RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 RBM33Q96EV2 1170 aaKnown RBP28.69■■■□□ 2.18
NECAB3-220ENST00000606699 MSH6P52701 1360 aa28.69■■■□□ 2.18
NECAB3-220ENST00000606699 NWD1Q149M9 1564 aa28.69■■■□□ 2.18
NECAB3-220ENST00000606699 ANKRD50Q9ULJ7 1429 aa28.69■■■□□ 2.18
NECAB3-220ENST00000606699 PLEKHG1Q9ULL1 1385 aa28.67■■■□□ 2.18
NECAB3-220ENST00000606699 SLAIN2Q9P270 581 aa28.67■■■□□ 2.18
NECAB3-220ENST00000606699 FAM50AQ14320 339 aaKnown RBP28.66■■■□□ 2.18
NECAB3-220ENST00000606699 ROBO1Q9Y6N7 1651 aa28.66■■■□□ 2.18
NECAB3-220ENST00000606699 ZFYVE9O95405 1425 aa28.66■■■□□ 2.18
NECAB3-220ENST00000606699 PPP1R15AO75807 674 aaPredicted RBP28.63■■■□□ 2.17
NECAB3-220ENST00000606699 POTEAQ6S8J7 498 aa28.63■■■□□ 2.17
NECAB3-220ENST00000606699 TBX22Q9Y458 520 aa28.63■■■□□ 2.17
NECAB3-220ENST00000606699 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.62■■■□□ 2.17
NECAB3-220ENST00000606699 RIMS2Q9UQ26 1411 aa28.61■■■□□ 2.17
NECAB3-220ENST00000606699 NCOA3Q9Y6Q9 1424 aa28.61■■■□□ 2.17
NECAB3-220ENST00000606699 JCADQ9P266 1359 aa28.57■■■□□ 2.16
NECAB3-220ENST00000606699 CHD2O14647 1828 aaKnown RBP28.55■■■□□ 2.16
NECAB3-220ENST00000606699 TMEM131LA2VDJ0 1609 aa28.54■■■□□ 2.16
NECAB3-220ENST00000606699 PIK3R4Q99570 1358 aa28.51■■■□□ 2.16
NECAB3-220ENST00000606699 CHGAP10645 457 aaKnown RBP28.51■■■□□ 2.15
NECAB3-220ENST00000606699 GCC2Q8IWJ2 1684 aa28.49■■■□□ 2.15
NECAB3-220ENST00000606699 CADPS2Q86UW7 1296 aa28.49■■■□□ 2.15
NECAB3-220ENST00000606699 C19orf44Q9H6X5 657 aa28.49■■■□□ 2.15
NECAB3-220ENST00000606699 PHLPP1O60346 1717 aa28.49■■■□□ 2.15
NECAB3-220ENST00000606699 ROCK1Q13464 1354 aa28.49■■■□□ 2.15
NECAB3-220ENST00000606699 MYO5BQ9ULV0 1848 aa28.48■■■□□ 2.15
NECAB3-220ENST00000606699 UNC13BO14795 1591 aa28.47■■■□□ 2.15
NECAB3-220ENST00000606699 ADAMTS13Q76LX8 1427 aa28.47■■■□□ 2.15
NECAB3-220ENST00000606699 C14orf37Q86TY3 774 aa28.47■■■□□ 2.15
NECAB3-220ENST00000606699 SPATA31A6Q5VVP1 1343 aa28.45■■■□□ 2.15
NECAB3-220ENST00000606699 DIP2AQ14689 1571 aa28.45■■■□□ 2.14
NECAB3-220ENST00000606699 ATF3P18847 181 aa28.44■■■□□ 2.14
NECAB3-220ENST00000606699 NUTM2DQ5VT03 806 aaPredicted RBP28.42■■■□□ 2.14
NECAB3-220ENST00000606699 COL16A1Q07092 1604 aaPredicted RBP28.4■■■□□ 2.14
NECAB3-220ENST00000606699 E9PCH4 1651 aa28.4■■■□□ 2.14
NECAB3-220ENST00000606699 AMOTL2Q9Y2J4 779 aa28.39■■■□□ 2.14
NECAB3-220ENST00000606699 NUP155O75694 1391 aa28.38■■■□□ 2.13
NECAB3-220ENST00000606699 IQGAP3Q86VI3 1631 aa28.37■■■□□ 2.13
NECAB3-220ENST00000606699 ZNF772Q68DY9 489 aaPredicted RBP28.37■■■□□ 2.13
NECAB3-220ENST00000606699 TRPM2O94759 1503 aa28.35■■■□□ 2.13
NECAB3-220ENST00000606699 MEX3CQ5U5Q3 659 aaKnown RBP28.35■■■□□ 2.13
NECAB3-220ENST00000606699 AHDC1Q5TGY3 1603 aaPredicted RBP28.35■■■□□ 2.13
NECAB3-220ENST00000606699 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.35■■■□□ 2.13
NECAB3-220ENST00000606699 DCCP43146 1447 aa28.32■■■□□ 2.12
NECAB3-220ENST00000606699 BRINP3Q76B58 766 aa28.31■■■□□ 2.12
NECAB3-220ENST00000606699 PTPRUQ92729 1446 aa28.31■■■□□ 2.12
NECAB3-220ENST00000606699 LRP6O75581 1613 aa28.31■■■□□ 2.12
NECAB3-220ENST00000606699 SHPRHQ149N8 1683 aa28.26■■■□□ 2.12
NECAB3-220ENST00000606699 ITGAEP38570 1179 aa28.23■■■□□ 2.11
NECAB3-220ENST00000606699 SETBP1Q9Y6X0 1596 aa28.23■■■□□ 2.11
NECAB3-220ENST00000606699 ZNF326Q5BKZ1 582 aaKnown RBP28.22■■■□□ 2.11
NECAB3-220ENST00000606699 SETD1AO15047 1707 aaKnown RBP28.21■■■□□ 2.11
NECAB3-220ENST00000606699 RXRBP28702 533 aa28.21■■■□□ 2.11
NECAB3-220ENST00000606699 SETD5Q9C0A6 1442 aa28.2■■■□□ 2.11
NECAB3-220ENST00000606699 UPF1Q92900 1129 aaKnown RBP eCLIP28.2■■■□□ 2.1
NECAB3-220ENST00000606699 LRRC59Q96AG4 307 aaKnown RBP28.2■■■□□ 2.1
NECAB3-220ENST00000606699 MST1RQ04912 1400 aa28.18■■■□□ 2.1
NECAB3-220ENST00000606699 XRN1Q8IZH2 1706 aaKnown RBP28.18■■■□□ 2.1
NECAB3-220ENST00000606699 TRIM52Q96A61 297 aa28.18■■■□□ 2.1
NECAB3-220ENST00000606699 METP08581 1390 aa28.18■■■□□ 2.1
NECAB3-220ENST00000606699 NRXN3Q9Y4C0 1643 aa28.18■■■□□ 2.1
NECAB3-220ENST00000606699 ASXL1Q8IXJ9 1541 aa28.18■■■□□ 2.1
NECAB3-220ENST00000606699 NUTM2BA6NNL0 878 aaPredicted RBP28.17■■■□□ 2.1
NECAB3-220ENST00000606699 NUTM2EB1AL46 878 aaPredicted RBP28.17■■■□□ 2.1
NECAB3-220ENST00000606699 NUTM2AQ8IVF1 878 aaPredicted RBP28.17■■■□□ 2.1
NECAB3-220ENST00000606699 CDK12Q9NYV4 1490 aaPredicted RBP28.15■■■□□ 2.1
NECAB3-220ENST00000606699 SPHKAPQ2M3C7 1700 aa28.14■■■□□ 2.1
NECAB3-220ENST00000606699 ADGRL3Q9HAR2 1447 aa28.12■■■□□ 2.09
NECAB3-220ENST00000606699 AFF2P51816 1311 aa28.12■■■□□ 2.09
NECAB3-220ENST00000606699 NHSL1Q5SYE7 1610 aa28.08■■■□□ 2.09
NECAB3-220ENST00000606699 NEXMIFQ5QGS0 1516 aa28.06■■■□□ 2.08
NECAB3-220ENST00000606699 VGFO15240 615 aaPredicted RBP28.05■■■□□ 2.08
NECAB3-220ENST00000606699 PNPLA6Q8IY17 1366 aa28.05■■■□□ 2.08
NECAB3-220ENST00000606699 DDX17Q92841 729 aaKnown RBP28.03■■■□□ 2.08
NECAB3-220ENST00000606699 C8orf37Q96NL8 207 aa28.03■■■□□ 2.08
NECAB3-220ENST00000606699 QTRT2Q9H974 415 aaKnown RBP28.03■■■□□ 2.08
NECAB3-220ENST00000606699 RBM6P78332 1123 aaKnown RBP28.02■■■□□ 2.08
NECAB3-220ENST00000606699 CLTCL1P53675 1640 aa28.02■■■□□ 2.08
NECAB3-220ENST00000606699 PPARGC1BQ86YN6 1023 aaKnown RBP28.01■■■□□ 2.07
NECAB3-220ENST00000606699 C1orf167Q5SNV9 1468 aa28.01■■■□□ 2.07
NECAB3-220ENST00000606699 PTCH1Q13635 1447 aa28.01■■■□□ 2.07
NECAB3-220ENST00000606699 RPGRIP1LQ68CZ1 1315 aa27.99■■■□□ 2.07
NECAB3-220ENST00000606699 NAIPQ13075 1403 aa27.97■■■□□ 2.07
NECAB3-220ENST00000606699 NALCNQ8IZF0 1738 aa27.96■■■□□ 2.07
NECAB3-220ENST00000606699 NGLY1Q96IV0 654 aa27.96■■■□□ 2.07
NECAB3-220ENST00000606699 SOS2Q07890 1332 aaPredicted RBP27.95■■■□□ 2.07
NECAB3-220ENST00000606699 PRAG1Q86YV5 1406 aa27.95■■■□□ 2.07
NECAB3-220ENST00000606699 KIF1BO60333 1816 aa27.95■■■□□ 2.06
NECAB3-220ENST00000606699 RRBP1Q9P2E9 1410 aaKnown RBP27.94■■■□□ 2.06
NECAB3-220ENST00000606699 ROBO2Q9HCK4 1378 aa27.94■■■□□ 2.06
NECAB3-220ENST00000606699 LAMC1P11047 1609 aa27.93■■■□□ 2.06
NECAB3-220ENST00000606699 ORAI2Q96SN7 254 aa27.92■■■□□ 2.06
NECAB3-220ENST00000606699 RGS12O14924 1447 aa27.92■■■□□ 2.06
NECAB3-220ENST00000606699 ADAMTS2O95450 1211 aa27.91■■■□□ 2.06
NECAB3-220ENST00000606699 HFM1A2PYH4 1435 aa27.91■■■□□ 2.06
NECAB3-220ENST00000606699 FNBP4Q8N3X1 1017 aaPredicted RBP27.86■■■□□ 2.05
NECAB3-220ENST00000606699 SLC4A1APQ9BWU0 796 aaKnown RBP27.86■■■□□ 2.05
NECAB3-220ENST00000606699 USP21Q9UK80 565 aa27.86■■■□□ 2.05
NECAB3-220ENST00000606699 TRPC5Q9UL62 973 aaPredicted RBP27.86■■■□□ 2.05
NECAB3-220ENST00000606699 NPHP3Q7Z494 1330 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms