RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-222ENST00000612341 SKAP1Q86WV1 359 aa17.06■□□□□ 0.32
SMTN-222ENST00000612341 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
SMTN-222ENST00000612341 NUTM2DQ5VT03 806 aaPredicted RBP17.05■□□□□ 0.32
SMTN-222ENST00000612341 SCAF11Q99590 1463 aaKnown RBP17.04■□□□□ 0.32
SMTN-222ENST00000612341 ASXL2Q76L83 1435 aa17.03■□□□□ 0.32
SMTN-222ENST00000612341 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
SMTN-222ENST00000612341 TNNT2P45379 298 aaPredicted RBP17.03■□□□□ 0.32
SMTN-222ENST00000612341 CLTCL1P53675 1640 aa17.02■□□□□ 0.32
SMTN-222ENST00000612341 CRBNQ96SW2 442 aa17.02■□□□□ 0.32
SMTN-222ENST00000612341 TRAK1Q9UPV9 953 aa17.02■□□□□ 0.32
SMTN-222ENST00000612341 TRPM2O94759 1503 aa17.02■□□□□ 0.32
SMTN-222ENST00000612341 C20orf194Q5TEA3 1177 aa17.02■□□□□ 0.31
SMTN-222ENST00000612341 PTPRTO14522 1441 aa17.02■□□□□ 0.31
SMTN-222ENST00000612341 MADDQ8WXG6 1647 aa17.01■□□□□ 0.31
SMTN-222ENST00000612341 PAK3O75914 559 aaPredicted RBP17.01■□□□□ 0.31
SMTN-222ENST00000612341 TMEM132EQ6IEE7 984 aa17■□□□□ 0.31
SMTN-222ENST00000612341 LAMC1P11047 1609 aa17■□□□□ 0.31
SMTN-222ENST00000612341 EIF3AQ14152 1382 aaKnown RBP17■□□□□ 0.31
SMTN-222ENST00000612341 ANP32AP39687 249 aaKnown RBP16.99■□□□□ 0.31
SMTN-222ENST00000612341 PLEKHH1Q9ULM0 1364 aa16.99■□□□□ 0.31
SMTN-222ENST00000612341 NBR1Q14596 966 aa16.98■□□□□ 0.31
SMTN-222ENST00000612341 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
SMTN-222ENST00000612341 BLMP54132 1417 aaPredicted RBP16.98■□□□□ 0.31
SMTN-222ENST00000612341 PKNOX2Q96KN3 472 aa16.98■□□□□ 0.31
SMTN-222ENST00000612341 APAF1O14727 1248 aa16.98■□□□□ 0.31
SMTN-222ENST00000612341 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
SMTN-222ENST00000612341 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
SMTN-222ENST00000612341 CARD14Q9BXL6 1004 aa16.97■□□□□ 0.31
SMTN-222ENST00000612341 RTN4Q9NQC3 1192 aaKnown RBP16.97■□□□□ 0.31
SMTN-222ENST00000612341 SPHKAPQ2M3C7 1700 aa16.96■□□□□ 0.31
SMTN-222ENST00000612341 RNF17Q9BXT8 1623 aaKnown RBP16.96■□□□□ 0.31
SMTN-222ENST00000612341 RAPGEF3O95398 923 aa16.96■□□□□ 0.31
SMTN-222ENST00000612341 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
SMTN-222ENST00000612341 SAFB2Q14151 953 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMTN-222ENST00000612341 NEUROD2Q15784 382 aa16.94■□□□□ 0.3
SMTN-222ENST00000612341 CFAP65Q6ZU64 1925 aaKnown RBP16.94■□□□□ 0.3
SMTN-222ENST00000612341 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
SMTN-222ENST00000612341 NOS1P29475 1434 aa16.94■□□□□ 0.3
SMTN-222ENST00000612341 SLC12A5Q9H2X9 1139 aa16.93■□□□□ 0.3
SMTN-222ENST00000612341 ARAP3Q8WWN8 1544 aa16.93■□□□□ 0.3
SMTN-222ENST00000612341 TET3O43151 1660 aa16.93■□□□□ 0.3
SMTN-222ENST00000612341 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
SMTN-222ENST00000612341 ASXL1Q8IXJ9 1541 aa16.92■□□□□ 0.3
SMTN-222ENST00000612341 INO80Q9ULG1 1556 aaPredicted RBP16.91■□□□□ 0.3
SMTN-222ENST00000612341 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
SMTN-222ENST00000612341 IQGAP1P46940 1657 aa16.91■□□□□ 0.3
SMTN-222ENST00000612341 CENPJQ9HC77 1338 aaPredicted RBP16.91■□□□□ 0.3
SMTN-222ENST00000612341 ABCA9Q8IUA7 1624 aa16.91■□□□□ 0.3
SMTN-222ENST00000612341 PDE4AP27815 886 aa16.91■□□□□ 0.3
SMTN-222ENST00000612341 CEP152O94986 1710 aa16.91■□□□□ 0.3
SMTN-222ENST00000612341 IPO9Q96P70 1041 aaKnown RBP16.9■□□□□ 0.3
SMTN-222ENST00000612341 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
SMTN-222ENST00000612341 CD109Q6YHK3 1445 aa16.9■□□□□ 0.3
SMTN-222ENST00000612341 ZMYM4Q5VZL5 1548 aa16.9■□□□□ 0.3
SMTN-222ENST00000612341 TCERG1O14776 1098 aaKnown RBP16.89■□□□□ 0.29
SMTN-222ENST00000612341 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
SMTN-222ENST00000612341 ERVK-7P63135 1459 aa16.88■□□□□ 0.29
SMTN-222ENST00000612341 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
SMTN-222ENST00000612341 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
SMTN-222ENST00000612341 DAXXQ9UER7 740 aaPredicted RBP16.88■□□□□ 0.29
SMTN-222ENST00000612341 RRP7AQ9Y3A4 280 aaKnown RBP16.88■□□□□ 0.29
SMTN-222ENST00000612341 IL27Q8NEV9 243 aa16.87■□□□□ 0.29
SMTN-222ENST00000612341 ZNF518AQ6AHZ1 1483 aa16.87■□□□□ 0.29
SMTN-222ENST00000612341 SYNMO15061 1565 aa16.87■□□□□ 0.29
SMTN-222ENST00000612341 BCAR3O75815 825 aa16.86■□□□□ 0.29
SMTN-222ENST00000612341 SLFN5Q08AF3 891 aa16.86■□□□□ 0.29
SMTN-222ENST00000612341 STK26Q9P289 416 aa16.86■□□□□ 0.29
SMTN-222ENST00000612341 MROH1Q8NDA8 1641 aa16.86■□□□□ 0.29
SMTN-222ENST00000612341 VWDEQ8N2E2 1590 aa16.86■□□□□ 0.29
SMTN-222ENST00000612341 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
SMTN-222ENST00000612341 NPATQ14207 1427 aa16.85■□□□□ 0.29
SMTN-222ENST00000612341 ZNF521Q96K83 1311 aa16.85■□□□□ 0.29
SMTN-222ENST00000612341 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
SMTN-222ENST00000612341 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
SMTN-222ENST00000612341 EFCAB6Q5THR3 1501 aa16.84■□□□□ 0.29
SMTN-222ENST00000612341 KIDINS220Q9ULH0 1771 aa16.84■□□□□ 0.29
SMTN-222ENST00000612341 INSRP06213 1382 aa16.84■□□□□ 0.29
SMTN-222ENST00000612341 MAP3K4Q9Y6R4 1608 aa16.84■□□□□ 0.29
SMTN-222ENST00000612341 PPRC1Q5VV67 1664 aaKnown RBP16.83■□□□□ 0.28
SMTN-222ENST00000612341 BACH2Q9BYV9 841 aa16.83■□□□□ 0.28
SMTN-222ENST00000612341 C14orf93Q9H972 538 aaKnown RBP16.83■□□□□ 0.28
SMTN-222ENST00000612341 NSD3Q9BZ95 1437 aa16.83■□□□□ 0.28
SMTN-222ENST00000612341 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.83■□□□□ 0.28
SMTN-222ENST00000612341 RGS3P49796 1198 aa16.81■□□□□ 0.28
SMTN-222ENST00000612341 CABP2Q9NPB3 220 aa16.81■□□□□ 0.28
SMTN-222ENST00000612341 MYOM2P54296 1465 aa16.81■□□□□ 0.28
SMTN-222ENST00000612341 KDM5AP29375 1690 aaKnown RBP16.81■□□□□ 0.28
SMTN-222ENST00000612341 MYOM1P52179 1685 aa16.8■□□□□ 0.28
SMTN-222ENST00000612341 NPC1L1Q9UHC9 1359 aa16.8■□□□□ 0.28
SMTN-222ENST00000612341 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
SMTN-222ENST00000612341 MROH2AA6NES4 1674 aa16.8■□□□□ 0.28
SMTN-222ENST00000612341 POGZQ7Z3K3 1410 aa16.79■□□□□ 0.28
SMTN-222ENST00000612341 KIF1BO60333 1816 aa16.79■□□□□ 0.28
SMTN-222ENST00000612341 MTHFSP49914 203 aa16.79■□□□□ 0.28
SMTN-222ENST00000612341 FRAT1Q92837 279 aaPredicted RBP16.79■□□□□ 0.28
SMTN-222ENST00000612341 LAS1LQ9Y4W2 734 aaKnown RBP16.78■□□□□ 0.28
SMTN-222ENST00000612341 E9PSI1 815 aa16.78■□□□□ 0.28
SMTN-222ENST00000612341 IDI1Q13907 227 aa16.78■□□□□ 0.28
SMTN-222ENST00000612341 MS4A1P11836 297 aa16.77■□□□□ 0.27
SMTN-222ENST00000612341 WWC1Q8IX03 1113 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms