RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 BACH2Q9BYV9 841 aa15.53■□□□□ 0.08
CDH1-212ENST00000611625 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
CDH1-212ENST00000611625 STK31Q9BXU1 1019 aa15.53■□□□□ 0.08
CDH1-212ENST00000611625 MINK1Q8N4C8 1332 aaPredicted RBP15.53■□□□□ 0.08
CDH1-212ENST00000611625 DDX11L8A8MPP1 907 aa15.52■□□□□ 0.08
CDH1-212ENST00000611625 CFAP70Q5T0N1 1121 aa15.52■□□□□ 0.08
CDH1-212ENST00000611625 ANKRD45Q5TZF3 282 aa15.52■□□□□ 0.08
CDH1-212ENST00000611625 FGD1P98174 961 aa15.52■□□□□ 0.08
CDH1-212ENST00000611625 AFAP1Q8N556 730 aa15.52■□□□□ 0.08
CDH1-212ENST00000611625 RPRD2Q5VT52 1461 aaKnown RBP15.52■□□□□ 0.07
CDH1-212ENST00000611625 MSH5O43196 834 aa15.51■□□□□ 0.07
CDH1-212ENST00000611625 AAMPQ13685 434 aa15.51■□□□□ 0.07
CDH1-212ENST00000611625 ERBINQ96RT1 1412 aa15.5■□□□□ 0.07
CDH1-212ENST00000611625 GOLGA6L4A6NEF3 574 aa15.5■□□□□ 0.07
CDH1-212ENST00000611625 DIAPH1O60610 1272 aaKnown RBP15.5■□□□□ 0.07
CDH1-212ENST00000611625 SLC4A10Q6U841 1118 aa15.5■□□□□ 0.07
CDH1-212ENST00000611625 KIAA1211Q6ZU35 1233 aa15.5■□□□□ 0.07
CDH1-212ENST00000611625 PTPRKQ15262 1439 aa15.5■□□□□ 0.07
CDH1-212ENST00000611625 RIPK4P57078 832 aa15.49■□□□□ 0.07
CDH1-212ENST00000611625 CAMSAP2Q08AD1 1489 aa15.49■□□□□ 0.07
CDH1-212ENST00000611625 TCP11L2Q8N4U5 519 aa15.49■□□□□ 0.07
CDH1-212ENST00000611625 A0A0G2JS52 829 aa15.48■□□□□ 0.07
CDH1-212ENST00000611625 MTHFSP49914 203 aa15.47■□□□□ 0.07
CDH1-212ENST00000611625 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
CDH1-212ENST00000611625 TRIM6-TRIM34B2RNG4 842 aa15.46■□□□□ 0.07
CDH1-212ENST00000611625 ST18O60284 1047 aa15.46■□□□□ 0.07
CDH1-212ENST00000611625 PDE3AQ14432 1141 aa15.46■□□□□ 0.07
CDH1-212ENST00000611625 TMEM132EQ6IEE7 984 aa15.46■□□□□ 0.07
CDH1-212ENST00000611625 CHMP5Q9NZZ3 219 aa15.46■□□□□ 0.07
CDH1-212ENST00000611625 PLEKHH2Q8IVE3 1493 aa15.46■□□□□ 0.07
CDH1-212ENST00000611625 KIF16BQ96L93 1317 aa15.46■□□□□ 0.06
CDH1-212ENST00000611625 BCAR3O75815 825 aa15.45■□□□□ 0.06
CDH1-212ENST00000611625 SYAP1Q96A49 352 aaPredicted RBP15.45■□□□□ 0.06
CDH1-212ENST00000611625 COG3Q96JB2 828 aa15.45■□□□□ 0.06
CDH1-212ENST00000611625 GGNBP2Q9H3C7 697 aa15.44■□□□□ 0.06
CDH1-212ENST00000611625 NAP1L2Q9ULW6 460 aaPredicted RBP15.44■□□□□ 0.06
CDH1-212ENST00000611625 SCAPERQ9BY12 1400 aa15.43■□□□□ 0.06
CDH1-212ENST00000611625 C22orf23Q9BZE7 217 aa15.43■□□□□ 0.06
CDH1-212ENST00000611625 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
CDH1-212ENST00000611625 NUTM2FA1L443 756 aa15.43■□□□□ 0.06
CDH1-212ENST00000611625 CHMP4AQ9BY43 222 aa15.42■□□□□ 0.06
CDH1-212ENST00000611625 LNPKQ9C0E8 428 aa15.42■□□□□ 0.06
CDH1-212ENST00000611625 PLB1Q6P1J6 1458 aa15.42■□□□□ 0.06
CDH1-212ENST00000611625 ARHGEF11O15085 1522 aa15.42■□□□□ 0.06
CDH1-212ENST00000611625 CABP2Q9NPB3 220 aa15.42■□□□□ 0.06
CDH1-212ENST00000611625 DDX49Q9Y6V7 483 aaKnown RBP15.42■□□□□ 0.06
CDH1-212ENST00000611625 CHAF1AQ13111 956 aaPredicted RBP15.42■□□□□ 0.06
CDH1-212ENST00000611625 NOL8Q76FK4 1167 aaKnown RBP15.42■□□□□ 0.06
CDH1-212ENST00000611625 API5Q9BZZ5 524 aaKnown RBP15.42■□□□□ 0.06
CDH1-212ENST00000611625 AMPHP49418 695 aa15.41■□□□□ 0.06
CDH1-212ENST00000611625 SKOR2Q2VWA4 1001 aaPredicted RBP15.41■□□□□ 0.06
CDH1-212ENST00000611625 NGDNQ8NEJ9 315 aaKnown RBP15.41■□□□□ 0.06
CDH1-212ENST00000611625 CCDC141Q6ZP82 1450 aa15.4■□□□□ 0.06
CDH1-212ENST00000611625 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
CDH1-212ENST00000611625 THOC2Q8NI27 1593 aaKnown RBP15.4■□□□□ 0.06
CDH1-212ENST00000611625 SLC12A5Q9H2X9 1139 aa15.39■□□□□ 0.05
CDH1-212ENST00000611625 PDZRN3Q9UPQ7 1066 aa15.39■□□□□ 0.05
CDH1-212ENST00000611625 UGGT2Q9NYU1 1516 aa15.39■□□□□ 0.05
CDH1-212ENST00000611625 KIAA2012Q0VF49 1180 aa15.39■□□□□ 0.05
CDH1-212ENST00000611625 RSPH6AQ9H0K4 717 aa15.39■□□□□ 0.05
CDH1-212ENST00000611625 GOLGA6L6A8MZA4 724 aa15.39■□□□□ 0.05
CDH1-212ENST00000611625 FRAT2O75474 233 aaPredicted RBP15.39■□□□□ 0.05
CDH1-212ENST00000611625 TAOK2Q9UL54 1235 aa15.38■□□□□ 0.05
CDH1-212ENST00000611625 GNAI1P63096 354 aa15.38■□□□□ 0.05
CDH1-212ENST00000611625 SLFN5Q08AF3 891 aa15.37■□□□□ 0.05
CDH1-212ENST00000611625 FOXD4L5Q5VV16 416 aaPredicted RBP15.37■□□□□ 0.05
CDH1-212ENST00000611625 FOXD4L4Q8WXT5 416 aaPredicted RBP15.37■□□□□ 0.05
CDH1-212ENST00000611625 NINLQ9Y2I6 1382 aa15.37■□□□□ 0.05
CDH1-212ENST00000611625 EXOSC9Q06265 439 aaKnown RBP15.36■□□□□ 0.05
CDH1-212ENST00000611625 DRC7Q8IY82 874 aa15.36■□□□□ 0.05
CDH1-212ENST00000611625 NRDCO43847 1150 aa15.36■□□□□ 0.05
CDH1-212ENST00000611625 HMOX1P09601 288 aa15.36■□□□□ 0.05
CDH1-212ENST00000611625 HDAC5Q9UQL6 1122 aa15.35■□□□□ 0.05
CDH1-212ENST00000611625 LTV1Q96GA3 475 aaPredicted RBP15.35■□□□□ 0.05
CDH1-212ENST00000611625 EID1Q9Y6B2 187 aa15.35■□□□□ 0.05
CDH1-212ENST00000611625 REC8O95072 547 aa15.35■□□□□ 0.05
CDH1-212ENST00000611625 CFAP43Q8NDM7 1665 aa15.35■□□□□ 0.05
CDH1-212ENST00000611625 GRIN2AQ12879 1464 aa15.35■□□□□ 0.05
CDH1-212ENST00000611625 GPATCH3Q96I76 525 aa15.35■□□□□ 0.05
CDH1-212ENST00000611625 RILPL2Q969X0 211 aa15.34■□□□□ 0.05
CDH1-212ENST00000611625 C20orf194Q5TEA3 1177 aa15.34■□□□□ 0.05
CDH1-212ENST00000611625 WDR63Q8IWG1 891 aa15.33■□□□□ 0.05
CDH1-212ENST00000611625 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.05
CDH1-212ENST00000611625 TSR2Q969E8 191 aaKnown RBP15.33■□□□□ 0.04
CDH1-212ENST00000611625 BRPF3Q9ULD4 1205 aa15.32■□□□□ 0.04
CDH1-212ENST00000611625 KIF14Q15058 1648 aa15.32■□□□□ 0.04
CDH1-212ENST00000611625 SKAP1Q86WV1 359 aa15.32■□□□□ 0.04
CDH1-212ENST00000611625 PHF14O94880 888 aa15.31■□□□□ 0.04
CDH1-212ENST00000611625 WWC1Q8IX03 1113 aa15.3■□□□□ 0.04
CDH1-212ENST00000611625 IL27Q8NEV9 243 aa15.3■□□□□ 0.04
CDH1-212ENST00000611625 CSPP1Q1MSJ5 1256 aa15.3■□□□□ 0.04
CDH1-212ENST00000611625 HTATSF1O43719 755 aaKnown RBP15.3■□□□□ 0.04
CDH1-212ENST00000611625 PRKAR2BP31323 418 aa15.29■□□□□ 0.04
CDH1-212ENST00000611625 INTS3Q68E01 1043 aaKnown RBP15.29■□□□□ 0.04
CDH1-212ENST00000611625 GPATCH8Q9UKJ3 1502 aaKnown RBP15.29■□□□□ 0.04
CDH1-212ENST00000611625 CDC45O75419 566 aa15.29■□□□□ 0.04
CDH1-212ENST00000611625 CT47B1P0C2W7 299 aaPredicted RBP15.29■□□□□ 0.04
CDH1-212ENST00000611625 MVPQ14764 893 aaKnown RBP15.29■□□□□ 0.04
CDH1-212ENST00000611625 TCOF1Q13428 1488 aaKnown RBP15.29■□□□□ 0.04
CDH1-212ENST00000611625 NUCB2P80303 420 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms