RNA–Protein interactions for RNA: ENST00000613513.1

GTF2I-213, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-213ENST00000613513 ZFYVE9O95405 1425 aa29.58■■■□□ 2.33
GTF2I-213ENST00000613513 E9PCH4 1651 aa29.57■■■□□ 2.32
GTF2I-213ENST00000613513 NAIPQ13075 1403 aa29.56■■■□□ 2.32
GTF2I-213ENST00000613513 DISP3Q9P2K9 1392 aa29.56■■■□□ 2.32
GTF2I-213ENST00000613513 TBX22Q9Y458 520 aa29.55■■■□□ 2.32
GTF2I-213ENST00000613513 TMEM131LA2VDJ0 1609 aa29.55■■■□□ 2.32
GTF2I-213ENST00000613513 STRCP1A6NGW2 1772 aa29.54■■■□□ 2.32
GTF2I-213ENST00000613513 HSPA1LP34931 641 aa29.52■■■□□ 2.32
GTF2I-213ENST00000613513 PROSER2Q86WR7 435 aaPredicted RBP29.52■■■□□ 2.32
GTF2I-213ENST00000613513 HFM1A2PYH4 1435 aa29.52■■■□□ 2.32
GTF2I-213ENST00000613513 TRIM52Q96A61 297 aa29.47■■■□□ 2.31
GTF2I-213ENST00000613513 TMEM94Q12767 1356 aa29.47■■■□□ 2.31
GTF2I-213ENST00000613513 NKTRP30414 1462 aaKnown RBP29.46■■■□□ 2.31
GTF2I-213ENST00000613513 ACIN1Q9UKV3 1341 aaKnown RBP29.45■■■□□ 2.31
GTF2I-213ENST00000613513 PIK3R4Q99570 1358 aa29.44■■■□□ 2.3
GTF2I-213ENST00000613513 ZNF326Q5BKZ1 582 aaKnown RBP29.41■■■□□ 2.3
GTF2I-213ENST00000613513 ALKQ9UM73 1620 aa29.41■■■□□ 2.3
GTF2I-213ENST00000613513 SLC4A1APQ9BWU0 796 aaKnown RBP29.4■■■□□ 2.3
GTF2I-213ENST00000613513 MYO5BQ9ULV0 1848 aa29.4■■■□□ 2.3
GTF2I-213ENST00000613513 NWD1Q149M9 1564 aa29.39■■■□□ 2.29
GTF2I-213ENST00000613513 NCOA3Q9Y6Q9 1424 aa29.38■■■□□ 2.29
GTF2I-213ENST00000613513 NUTM2DQ5VT03 806 aaPredicted RBP29.38■■■□□ 2.29
GTF2I-213ENST00000613513 FAM135BQ49AJ0 1406 aa29.37■■■□□ 2.29
GTF2I-213ENST00000613513 MSH6P52701 1360 aa29.37■■■□□ 2.29
GTF2I-213ENST00000613513 SPHKAPQ2M3C7 1700 aa29.37■■■□□ 2.29
GTF2I-213ENST00000613513 DIP2AQ14689 1571 aa29.36■■■□□ 2.29
GTF2I-213ENST00000613513 ADAMTS13Q76LX8 1427 aa29.36■■■□□ 2.29
GTF2I-213ENST00000613513 SENP3Q9H4L4 574 aaPredicted RBP29.34■■■□□ 2.29
GTF2I-213ENST00000613513 TRPM2O94759 1503 aa29.33■■■□□ 2.29
GTF2I-213ENST00000613513 XIRP1Q702N8 1843 aaKnown RBP29.31■■■□□ 2.28
GTF2I-213ENST00000613513 CHD2O14647 1828 aaKnown RBP29.3■■■□□ 2.28
GTF2I-213ENST00000613513 RPGRIP1LQ68CZ1 1315 aa29.29■■■□□ 2.28
GTF2I-213ENST00000613513 RBM33Q96EV2 1170 aaKnown RBP29.29■■■□□ 2.28
GTF2I-213ENST00000613513 VGFO15240 615 aaPredicted RBP29.28■■■□□ 2.28
GTF2I-213ENST00000613513 SLAIN2Q9P270 581 aa29.28■■■□□ 2.28
GTF2I-213ENST00000613513 AMOTL2Q9Y2J4 779 aa29.28■■■□□ 2.28
GTF2I-213ENST00000613513 C14orf37Q86TY3 774 aa29.27■■■□□ 2.28
GTF2I-213ENST00000613513 C19orf44Q9H6X5 657 aa29.27■■■□□ 2.28
GTF2I-213ENST00000613513 ILDR2Q71H61 639 aa29.24■■■□□ 2.27
GTF2I-213ENST00000613513 CADPS2Q86UW7 1296 aa29.24■■■□□ 2.27
GTF2I-213ENST00000613513 SETBP1Q9Y6X0 1596 aa29.22■■■□□ 2.27
GTF2I-213ENST00000613513 CLTCL1P53675 1640 aa29.22■■■□□ 2.27
GTF2I-213ENST00000613513 ATF3P18847 181 aa29.21■■■□□ 2.27
GTF2I-213ENST00000613513 MPHOSPH9Q99550 1183 aa29.2■■■□□ 2.26
GTF2I-213ENST00000613513 KIF1BO60333 1816 aa29.18■■■□□ 2.26
GTF2I-213ENST00000613513 SOCS7O14512 581 aa29.18■■■□□ 2.26
GTF2I-213ENST00000613513 PHF23Q9BUL5 403 aaPredicted RBP29.16■■■□□ 2.26
GTF2I-213ENST00000613513 NEXMIFQ5QGS0 1516 aa29.15■■■□□ 2.26
GTF2I-213ENST00000613513 MED1Q15648 1581 aaPredicted RBP29.15■■■□□ 2.26
GTF2I-213ENST00000613513 PTPRUQ92729 1446 aa29.14■■■□□ 2.26
GTF2I-213ENST00000613513 SETD5Q9C0A6 1442 aa29.13■■■□□ 2.25
GTF2I-213ENST00000613513 METP08581 1390 aa29.13■■■□□ 2.25
GTF2I-213ENST00000613513 CCDC144AA2RUR9 1427 aa29.12■■■□□ 2.25
GTF2I-213ENST00000613513 NRXN3Q9Y4C0 1643 aa29.1■■■□□ 2.25
GTF2I-213ENST00000613513 DCCP43146 1447 aa29.1■■■□□ 2.25
GTF2I-213ENST00000613513 ROBO1Q9Y6N7 1651 aa29.09■■■□□ 2.25
GTF2I-213ENST00000613513 FOXD1Q16676 465 aa29.09■■■□□ 2.25
GTF2I-213ENST00000613513 XRN1Q8IZH2 1706 aaKnown RBP29.03■■■□□ 2.24
GTF2I-213ENST00000613513 ANKRD30BQ9BXX2 1392 aa29.03■■■□□ 2.24
GTF2I-213ENST00000613513 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.01■■■□□ 2.23
GTF2I-213ENST00000613513 HRCP23327 699 aa29.01■■■□□ 2.23
GTF2I-213ENST00000613513 JCADQ9P266 1359 aa29.01■■■□□ 2.23
GTF2I-213ENST00000613513 RGL3Q3MIN7 710 aa29■■■□□ 2.23
GTF2I-213ENST00000613513 SPATA31E1Q6ZUB1 1445 aa28.98■■■□□ 2.23
GTF2I-213ENST00000613513 PTCH1Q13635 1447 aa28.97■■■□□ 2.23
GTF2I-213ENST00000613513 ADGRL3Q9HAR2 1447 aa28.97■■■□□ 2.23
GTF2I-213ENST00000613513 RAB3GAP2Q9H2M9 1393 aa28.97■■■□□ 2.23
GTF2I-213ENST00000613513 PRAG1Q86YV5 1406 aa28.96■■■□□ 2.23
GTF2I-213ENST00000613513 BRINP3Q76B58 766 aa28.96■■■□□ 2.23
GTF2I-213ENST00000613513 PPLO60437 1756 aa28.93■■■□□ 2.22
GTF2I-213ENST00000613513 SPATA31A6Q5VVP1 1343 aa28.92■■■□□ 2.22
GTF2I-213ENST00000613513 ADGRF5Q8IZF2 1346 aa28.92■■■□□ 2.22
GTF2I-213ENST00000613513 PHLPP1O60346 1717 aa28.91■■■□□ 2.22
GTF2I-213ENST00000613513 MST1RQ04912 1400 aa28.9■■■□□ 2.22
GTF2I-213ENST00000613513 AHDC1Q5TGY3 1603 aaPredicted RBP28.89■■■□□ 2.22
GTF2I-213ENST00000613513 ROBO2Q9HCK4 1378 aa28.88■■■□□ 2.21
GTF2I-213ENST00000613513 LRRC59Q96AG4 307 aaKnown RBP28.85■■■□□ 2.21
GTF2I-213ENST00000613513 RGS17Q9UGC6 210 aaPredicted RBP28.85■■■□□ 2.21
GTF2I-213ENST00000613513 SETD1AO15047 1707 aaKnown RBP28.84■■■□□ 2.21
GTF2I-213ENST00000613513 COL16A1Q07092 1604 aaPredicted RBP28.83■■■□□ 2.21
GTF2I-213ENST00000613513 STAC3Q96MF2 364 aa28.83■■■□□ 2.21
GTF2I-213ENST00000613513 ABCC11Q96J66 1382 aa28.83■■■□□ 2.21
GTF2I-213ENST00000613513 LRPPRCP42704 1394 aaKnown RBP28.82■■■□□ 2.2
GTF2I-213ENST00000613513 ASXL1Q8IXJ9 1541 aa28.82■■■□□ 2.2
GTF2I-213ENST00000613513 PIK3C2GO75747 1445 aa28.81■■■□□ 2.2
GTF2I-213ENST00000613513 SIRT1Q96EB6 747 aa28.81■■■□□ 2.2
GTF2I-213ENST00000613513 C14orf93Q9H972 538 aaKnown RBP28.81■■■□□ 2.2
GTF2I-213ENST00000613513 TECPR2O15040 1411 aa28.79■■■□□ 2.2
GTF2I-213ENST00000613513 C1orf167Q5SNV9 1468 aa28.78■■■□□ 2.2
GTF2I-213ENST00000613513 STK26Q9P289 416 aa28.78■■■□□ 2.2
GTF2I-213ENST00000613513 MEX3CQ5U5Q3 659 aaKnown RBP28.77■■■□□ 2.2
GTF2I-213ENST00000613513 NALCNQ8IZF0 1738 aa28.75■■■□□ 2.19
GTF2I-213ENST00000613513 TMEM132EQ6IEE7 984 aa28.75■■■□□ 2.19
GTF2I-213ENST00000613513 MYOM2P54296 1465 aa28.74■■■□□ 2.19
GTF2I-213ENST00000613513 IFT172Q9UG01 1749 aa28.74■■■□□ 2.19
GTF2I-213ENST00000613513 DHX57Q6P158 1386 aaKnown RBP28.74■■■□□ 2.19
GTF2I-213ENST00000613513 ZNF772Q68DY9 489 aaPredicted RBP28.73■■■□□ 2.19
GTF2I-213ENST00000613513 NRXN1Q9ULB1 1477 aa28.72■■■□□ 2.19
GTF2I-213ENST00000613513 YTHDC2Q9H6S0 1430 aaKnown RBP28.71■■■□□ 2.19
GTF2I-213ENST00000613513 SHPRHQ149N8 1683 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms