RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 NOS1P29475 1434 aa27.03■■□□□ 1.92
CSNK1E-215ENST00000612795 GCC2Q8IWJ2 1684 aa27.03■■□□□ 1.92
CSNK1E-215ENST00000612795 FGD6Q6ZV73 1430 aa27.01■■□□□ 1.91
CSNK1E-215ENST00000612795 CHIC2Q9UKJ5 165 aa27■■□□□ 1.91
CSNK1E-215ENST00000612795 JCADQ9P266 1359 aa26.98■■□□□ 1.91
CSNK1E-215ENST00000612795 APLP2Q06481 763 aa26.98■■□□□ 1.91
CSNK1E-215ENST00000612795 LOC105371045A0A1W2PR82 267 aa26.97■■□□□ 1.91
CSNK1E-215ENST00000612795 COL16A1Q07092 1604 aaPredicted RBP26.97■■□□□ 1.91
CSNK1E-215ENST00000612795 SLC52A1Q9NWF4 448 aa26.96■■□□□ 1.91
CSNK1E-215ENST00000612795 SLAIN2Q9P270 581 aa26.95■■□□□ 1.9
CSNK1E-215ENST00000612795 RPRD2Q5VT52 1461 aaKnown RBP26.94■■□□□ 1.9
CSNK1E-215ENST00000612795 ZFYVE9O95405 1425 aa26.92■■□□□ 1.9
CSNK1E-215ENST00000612795 PPP1R15AO75807 674 aaPredicted RBP26.92■■□□□ 1.9
CSNK1E-215ENST00000612795 PLEKHG1Q9ULL1 1385 aa26.92■■□□□ 1.9
CSNK1E-215ENST00000612795 TMEM131LA2VDJ0 1609 aa26.9■■□□□ 1.9
CSNK1E-215ENST00000612795 ADGRL2O95490 1459 aa26.9■■□□□ 1.9
CSNK1E-215ENST00000612795 RIMS2Q9UQ26 1411 aa26.9■■□□□ 1.9
CSNK1E-215ENST00000612795 SHPRHQ149N8 1683 aa26.87■■□□□ 1.89
CSNK1E-215ENST00000612795 C14orf37Q86TY3 774 aa26.87■■□□□ 1.89
CSNK1E-215ENST00000612795 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.87■■□□□ 1.89
CSNK1E-215ENST00000612795 HDGFP51858 240 aaKnown RBP26.86■■□□□ 1.89
CSNK1E-215ENST00000612795 LRP6O75581 1613 aa26.86■■□□□ 1.89
CSNK1E-215ENST00000612795 MEX3CQ5U5Q3 659 aaKnown RBP26.85■■□□□ 1.89
CSNK1E-215ENST00000612795 AHDC1Q5TGY3 1603 aaPredicted RBP26.84■■□□□ 1.89
CSNK1E-215ENST00000612795 DIP2AQ14689 1571 aa26.84■■□□□ 1.89
CSNK1E-215ENST00000612795 ANKRD50Q9ULJ7 1429 aa26.83■■□□□ 1.89
CSNK1E-215ENST00000612795 NCOA3Q9Y6Q9 1424 aa26.83■■□□□ 1.89
CSNK1E-215ENST00000612795 SPATA31A6Q5VVP1 1343 aa26.83■■□□□ 1.89
CSNK1E-215ENST00000612795 UNC13BO14795 1591 aa26.8■■□□□ 1.88
CSNK1E-215ENST00000612795 E9PCH4 1651 aa26.79■■□□□ 1.88
CSNK1E-215ENST00000612795 CHGAP10645 457 aaKnown RBP26.79■■□□□ 1.88
CSNK1E-215ENST00000612795 TBX22Q9Y458 520 aa26.79■■□□□ 1.88
CSNK1E-215ENST00000612795 ZNF772Q68DY9 489 aaPredicted RBP26.78■■□□□ 1.88
CSNK1E-215ENST00000612795 FAM50AQ14320 339 aaKnown RBP26.77■■□□□ 1.88
CSNK1E-215ENST00000612795 CADPS2Q86UW7 1296 aa26.77■■□□□ 1.88
CSNK1E-215ENST00000612795 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.77■■□□□ 1.88
CSNK1E-215ENST00000612795 ATF3P18847 181 aa26.76■■□□□ 1.87
CSNK1E-215ENST00000612795 TRIM52Q96A61 297 aa26.76■■□□□ 1.87
CSNK1E-215ENST00000612795 TRPM2O94759 1503 aa26.75■■□□□ 1.87
CSNK1E-215ENST00000612795 ADAMTS13Q76LX8 1427 aa26.75■■□□□ 1.87
CSNK1E-215ENST00000612795 PIK3R4Q99570 1358 aa26.73■■□□□ 1.87
CSNK1E-215ENST00000612795 C19orf44Q9H6X5 657 aa26.73■■□□□ 1.87
CSNK1E-215ENST00000612795 NUTM2DQ5VT03 806 aaPredicted RBP26.72■■□□□ 1.87
CSNK1E-215ENST00000612795 UPF1Q92900 1129 aaKnown RBP eCLIP26.71■■□□□ 1.87
CSNK1E-215ENST00000612795 IQGAP3Q86VI3 1631 aa26.7■■□□□ 1.86
CSNK1E-215ENST00000612795 NHSL1Q5SYE7 1610 aa26.66■■□□□ 1.86
CSNK1E-215ENST00000612795 ASXL1Q8IXJ9 1541 aa26.65■■□□□ 1.86
CSNK1E-215ENST00000612795 XRN1Q8IZH2 1706 aaKnown RBP26.65■■□□□ 1.86
CSNK1E-215ENST00000612795 NUTM2BA6NNL0 878 aaPredicted RBP26.65■■□□□ 1.86
CSNK1E-215ENST00000612795 NUTM2EB1AL46 878 aaPredicted RBP26.65■■□□□ 1.86
CSNK1E-215ENST00000612795 RXRBP28702 533 aa26.65■■□□□ 1.86
CSNK1E-215ENST00000612795 NUTM2AQ8IVF1 878 aaPredicted RBP26.65■■□□□ 1.86
CSNK1E-215ENST00000612795 DCCP43146 1447 aa26.65■■□□□ 1.86
CSNK1E-215ENST00000612795 CDK12Q9NYV4 1490 aaPredicted RBP26.64■■□□□ 1.86
CSNK1E-215ENST00000612795 BRINP3Q76B58 766 aa26.64■■□□□ 1.86
CSNK1E-215ENST00000612795 AMOTL2Q9Y2J4 779 aa26.63■■□□□ 1.85
CSNK1E-215ENST00000612795 PTPRUQ92729 1446 aa26.62■■□□□ 1.85
CSNK1E-215ENST00000612795 NRXN3Q9Y4C0 1643 aa26.61■■□□□ 1.85
CSNK1E-215ENST00000612795 SPHKAPQ2M3C7 1700 aa26.59■■□□□ 1.85
CSNK1E-215ENST00000612795 AFF2P51816 1311 aa26.58■■□□□ 1.85
CSNK1E-215ENST00000612795 SETBP1Q9Y6X0 1596 aa26.58■■□□□ 1.85
CSNK1E-215ENST00000612795 MST1RQ04912 1400 aa26.56■■□□□ 1.84
CSNK1E-215ENST00000612795 SETD5Q9C0A6 1442 aa26.56■■□□□ 1.84
CSNK1E-215ENST00000612795 NALCNQ8IZF0 1738 aa26.54■■□□□ 1.84
CSNK1E-215ENST00000612795 ROCK1Q13464 1354 aa26.53■■□□□ 1.84
CSNK1E-215ENST00000612795 NUP155O75694 1391 aa26.52■■□□□ 1.84
CSNK1E-215ENST00000612795 RGS12O14924 1447 aa26.5■■□□□ 1.83
CSNK1E-215ENST00000612795 LRRC59Q96AG4 307 aaKnown RBP26.49■■□□□ 1.83
CSNK1E-215ENST00000612795 C8orf37Q96NL8 207 aa26.49■■□□□ 1.83
CSNK1E-215ENST00000612795 ADGRL3Q9HAR2 1447 aa26.48■■□□□ 1.83
CSNK1E-215ENST00000612795 ZNF326Q5BKZ1 582 aaKnown RBP26.46■■□□□ 1.83
CSNK1E-215ENST00000612795 PNPLA6Q8IY17 1366 aa26.46■■□□□ 1.83
CSNK1E-215ENST00000612795 METP08581 1390 aa26.45■■□□□ 1.82
CSNK1E-215ENST00000612795 RBM6P78332 1123 aaKnown RBP26.44■■□□□ 1.82
CSNK1E-215ENST00000612795 DDX17Q92841 729 aaKnown RBP26.43■■□□□ 1.82
CSNK1E-215ENST00000612795 QTRT2Q9H974 415 aaKnown RBP26.43■■□□□ 1.82
CSNK1E-215ENST00000612795 KIF1BO60333 1816 aa26.43■■□□□ 1.82
CSNK1E-215ENST00000612795 NEXMIFQ5QGS0 1516 aa26.4■■□□□ 1.82
CSNK1E-215ENST00000612795 LAMC1P11047 1609 aa26.4■■□□□ 1.82
CSNK1E-215ENST00000612795 CLTCL1P53675 1640 aa26.4■■□□□ 1.82
CSNK1E-215ENST00000612795 ITGAEP38570 1179 aa26.38■■□□□ 1.81
CSNK1E-215ENST00000612795 ADAMTS2O95450 1211 aa26.37■■□□□ 1.81
CSNK1E-215ENST00000612795 NGLY1Q96IV0 654 aa26.37■■□□□ 1.81
CSNK1E-215ENST00000612795 C1orf167Q5SNV9 1468 aa26.36■■□□□ 1.81
CSNK1E-215ENST00000612795 ATAD2Q6PL18 1390 aa26.33■■□□□ 1.81
CSNK1E-215ENST00000612795 PTCH1Q13635 1447 aa26.31■■□□□ 1.8
CSNK1E-215ENST00000612795 COL22A1Q8NFW1 1626 aaPredicted RBP26.29■■□□□ 1.8
CSNK1E-215ENST00000612795 USP21Q9UK80 565 aa26.29■■□□□ 1.8
CSNK1E-215ENST00000612795 MARF1Q9Y4F3 1742 aaKnown RBP26.28■■□□□ 1.8
CSNK1E-215ENST00000612795 SOS2Q07890 1332 aaPredicted RBP26.26■■□□□ 1.79
CSNK1E-215ENST00000612795 TRPC5Q9UL62 973 aaPredicted RBP26.26■■□□□ 1.79
CSNK1E-215ENST00000612795 ORAI2Q96SN7 254 aa26.24■■□□□ 1.79
CSNK1E-215ENST00000612795 ROBO2Q9HCK4 1378 aa26.23■■□□□ 1.79
CSNK1E-215ENST00000612795 FOXD1Q16676 465 aa26.23■■□□□ 1.79
CSNK1E-215ENST00000612795 PPLO60437 1756 aa26.21■■□□□ 1.79
CSNK1E-215ENST00000612795 ATRNO75882 1429 aa26.21■■□□□ 1.79
CSNK1E-215ENST00000612795 FNBP4Q8N3X1 1017 aaPredicted RBP26.19■■□□□ 1.78
CSNK1E-215ENST00000612795 HFM1A2PYH4 1435 aa26.19■■□□□ 1.78
CSNK1E-215ENST00000612795 PRAG1Q86YV5 1406 aa26.19■■□□□ 1.78
CSNK1E-215ENST00000612795 VGFO15240 615 aaPredicted RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms