RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 UQCRHP07919 91 aa16.01■□□□□ 0.15
CTCFL-218ENST00000608440 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.01■□□□□ 0.15
CTCFL-218ENST00000608440 ZSCAN20P17040 1043 aaPredicted RBP16■□□□□ 0.15
CTCFL-218ENST00000608440 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
CTCFL-218ENST00000608440 PREX2Q70Z35 1606 aa16■□□□□ 0.15
CTCFL-218ENST00000608440 MSNP26038 577 aaKnown RBP15.99■□□□□ 0.15
CTCFL-218ENST00000608440 GAS2L3Q86XJ1 694 aa15.99■□□□□ 0.15
CTCFL-218ENST00000608440 TNNT2P45379 298 aaPredicted RBP15.99■□□□□ 0.15
CTCFL-218ENST00000608440 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
CTCFL-218ENST00000608440 WDR7Q9Y4E6 1490 aa15.98■□□□□ 0.15
CTCFL-218ENST00000608440 NBPF8Q3BBV2 869 aa15.97■□□□□ 0.15
CTCFL-218ENST00000608440 ZSCAN30Q86W11 494 aa15.97■□□□□ 0.15
CTCFL-218ENST00000608440 TBC1D2Q9BYX2 928 aa15.97■□□□□ 0.15
CTCFL-218ENST00000608440 CDC42BPBQ9Y5S2 1711 aa15.96■□□□□ 0.15
CTCFL-218ENST00000608440 GCC2Q8IWJ2 1684 aa15.96■□□□□ 0.15
CTCFL-218ENST00000608440 SAMD9LQ8IVG5 1584 aa15.96■□□□□ 0.15
CTCFL-218ENST00000608440 KLHL34Q8N239 644 aa15.96■□□□□ 0.14
CTCFL-218ENST00000608440 KDM6BO15054 1643 aa15.95■□□□□ 0.14
CTCFL-218ENST00000608440 HNRNPMP52272 730 aaKnown RBP eCLIP15.95■□□□□ 0.14
CTCFL-218ENST00000608440 ASXL2Q76L83 1435 aa15.95■□□□□ 0.14
CTCFL-218ENST00000608440 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
CTCFL-218ENST00000608440 ROCK1Q13464 1354 aa15.94■□□□□ 0.14
CTCFL-218ENST00000608440 MYO5CQ9NQX4 1742 aa15.94■□□□□ 0.14
CTCFL-218ENST00000608440 ZBTB22O15209 634 aa15.94■□□□□ 0.14
CTCFL-218ENST00000608440 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
CTCFL-218ENST00000608440 PDE3BQ13370 1112 aa15.93■□□□□ 0.14
CTCFL-218ENST00000608440 CROCC2H7BZ55 1655 aa15.93■□□□□ 0.14
CTCFL-218ENST00000608440 LRPPRCP42704 1394 aaKnown RBP15.93■□□□□ 0.14
CTCFL-218ENST00000608440 TERF1P54274 439 aa15.93■□□□□ 0.14
CTCFL-218ENST00000608440 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
CTCFL-218ENST00000608440 SYCP2Q9BX26 1530 aa15.92■□□□□ 0.14
CTCFL-218ENST00000608440 CBX1P83916 185 aa15.92■□□□□ 0.14
CTCFL-218ENST00000608440 MTERF4Q7Z6M4 381 aaKnown RBP15.92■□□□□ 0.14
CTCFL-218ENST00000608440 CCDC94Q9BW85 323 aaPredicted RBP15.91■□□□□ 0.14
CTCFL-218ENST00000608440 C9orf84Q5VXU9 1444 aa15.91■□□□□ 0.14
CTCFL-218ENST00000608440 CYB5RLQ6IPT4 315 aa15.91■□□□□ 0.14
CTCFL-218ENST00000608440 MBD5Q9P267 1494 aa15.91■□□□□ 0.14
CTCFL-218ENST00000608440 PLCH2O75038 1416 aa15.9■□□□□ 0.14
CTCFL-218ENST00000608440 CCDC173Q0VFZ6 552 aa15.89■□□□□ 0.13
CTCFL-218ENST00000608440 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
CTCFL-218ENST00000608440 RIMBP3CA6NJZ7 1639 aa15.89■□□□□ 0.13
CTCFL-218ENST00000608440 RIMBP3BA6NNM3 1639 aa15.89■□□□□ 0.13
CTCFL-218ENST00000608440 RIMBP3Q9UFD9 1639 aa15.89■□□□□ 0.13
CTCFL-218ENST00000608440 ADGBQ8N7X0 1667 aa15.89■□□□□ 0.13
CTCFL-218ENST00000608440 CCDC141Q6ZP82 1450 aa15.89■□□□□ 0.13
CTCFL-218ENST00000608440 ISY1Q9ULR0 285 aaKnown RBP15.88■□□□□ 0.13
CTCFL-218ENST00000608440 ANKRD30AQ9BXX3 1397 aa15.88■□□□□ 0.13
CTCFL-218ENST00000608440 SHANK2Q9UPX8 1470 aa15.88■□□□□ 0.13
CTCFL-218ENST00000608440 CHMP5Q9NZZ3 219 aa15.88■□□□□ 0.13
CTCFL-218ENST00000608440 ADGRL2O95490 1459 aa15.88■□□□□ 0.13
CTCFL-218ENST00000608440 ARHGEF5Q12774 1597 aa15.88■□□□□ 0.13
CTCFL-218ENST00000608440 ZBTB7CA1YPR0 619 aa15.88■□□□□ 0.13
CTCFL-218ENST00000608440 DYNC1I1O14576 645 aa15.88■□□□□ 0.13
CTCFL-218ENST00000608440 TSPY4P0CV99 314 aa15.88■□□□□ 0.13
CTCFL-218ENST00000608440 TSPY10P0CW01 314 aa15.88■□□□□ 0.13
CTCFL-218ENST00000608440 NASPP49321 788 aaPredicted RBP15.87■□□□□ 0.13
CTCFL-218ENST00000608440 ZNF326Q5BKZ1 582 aaKnown RBP15.87■□□□□ 0.13
CTCFL-218ENST00000608440 EFCAB2Q5VUJ9 269 aa15.87■□□□□ 0.13
CTCFL-218ENST00000608440 KIF20AO95235 890 aa15.86■□□□□ 0.13
CTCFL-218ENST00000608440 UPF2Q9HAU5 1272 aaKnown RBP15.86■□□□□ 0.13
CTCFL-218ENST00000608440 DDX11L8A8MPP1 907 aa15.86■□□□□ 0.13
CTCFL-218ENST00000608440 IGSF3O75054 1194 aa15.86■□□□□ 0.13
CTCFL-218ENST00000608440 CDK11BP21127 795 aaKnown RBP15.86■□□□□ 0.13
CTCFL-218ENST00000608440 JARID2Q92833 1246 aaPredicted RBP15.85■□□□□ 0.13
CTCFL-218ENST00000608440 SPATA31E1Q6ZUB1 1445 aa15.85■□□□□ 0.13
CTCFL-218ENST00000608440 ARHGEF12Q9NZN5 1544 aa15.85■□□□□ 0.13
CTCFL-218ENST00000608440 FTSJ3Q8IY81 847 aaKnown RBP15.84■□□□□ 0.13
CTCFL-218ENST00000608440 CGNQ9P2M7 1197 aaKnown RBP15.84■□□□□ 0.13
CTCFL-218ENST00000608440 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
CTCFL-218ENST00000608440 ABCA9Q8IUA7 1624 aa15.84■□□□□ 0.13
CTCFL-218ENST00000608440 MYBBP1AQ9BQG0 1328 aaKnown RBP15.84■□□□□ 0.13
CTCFL-218ENST00000608440 PPP1R9BQ96SB3 815 aa15.83■□□□□ 0.13
CTCFL-218ENST00000608440 GTPBP4Q9BZE4 634 aaKnown RBP15.83■□□□□ 0.13
CTCFL-218ENST00000608440 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
CTCFL-218ENST00000608440 ZFP91Q96JP5 570 aaPredicted RBP15.83■□□□□ 0.12
CTCFL-218ENST00000608440 KIAA1107Q9UPP5 1409 aa15.83■□□□□ 0.12
CTCFL-218ENST00000608440 ABCC1P33527 1531 aa15.83■□□□□ 0.12
CTCFL-218ENST00000608440 LETM1O95202 739 aaPredicted RBP15.82■□□□□ 0.12
CTCFL-218ENST00000608440 IGHDP01880 384 aa15.82■□□□□ 0.12
CTCFL-218ENST00000608440 DNTTIP2Q5QJE6 756 aaKnown RBP15.82■□□□□ 0.12
CTCFL-218ENST00000608440 BRD4O60885 1362 aaPredicted RBP15.82■□□□□ 0.12
CTCFL-218ENST00000608440 ANKRD50Q9ULJ7 1429 aa15.82■□□□□ 0.12
CTCFL-218ENST00000608440 TSC1Q92574 1164 aa15.82■□□□□ 0.12
CTCFL-218ENST00000608440 E9PSI1 815 aa15.81■□□□□ 0.12
CTCFL-218ENST00000608440 TBC1D32Q96NH3 1257 aa15.81■□□□□ 0.12
CTCFL-218ENST00000608440 CHMP4AQ9BY43 222 aa15.81■□□□□ 0.12
CTCFL-218ENST00000608440 FANCAO15360 1455 aa15.81■□□□□ 0.12
CTCFL-218ENST00000608440 DENND4BO75064 1496 aaPredicted RBP15.8■□□□□ 0.12
CTCFL-218ENST00000608440 ARAP3Q8WWN8 1544 aa15.8■□□□□ 0.12
CTCFL-218ENST00000608440 TRAPPC8Q9Y2L5 1435 aa15.8■□□□□ 0.12
CTCFL-218ENST00000608440 PANK3Q9H999 370 aa15.8■□□□□ 0.12
CTCFL-218ENST00000608440 NLRP1Q9C000 1473 aa15.79■□□□□ 0.12
CTCFL-218ENST00000608440 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
CTCFL-218ENST00000608440 ATP2B3Q16720 1220 aa15.77■□□□□ 0.12
CTCFL-218ENST00000608440 SASS6Q6UVJ0 657 aa15.77■□□□□ 0.12
CTCFL-218ENST00000608440 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.77■□□□□ 0.12
CTCFL-218ENST00000608440 SPDYE4A6NLX3 237 aa15.77■□□□□ 0.11
CTCFL-218ENST00000608440 ZNF500O60304 480 aaPredicted RBP15.76■□□□□ 0.11
CTCFL-218ENST00000608440 AFAP1Q8N556 730 aa15.76■□□□□ 0.11
CTCFL-218ENST00000608440 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms