RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.44■■□□□ 1.5
HDDC2-210ENST00000609574 CHGAP10645 457 aaKnown RBP24.43■■□□□ 1.5
HDDC2-210ENST00000609574 NKTRP30414 1462 aaKnown RBP24.42■■□□□ 1.5
HDDC2-210ENST00000609574 TET3O43151 1660 aa24.42■■□□□ 1.5
HDDC2-210ENST00000609574 ADGRB3O60242 1522 aa24.41■■□□□ 1.5
HDDC2-210ENST00000609574 POTEAQ6S8J7 498 aa24.41■■□□□ 1.5
HDDC2-210ENST00000609574 RPRD2Q5VT52 1461 aaKnown RBP24.4■■□□□ 1.5
HDDC2-210ENST00000609574 ANKRD50Q9ULJ7 1429 aa24.4■■□□□ 1.5
HDDC2-210ENST00000609574 XIRP1Q702N8 1843 aaKnown RBP24.4■■□□□ 1.5
HDDC2-210ENST00000609574 PLEKHG1Q9ULL1 1385 aa24.39■■□□□ 1.49
HDDC2-210ENST00000609574 TBX22Q9Y458 520 aa24.38■■□□□ 1.49
HDDC2-210ENST00000609574 JCADQ9P266 1359 aa24.37■■□□□ 1.49
HDDC2-210ENST00000609574 ADGRL2O95490 1459 aa24.37■■□□□ 1.49
HDDC2-210ENST00000609574 RIMS2Q9UQ26 1411 aa24.36■■□□□ 1.49
HDDC2-210ENST00000609574 ROBO1Q9Y6N7 1651 aa24.36■■□□□ 1.49
HDDC2-210ENST00000609574 ATF3P18847 181 aa24.34■■□□□ 1.49
HDDC2-210ENST00000609574 MEX3CQ5U5Q3 659 aaKnown RBP24.33■■□□□ 1.49
HDDC2-210ENST00000609574 CADPS2Q86UW7 1296 aa24.33■■□□□ 1.49
HDDC2-210ENST00000609574 NCOA3Q9Y6Q9 1424 aa24.32■■□□□ 1.48
HDDC2-210ENST00000609574 NWD1Q149M9 1564 aa24.31■■□□□ 1.48
HDDC2-210ENST00000609574 C19orf44Q9H6X5 657 aa24.31■■□□□ 1.48
HDDC2-210ENST00000609574 ZFYVE9O95405 1425 aa24.3■■□□□ 1.48
HDDC2-210ENST00000609574 NUTM2DQ5VT03 806 aaPredicted RBP24.29■■□□□ 1.48
HDDC2-210ENST00000609574 ZNF772Q68DY9 489 aaPredicted RBP24.27■■□□□ 1.48
HDDC2-210ENST00000609574 SPATA31A6Q5VVP1 1343 aa24.27■■□□□ 1.48
HDDC2-210ENST00000609574 PHLPP1O60346 1717 aa24.24■■□□□ 1.47
HDDC2-210ENST00000609574 PIK3R4Q99570 1358 aa24.24■■□□□ 1.47
HDDC2-210ENST00000609574 AMOTL2Q9Y2J4 779 aa24.22■■□□□ 1.47
HDDC2-210ENST00000609574 NUP155O75694 1391 aa24.2■■□□□ 1.46
HDDC2-210ENST00000609574 CHD2O14647 1828 aaKnown RBP24.2■■□□□ 1.46
HDDC2-210ENST00000609574 TMEM131LA2VDJ0 1609 aa24.2■■□□□ 1.46
HDDC2-210ENST00000609574 ROCK1Q13464 1354 aa24.18■■□□□ 1.46
HDDC2-210ENST00000609574 ITGAEP38570 1179 aa24.17■■□□□ 1.46
HDDC2-210ENST00000609574 GCC2Q8IWJ2 1684 aa24.17■■□□□ 1.46
HDDC2-210ENST00000609574 ZNF326Q5BKZ1 582 aaKnown RBP24.16■■□□□ 1.46
HDDC2-210ENST00000609574 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
HDDC2-210ENST00000609574 TRIM52Q96A61 297 aa24.15■■□□□ 1.46
HDDC2-210ENST00000609574 DIP2AQ14689 1571 aa24.15■■□□□ 1.46
HDDC2-210ENST00000609574 NUTM2BA6NNL0 878 aaPredicted RBP24.14■■□□□ 1.45
HDDC2-210ENST00000609574 NUTM2EB1AL46 878 aaPredicted RBP24.14■■□□□ 1.45
HDDC2-210ENST00000609574 RXRBP28702 533 aa24.14■■□□□ 1.45
HDDC2-210ENST00000609574 NUTM2AQ8IVF1 878 aaPredicted RBP24.14■■□□□ 1.45
HDDC2-210ENST00000609574 BRINP3Q76B58 766 aa24.12■■□□□ 1.45
HDDC2-210ENST00000609574 MYO5BQ9ULV0 1848 aa24.12■■□□□ 1.45
HDDC2-210ENST00000609574 UNC13BO14795 1591 aa24.12■■□□□ 1.45
HDDC2-210ENST00000609574 TRPM2O94759 1503 aa24.11■■□□□ 1.45
HDDC2-210ENST00000609574 COL16A1Q07092 1604 aaPredicted RBP24.1■■□□□ 1.45
HDDC2-210ENST00000609574 LRRC59Q96AG4 307 aaKnown RBP24.08■■□□□ 1.45
HDDC2-210ENST00000609574 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.07■■□□□ 1.44
HDDC2-210ENST00000609574 AHDC1Q5TGY3 1603 aaPredicted RBP24.06■■□□□ 1.44
HDDC2-210ENST00000609574 E9PCH4 1651 aa24.06■■□□□ 1.44
HDDC2-210ENST00000609574 UPF1Q92900 1129 aaKnown RBP eCLIP24.06■■□□□ 1.44
HDDC2-210ENST00000609574 DCCP43146 1447 aa24.06■■□□□ 1.44
HDDC2-210ENST00000609574 LRP6O75581 1613 aa24.06■■□□□ 1.44
HDDC2-210ENST00000609574 IQGAP3Q86VI3 1631 aa24.04■■□□□ 1.44
HDDC2-210ENST00000609574 PTPRUQ92729 1446 aa24.03■■□□□ 1.44
HDDC2-210ENST00000609574 AFF2P51816 1311 aa24.01■■□□□ 1.43
HDDC2-210ENST00000609574 SHPRHQ149N8 1683 aa23.99■■□□□ 1.43
HDDC2-210ENST00000609574 SETD1AO15047 1707 aaKnown RBP23.98■■□□□ 1.43
HDDC2-210ENST00000609574 C8orf37Q96NL8 207 aa23.98■■□□□ 1.43
HDDC2-210ENST00000609574 SETD5Q9C0A6 1442 aa23.98■■□□□ 1.43
HDDC2-210ENST00000609574 ASXL1Q8IXJ9 1541 aa23.96■■□□□ 1.43
HDDC2-210ENST00000609574 METP08581 1390 aa23.96■■□□□ 1.43
HDDC2-210ENST00000609574 QTRT2Q9H974 415 aaKnown RBP23.96■■□□□ 1.43
HDDC2-210ENST00000609574 MST1RQ04912 1400 aa23.95■■□□□ 1.42
HDDC2-210ENST00000609574 VGFO15240 615 aaPredicted RBP23.94■■□□□ 1.42
HDDC2-210ENST00000609574 RBM6P78332 1123 aaKnown RBP23.94■■□□□ 1.42
HDDC2-210ENST00000609574 PPARGC1BQ86YN6 1023 aaKnown RBP23.94■■□□□ 1.42
HDDC2-210ENST00000609574 NGLY1Q96IV0 654 aa23.94■■□□□ 1.42
HDDC2-210ENST00000609574 SETBP1Q9Y6X0 1596 aa23.94■■□□□ 1.42
HDDC2-210ENST00000609574 CDK12Q9NYV4 1490 aaPredicted RBP23.94■■□□□ 1.42
HDDC2-210ENST00000609574 ADGRL3Q9HAR2 1447 aa23.92■■□□□ 1.42
HDDC2-210ENST00000609574 DDX17Q92841 729 aaKnown RBP23.91■■□□□ 1.42
HDDC2-210ENST00000609574 ADAMTS2O95450 1211 aa23.89■■□□□ 1.41
HDDC2-210ENST00000609574 XRN1Q8IZH2 1706 aaKnown RBP23.87■■□□□ 1.41
HDDC2-210ENST00000609574 PNPLA6Q8IY17 1366 aa23.87■■□□□ 1.41
HDDC2-210ENST00000609574 FOXD1Q16676 465 aa23.86■■□□□ 1.41
HDDC2-210ENST00000609574 SPHKAPQ2M3C7 1700 aa23.85■■□□□ 1.41
HDDC2-210ENST00000609574 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
HDDC2-210ENST00000609574 NRXN3Q9Y4C0 1643 aa23.84■■□□□ 1.41
HDDC2-210ENST00000609574 C1orf167Q5SNV9 1468 aa23.82■■□□□ 1.4
HDDC2-210ENST00000609574 USP21Q9UK80 565 aa23.82■■□□□ 1.4
HDDC2-210ENST00000609574 NHSL1Q5SYE7 1610 aa23.81■■□□□ 1.4
HDDC2-210ENST00000609574 ORAI2Q96SN7 254 aa23.81■■□□□ 1.4
HDDC2-210ENST00000609574 TRPC5Q9UL62 973 aaPredicted RBP23.81■■□□□ 1.4
HDDC2-210ENST00000609574 SLC4A1APQ9BWU0 796 aaKnown RBP23.79■■□□□ 1.4
HDDC2-210ENST00000609574 SOS2Q07890 1332 aaPredicted RBP23.79■■□□□ 1.4
HDDC2-210ENST00000609574 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
HDDC2-210ENST00000609574 PTCH1Q13635 1447 aa23.78■■□□□ 1.4
HDDC2-210ENST00000609574 RGS12O14924 1447 aa23.77■■□□□ 1.4
HDDC2-210ENST00000609574 ROBO2Q9HCK4 1378 aa23.77■■□□□ 1.4
HDDC2-210ENST00000609574 ESCO1Q5FWF5 840 aa23.76■■□□□ 1.39
HDDC2-210ENST00000609574 ATAD2Q6PL18 1390 aa23.76■■□□□ 1.39
HDDC2-210ENST00000609574 CLTCL1P53675 1640 aa23.75■■□□□ 1.39
HDDC2-210ENST00000609574 HFM1A2PYH4 1435 aa23.75■■□□□ 1.39
HDDC2-210ENST00000609574 NPHP3Q7Z494 1330 aa23.74■■□□□ 1.39
HDDC2-210ENST00000609574 FNBP4Q8N3X1 1017 aaPredicted RBP23.73■■□□□ 1.39
HDDC2-210ENST00000609574 KIF1BO60333 1816 aa23.73■■□□□ 1.39
HDDC2-210ENST00000609574 NAIPQ13075 1403 aa23.72■■□□□ 1.39
HDDC2-210ENST00000609574 NALCNQ8IZF0 1738 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms