -0.01
SNX9-202ENST00000614703 NUTM2EB1AL46 878 aaPredicted RBP14.99□□□□□ -0.01
SNX9-202ENST00000614703 CHGAP10645 457 aaKnown RBP14.99□□□□□ -0.01
SNX9-202ENST00000614703 NUTM2AQ8IVF1 878 aaPredicted RBP14.99□□□□□ -0.01
SNX9-202ENST00000614703 ANKRD50Q9ULJ7 1429 aa14.99□□□□□ -0.01
SNX9-202ENST00000614703 AFF2P51816 1311 aa14.98□□□□□ -0.01
SNX9-202ENST00000614703 BRINP3Q76B58 766 aa14.98□□□□□ -0.01
SNX9-202ENST00000614703 LRRC59Q96AG4 307 aaKnown RBP14.98□□□□□ -0.01
SNX9-202ENST00000614703 ADAMTS13Q76LX8 1427 aa14.98□□□□□ -0.01
SNX9-202ENST00000614703 SETD5Q9C0A6 1442 aa14.98□□□□□ -0.01
SNX9-202ENST00000614703 SRCAPQ6ZRS2 3230 aa14.98□□□□□ -0.01
SNX9-202ENST00000614703 RBM6P78332 1123 aaKnown RBP14.97□□□□□ -0.01
SNX9-202ENST00000614703 AMOTL2Q9Y2J4 779 aa14.96□□□□□ -0.01
SNX9-202ENST00000614703 NGLY1Q96IV0 654 aa14.95□□□□□ -0.02
SNX9-202ENST00000614703 ASXL1Q8IXJ9 1541 aa14.95□□□□□ -0.02
SNX9-202ENST00000614703 QTRT2Q9H974 415 aaKnown RBP14.94□□□□□ -0.02
SNX9-202ENST00000614703 NHSL1Q5SYE7 1610 aa14.94□□□□□ -0.02
SNX9-202ENST00000614703 NUTM2DQ5VT03 806 aaPredicted RBP14.92□□□□□ -0.02
SNX9-202ENST00000614703 C8orf37Q96NL8 207 aa14.92□□□□□ -0.02
SNX9-202ENST00000614703 UNC13BO14795 1591 aa14.92□□□□□ -0.02
SNX9-202ENST00000614703 ATAD2Q6PL18 1390 aa14.91□□□□□ -0.02
SNX9-202ENST00000614703 RGS12O14924 1447 aa14.91□□□□□ -0.02
SNX9-202ENST00000614703 E9PCH4 1651 aa14.9□□□□□ -0.02
SNX9-202ENST00000614703 FAM50AQ14320 339 aaKnown RBP14.9□□□□□ -0.02
SNX9-202ENST00000614703 MST1RQ04912 1400 aa14.9□□□□□ -0.02
SNX9-202ENST00000614703 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
SNX9-202ENST00000614703 PTPRUQ92729 1446 aa14.89□□□□□ -0.03
SNX9-202ENST00000614703 XRN1Q8IZH2 1706 aaKnown RBP14.89□□□□□ -0.03
SNX9-202ENST00000614703 IQGAP3Q86VI3 1631 aa14.88□□□□□ -0.03
SNX9-202ENST00000614703 PNPLA6Q8IY17 1366 aa14.87□□□□□ -0.03
SNX9-202ENST00000614703 SETBP1Q9Y6X0 1596 aa14.87□□□□□ -0.03
SNX9-202ENST00000614703 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
SNX9-202ENST00000614703 ADGRL3Q9HAR2 1447 aa14.86□□□□□ -0.03
SNX9-202ENST00000614703 TRPC5Q9UL62 973 aaPredicted RBP14.85□□□□□ -0.03
SNX9-202ENST00000614703 CCDC125Q86Z20 511 aa14.84□□□□□ -0.03
SNX9-202ENST00000614703 ADAMTS2O95450 1211 aa14.83□□□□□ -0.04
SNX9-202ENST00000614703 ZNF326Q5BKZ1 582 aaKnown RBP14.83□□□□□ -0.04
SNX9-202ENST00000614703 USP21Q9UK80 565 aa14.83□□□□□ -0.04
SNX9-202ENST00000614703 NRXN3Q9Y4C0 1643 aa14.83□□□□□ -0.04
SNX9-202ENST00000614703 ROCK1Q13464 1354 aa14.83□□□□□ -0.04
SNX9-202ENST00000614703 NUP155O75694 1391 aa14.82□□□□□ -0.04
SNX9-202ENST00000614703 PTCH1Q13635 1447 aa14.82□□□□□ -0.04
SNX9-202ENST00000614703 LAMC1P11047 1609 aa14.81□□□□□ -0.04
SNX9-202ENST00000614703 EP400Q96L91 3159 aa14.81□□□□□ -0.04
SNX9-202ENST00000614703 NALCNQ8IZF0 1738 aa14.8□□□□□ -0.04
SNX9-202ENST00000614703 FNBP4Q8N3X1 1017 aaPredicted RBP14.8□□□□□ -0.04
SNX9-202ENST00000614703 METP08581 1390 aa14.79□□□□□ -0.04
SNX9-202ENST00000614703 SOS2Q07890 1332 aaPredicted RBP14.79□□□□□ -0.04
SNX9-202ENST00000614703 SPHKAPQ2M3C7 1700 aa14.79□□□□□ -0.04
SNX9-202ENST00000614703 C1orf167Q5SNV9 1468 aa14.79□□□□□ -0.04
SNX9-202ENST00000614703 DDX17Q92841 729 aaKnown RBP14.79□□□□□ -0.04
SNX9-202ENST00000614703 ATRNO75882 1429 aa14.76□□□□□ -0.05
SNX9-202ENST00000614703 COL22A1Q8NFW1 1626 aaPredicted RBP14.75□□□□□ -0.05
SNX9-202ENST00000614703 KIF1BO60333 1816 aa14.73□□□□□ -0.05
SNX9-202ENST00000614703 NPHP3Q7Z494 1330 aa14.73□□□□□ -0.05
SNX9-202ENST00000614703 NEXMIFQ5QGS0 1516 aa14.72□□□□□ -0.05
SNX9-202ENST00000614703 VGFO15240 615 aaPredicted RBP14.72□□□□□ -0.05
SNX9-202ENST00000614703 ORAI2Q96SN7 254 aa14.72□□□□□ -0.05
SNX9-202ENST00000614703 MARF1Q9Y4F3 1742 aaKnown RBP14.72□□□□□ -0.05
SNX9-202ENST00000614703 HFM1A2PYH4 1435 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms