RNA–Protein interactions for RNA: ENST00000613217.4

NCAM1-220, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-220ENST00000613217 TET3O43151 1660 aa19.04■□□□□ 0.64
NCAM1-220ENST00000613217 MSH6P52701 1360 aa19.04■□□□□ 0.64
NCAM1-220ENST00000613217 SLC26A8Q96RN1 970 aa19.03■□□□□ 0.64
NCAM1-220ENST00000613217 PLEKHG1Q9ULL1 1385 aa19.01■□□□□ 0.63
NCAM1-220ENST00000613217 NWD1Q149M9 1564 aa19■□□□□ 0.63
NCAM1-220ENST00000613217 XIRP1Q702N8 1843 aaKnown RBP19■□□□□ 0.63
NCAM1-220ENST00000613217 NCOA3Q9Y6Q9 1424 aa19■□□□□ 0.63
NCAM1-220ENST00000613217 ROCK1Q13464 1354 aa18.97■□□□□ 0.63
NCAM1-220ENST00000613217 TBX22Q9Y458 520 aa18.97■□□□□ 0.63
NCAM1-220ENST00000613217 RIMS2Q9UQ26 1411 aa18.97■□□□□ 0.63
NCAM1-220ENST00000613217 ZFYVE9O95405 1425 aa18.96■□□□□ 0.63
NCAM1-220ENST00000613217 SLAIN2Q9P270 581 aa18.95■□□□□ 0.62
NCAM1-220ENST00000613217 GCC2Q8IWJ2 1684 aa18.95■□□□□ 0.62
NCAM1-220ENST00000613217 PIK3R4Q99570 1358 aa18.94■□□□□ 0.62
NCAM1-220ENST00000613217 ROBO1Q9Y6N7 1651 aa18.94■□□□□ 0.62
NCAM1-220ENST00000613217 UNC13BO14795 1591 aa18.93■□□□□ 0.62
NCAM1-220ENST00000613217 CHGAP10645 457 aaKnown RBP18.92■□□□□ 0.62
NCAM1-220ENST00000613217 C14orf37Q86TY3 774 aa18.92■□□□□ 0.62
NCAM1-220ENST00000613217 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
NCAM1-220ENST00000613217 CADPS2Q86UW7 1296 aa18.91■□□□□ 0.62
NCAM1-220ENST00000613217 TMEM131LA2VDJ0 1609 aa18.91■□□□□ 0.62
NCAM1-220ENST00000613217 JCADQ9P266 1359 aa18.91■□□□□ 0.62
NCAM1-220ENST00000613217 RGS17Q9UGC6 210 aaPredicted RBP18.89■□□□□ 0.61
NCAM1-220ENST00000613217 CHD2O14647 1828 aaKnown RBP18.88■□□□□ 0.61
NCAM1-220ENST00000613217 ATF3P18847 181 aa18.88■□□□□ 0.61
NCAM1-220ENST00000613217 RBM33Q96EV2 1170 aaKnown RBP18.87■□□□□ 0.61
NCAM1-220ENST00000613217 C19orf44Q9H6X5 657 aa18.87■□□□□ 0.61
NCAM1-220ENST00000613217 IQGAP3Q86VI3 1631 aa18.86■□□□□ 0.61
NCAM1-220ENST00000613217 NUP155O75694 1391 aa18.86■□□□□ 0.61
NCAM1-220ENST00000613217 SPATA31A6Q5VVP1 1343 aa18.85■□□□□ 0.61
NCAM1-220ENST00000613217 TRPM2O94759 1503 aa18.84■□□□□ 0.61
NCAM1-220ENST00000613217 PHLPP1O60346 1717 aa18.84■□□□□ 0.61
NCAM1-220ENST00000613217 E9PCH4 1651 aa18.83■□□□□ 0.61
NCAM1-220ENST00000613217 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.6
NCAM1-220ENST00000613217 MYO5BQ9ULV0 1848 aa18.82■□□□□ 0.6
NCAM1-220ENST00000613217 DCCP43146 1447 aa18.81■□□□□ 0.6
NCAM1-220ENST00000613217 POTEAQ6S8J7 498 aa18.8■□□□□ 0.6
NCAM1-220ENST00000613217 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
NCAM1-220ENST00000613217 ZNF772Q68DY9 489 aaPredicted RBP18.79■□□□□ 0.6
NCAM1-220ENST00000613217 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
NCAM1-220ENST00000613217 NUTM2DQ5VT03 806 aaPredicted RBP18.77■□□□□ 0.6
NCAM1-220ENST00000613217 AHDC1Q5TGY3 1603 aaPredicted RBP18.77■□□□□ 0.6
NCAM1-220ENST00000613217 COL16A1Q07092 1604 aaPredicted RBP18.76■□□□□ 0.59
NCAM1-220ENST00000613217 ITGAEP38570 1179 aa18.76■□□□□ 0.59
NCAM1-220ENST00000613217 ZNF326Q5BKZ1 582 aaKnown RBP18.76■□□□□ 0.59
NCAM1-220ENST00000613217 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.74■□□□□ 0.59
NCAM1-220ENST00000613217 SETBP1Q9Y6X0 1596 aa18.73■□□□□ 0.59
NCAM1-220ENST00000613217 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
NCAM1-220ENST00000613217 SHPRHQ149N8 1683 aa18.7■□□□□ 0.58
NCAM1-220ENST00000613217 BRINP3Q76B58 766 aa18.7■□□□□ 0.58
NCAM1-220ENST00000613217 LRRC59Q96AG4 307 aaKnown RBP18.69■□□□□ 0.58
NCAM1-220ENST00000613217 PTPRUQ92729 1446 aa18.68■□□□□ 0.58
NCAM1-220ENST00000613217 XRN1Q8IZH2 1706 aaKnown RBP18.67■□□□□ 0.58
NCAM1-220ENST00000613217 SETD5Q9C0A6 1442 aa18.66■□□□□ 0.58
NCAM1-220ENST00000613217 VGFO15240 615 aaPredicted RBP18.66■□□□□ 0.58
NCAM1-220ENST00000613217 ASXL1Q8IXJ9 1541 aa18.65■□□□□ 0.58
NCAM1-220ENST00000613217 LRP6O75581 1613 aa18.65■□□□□ 0.58
NCAM1-220ENST00000613217 RXRBP28702 533 aa18.65■□□□□ 0.58
NCAM1-220ENST00000613217 ADGRL3Q9HAR2 1447 aa18.65■□□□□ 0.58
NCAM1-220ENST00000613217 MST1RQ04912 1400 aa18.64■□□□□ 0.57
NCAM1-220ENST00000613217 RPGRIP1LQ68CZ1 1315 aa18.63■□□□□ 0.57
NCAM1-220ENST00000613217 METP08581 1390 aa18.63■□□□□ 0.57
NCAM1-220ENST00000613217 CDK12Q9NYV4 1490 aaPredicted RBP18.63■□□□□ 0.57
NCAM1-220ENST00000613217 NRXN3Q9Y4C0 1643 aa18.63■□□□□ 0.57
NCAM1-220ENST00000613217 RRBP1Q9P2E9 1410 aaKnown RBP18.61■□□□□ 0.57
NCAM1-220ENST00000613217 NUTM2BA6NNL0 878 aaPredicted RBP18.61■□□□□ 0.57
NCAM1-220ENST00000613217 NUTM2EB1AL46 878 aaPredicted RBP18.61■□□□□ 0.57
NCAM1-220ENST00000613217 NUTM2AQ8IVF1 878 aaPredicted RBP18.61■□□□□ 0.57
NCAM1-220ENST00000613217 NEXMIFQ5QGS0 1516 aa18.6■□□□□ 0.57
NCAM1-220ENST00000613217 PTCH1Q13635 1447 aa18.6■□□□□ 0.57
NCAM1-220ENST00000613217 KIF1BO60333 1816 aa18.6■□□□□ 0.57
NCAM1-220ENST00000613217 TRIM52Q96A61 297 aa18.59■□□□□ 0.57
NCAM1-220ENST00000613217 NHSL1Q5SYE7 1610 aa18.59■□□□□ 0.57
NCAM1-220ENST00000613217 NAIPQ13075 1403 aa18.58■□□□□ 0.57
NCAM1-220ENST00000613217 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
NCAM1-220ENST00000613217 AFF2P51816 1311 aa18.57■□□□□ 0.56
NCAM1-220ENST00000613217 PRAG1Q86YV5 1406 aa18.56■□□□□ 0.56
NCAM1-220ENST00000613217 SETD1AO15047 1707 aaKnown RBP18.55■□□□□ 0.56
NCAM1-220ENST00000613217 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
NCAM1-220ENST00000613217 UPF1Q92900 1129 aaKnown RBP eCLIP18.55■□□□□ 0.56
NCAM1-220ENST00000613217 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
NCAM1-220ENST00000613217 HFM1A2PYH4 1435 aa18.55■□□□□ 0.56
NCAM1-220ENST00000613217 RBM6P78332 1123 aaKnown RBP18.54■□□□□ 0.56
NCAM1-220ENST00000613217 NGLY1Q96IV0 654 aa18.54■□□□□ 0.56
NCAM1-220ENST00000613217 PNPLA6Q8IY17 1366 aa18.54■□□□□ 0.56
NCAM1-220ENST00000613217 ACIN1Q9UKV3 1341 aaKnown RBP18.53■□□□□ 0.56
NCAM1-220ENST00000613217 C1orf167Q5SNV9 1468 aa18.53■□□□□ 0.56
NCAM1-220ENST00000613217 C8orf37Q96NL8 207 aa18.52■□□□□ 0.56
NCAM1-220ENST00000613217 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
NCAM1-220ENST00000613217 NALCNQ8IZF0 1738 aa18.51■□□□□ 0.55
NCAM1-220ENST00000613217 FOXD1Q16676 465 aa18.5■□□□□ 0.55
NCAM1-220ENST00000613217 SOS2Q07890 1332 aaPredicted RBP18.49■□□□□ 0.55
NCAM1-220ENST00000613217 LAMC1P11047 1609 aa18.49■□□□□ 0.55
NCAM1-220ENST00000613217 ROBO2Q9HCK4 1378 aa18.48■□□□□ 0.55
NCAM1-220ENST00000613217 NPHP3Q7Z494 1330 aa18.48■□□□□ 0.55
NCAM1-220ENST00000613217 LRPPRCP42704 1394 aaKnown RBP18.47■□□□□ 0.55
NCAM1-220ENST00000613217 CCDC144AA2RUR9 1427 aa18.46■□□□□ 0.55
NCAM1-220ENST00000613217 ANKRD30BQ9BXX2 1392 aa18.45■□□□□ 0.54
NCAM1-220ENST00000613217 ADAMTS2O95450 1211 aa18.45■□□□□ 0.54
NCAM1-220ENST00000613217 TRPC5Q9UL62 973 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms