RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 SEMA3EO15041 775 aa9.96□□□□□ -0.82
LSM1P2-201ENST00000604911 SLC4A3P48751 1232 aa9.96□□□□□ -0.82
LSM1P2-201ENST00000604911 RBM46Q8TBY0 533 aaKnown RBP9.96□□□□□ -0.82
LSM1P2-201ENST00000604911 PRR14Q9BWN1 585 aa9.96□□□□□ -0.82
LSM1P2-201ENST00000604911 NUTM2FA1L443 756 aa9.95□□□□□ -0.82
LSM1P2-201ENST00000604911 ZPR1O75312 459 aa9.95□□□□□ -0.82
LSM1P2-201ENST00000604911 RCCD1A6NED2 376 aa9.93□□□□□ -0.82
LSM1P2-201ENST00000604911 GFRA3O60609 400 aa9.93□□□□□ -0.82
LSM1P2-201ENST00000604911 FAM161AQ3B820 660 aa9.93□□□□□ -0.82
LSM1P2-201ENST00000604911 PCDHB3Q9Y5E6 796 aa9.93□□□□□ -0.82
LSM1P2-201ENST00000604911 FCHSD2O94868 740 aa9.92□□□□□ -0.82
LSM1P2-201ENST00000604911 TMUB1Q9BVT8 246 aa9.92□□□□□ -0.82
LSM1P2-201ENST00000604911 BLOC1S3Q6QNY0 202 aa9.91□□□□□ -0.82
LSM1P2-201ENST00000604911 NRG2O14511 850 aaPredicted RBP9.9□□□□□ -0.82
LSM1P2-201ENST00000604911 GGCXP38435 758 aa9.9□□□□□ -0.82
LSM1P2-201ENST00000604911 TESPA1A2RU30 521 aaPredicted RBP9.89□□□□□ -0.83
LSM1P2-201ENST00000604911 ACTN4O43707 911 aaKnown RBP9.89□□□□□ -0.83
LSM1P2-201ENST00000604911 PXYLP1Q8TE99 480 aa9.89□□□□□ -0.83
LSM1P2-201ENST00000604911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.88□□□□□ -0.83
LSM1P2-201ENST00000604911 SLC10A3P09131 477 aa9.88□□□□□ -0.83
LSM1P2-201ENST00000604911 PLCB2Q00722 1185 aa9.87□□□□□ -0.83
LSM1P2-201ENST00000604911 CFHP08603 1231 aa9.86□□□□□ -0.83
LSM1P2-201ENST00000604911 HIC1Q14526 733 aa9.86□□□□□ -0.83
LSM1P2-201ENST00000604911 KMT5BQ4FZB7 885 aa9.86□□□□□ -0.83
LSM1P2-201ENST00000604911 TRAF7Q6Q0C0 670 aa9.86□□□□□ -0.83
LSM1P2-201ENST00000604911 EMID1Q96A84 441 aaPredicted RBP9.86□□□□□ -0.83
LSM1P2-201ENST00000604911 RNF223E7ERA6 249 aa9.85□□□□□ -0.83
LSM1P2-201ENST00000604911 TLL1O43897 1013 aa9.85□□□□□ -0.83
LSM1P2-201ENST00000604911 OATP04181 439 aa9.85□□□□□ -0.83
LSM1P2-201ENST00000604911 GPR37O15354 613 aa9.84□□□□□ -0.83
LSM1P2-201ENST00000604911 RBM26Q5T8P6 1007 aaKnown RBP9.84□□□□□ -0.83
LSM1P2-201ENST00000604911 METTL3Q86U44 580 aaKnown RBP9.84□□□□□ -0.83
LSM1P2-201ENST00000604911 PDZRN3Q9UPQ7 1066 aa9.82□□□□□ -0.84
LSM1P2-201ENST00000604911 FECHP22830 423 aa9.81□□□□□ -0.84
LSM1P2-201ENST00000604911 TRIM67Q6ZTA4 783 aa9.81□□□□□ -0.84
LSM1P2-201ENST00000604911 ANKLE1Q8NAG6 615 aa9.8□□□□□ -0.84
LSM1P2-201ENST00000604911 GNPATO15228 680 aa9.79□□□□□ -0.84
LSM1P2-201ENST00000604911 S1PR4O95977 384 aa9.79□□□□□ -0.84
LSM1P2-201ENST00000604911 SMYD5Q6GMV2 418 aa9.79□□□□□ -0.84
LSM1P2-201ENST00000604911 NR1I2O75469 434 aa9.78□□□□□ -0.84
LSM1P2-201ENST00000604911 ADH1BP00325 375 aa9.78□□□□□ -0.84
LSM1P2-201ENST00000604911 SLC19A1P41440 591 aa9.78□□□□□ -0.84
LSM1P2-201ENST00000604911 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
LSM1P2-201ENST00000604911 SPRYD7Q5W111 196 aa9.77□□□□□ -0.85
LSM1P2-201ENST00000604911 SCUBE3Q8IX30 993 aa9.76□□□□□ -0.85
LSM1P2-201ENST00000604911 LIAT1Q6ZQX7 453 aa9.75□□□□□ -0.85
LSM1P2-201ENST00000604911 ZNF598Q86UK7 904 aaKnown RBP9.74□□□□□ -0.85
LSM1P2-201ENST00000604911 PRR20EP86478 221 aa9.73□□□□□ -0.85
LSM1P2-201ENST00000604911 PRR20CP86479 221 aa9.73□□□□□ -0.85
LSM1P2-201ENST00000604911 PRR20DP86480 221 aa9.73□□□□□ -0.85
LSM1P2-201ENST00000604911 PRR20BP86481 221 aa9.73□□□□□ -0.85
LSM1P2-201ENST00000604911 PRR20AP86496 221 aa9.73□□□□□ -0.85
LSM1P2-201ENST00000604911 PUS10Q3MIT2 529 aaKnown RBP9.73□□□□□ -0.85
LSM1P2-201ENST00000604911 RSPH4AQ5TD94 716 aa9.73□□□□□ -0.85
LSM1P2-201ENST00000604911 PHOX2BQ99453 314 aa9.73□□□□□ -0.85
LSM1P2-201ENST00000604911 SLC6A16Q9GZN6 736 aa9.73□□□□□ -0.85
LSM1P2-201ENST00000604911 PLA2G2CQ5R387 149 aa9.72□□□□□ -0.85
LSM1P2-201ENST00000604911 MORN1Q5T089 497 aa9.7□□□□□ -0.86
LSM1P2-201ENST00000604911 SPSB2Q99619 263 aa9.7□□□□□ -0.86
LSM1P2-201ENST00000604911 GDF9O60383 454 aa9.69□□□□□ -0.86
LSM1P2-201ENST00000604911 NLRP7Q8WX94 980 aa9.69□□□□□ -0.86
LSM1P2-201ENST00000604911 THAP11Q96EK4 314 aa9.69□□□□□ -0.86
LSM1P2-201ENST00000604911 KDM2AQ9Y2K7 1162 aa9.69□□□□□ -0.86
LSM1P2-201ENST00000604911 GCGRP47871 477 aa9.68□□□□□ -0.86
LSM1P2-201ENST00000604911 FUT2Q10981 343 aa9.68□□□□□ -0.86
LSM1P2-201ENST00000604911 ZNF697Q5TEC3 545 aa9.68□□□□□ -0.86
LSM1P2-201ENST00000604911 RDH13Q8NBN7 331 aa9.68□□□□□ -0.86
LSM1P2-201ENST00000604911 DDX11L8A8MPP1 907 aa9.67□□□□□ -0.86
LSM1P2-201ENST00000604911 GPIHBP1Q8IV16 184 aa9.66□□□□□ -0.86
LSM1P2-201ENST00000604911 DGAT1O75907 488 aa9.65□□□□□ -0.86
LSM1P2-201ENST00000604911 ATP6V1AP38606 617 aa9.65□□□□□ -0.86
LSM1P2-201ENST00000604911 SULF1Q8IWU6 871 aa9.65□□□□□ -0.86
LSM1P2-201ENST00000604911 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
LSM1P2-201ENST00000604911 ZNF787Q6DD87 383 aa9.64□□□□□ -0.87
LSM1P2-201ENST00000604911 SLC27A5Q9Y2P5 690 aa9.64□□□□□ -0.87
LSM1P2-201ENST00000604911 SALL2Q9Y467 1007 aaPredicted RBP9.64□□□□□ -0.87
LSM1P2-201ENST00000604911 PKDCCQ504Y2 493 aa9.63□□□□□ -0.87
LSM1P2-201ENST00000604911 FAM160A2Q8N612 972 aaPredicted RBP9.63□□□□□ -0.87
LSM1P2-201ENST00000604911 TNFRSF10AO00220 468 aa9.62□□□□□ -0.87
LSM1P2-201ENST00000604911 PKD2L1Q9P0L9 805 aa9.62□□□□□ -0.87
LSM1P2-201ENST00000604911 FMNL1O95466 1100 aaPredicted RBP9.61□□□□□ -0.87
LSM1P2-201ENST00000604911 BRICD5Q6PL45 260 aa9.61□□□□□ -0.87
LSM1P2-201ENST00000604911 RPIAP49247 311 aa9.6□□□□□ -0.87
LSM1P2-201ENST00000604911 LMOD2Q6P5Q4 547 aa9.6□□□□□ -0.87
LSM1P2-201ENST00000604911 FCF1Q9Y324 198 aaKnown RBP9.59□□□□□ -0.87
LSM1P2-201ENST00000604911 CD46P15529 392 aa9.58□□□□□ -0.88
LSM1P2-201ENST00000604911 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
LSM1P2-201ENST00000604911 PRDM9Q9NQV7 894 aa9.58□□□□□ -0.88
LSM1P2-201ENST00000604911 FAM187AA6NFU0 413 aa9.57□□□□□ -0.88
LSM1P2-201ENST00000604911 MSS51Q4VC12 460 aa9.57□□□□□ -0.88
LSM1P2-201ENST00000604911 RNF19BQ6ZMZ0 732 aa9.57□□□□□ -0.88
LSM1P2-201ENST00000604911 ZNF775Q96BV0 537 aaPredicted RBP9.56□□□□□ -0.88
LSM1P2-201ENST00000604911 IRF6O14896 467 aa9.55□□□□□ -0.88
LSM1P2-201ENST00000604911 POTECB2RU33 542 aa9.54□□□□□ -0.88
LSM1P2-201ENST00000604911 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
LSM1P2-201ENST00000604911 TOR4AQ9NXH8 423 aa9.54□□□□□ -0.88
LSM1P2-201ENST00000604911 CD2BP2O95400 341 aaKnown RBP9.53□□□□□ -0.88
LSM1P2-201ENST00000604911 FOXC1Q12948 553 aa9.53□□□□□ -0.88
LSM1P2-201ENST00000604911 AAASQ9NRG9 546 aa9.53□□□□□ -0.88
LSM1P2-201ENST00000604911 MMP16P51512 607 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms