RNA–Protein interactions for RNA: ENST00000604860.3

UBE3A-206, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-206ENST00000604860 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.42□□□□□ -0.74
UBE3A-206ENST00000604860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.4□□□□□ -0.74
UBE3A-206ENST00000604860 RNF40O75150 1001 aa10.4□□□□□ -0.74
UBE3A-206ENST00000604860 PRKCSHP14314 528 aaPredicted RBP10.4□□□□□ -0.74
UBE3A-206ENST00000604860 HPS5Q9UPZ3 1129 aa10.4□□□□□ -0.74
UBE3A-206ENST00000604860 WBP1LQ9NX94 342 aa10.39□□□□□ -0.75
UBE3A-206ENST00000604860 REPIN1Q9BWE0 567 aaKnown RBP10.38□□□□□ -0.75
UBE3A-206ENST00000604860 MDM2Q00987 491 aaPredicted RBP10.37□□□□□ -0.75
UBE3A-206ENST00000604860 TRIM66O15016 1216 aa10.36□□□□□ -0.75
UBE3A-206ENST00000604860 SLC10A3P09131 477 aa10.35□□□□□ -0.75
UBE3A-206ENST00000604860 AK7Q96M32 723 aa10.35□□□□□ -0.75
UBE3A-206ENST00000604860 TSR3Q9UJK0 312 aaKnown RBP10.35□□□□□ -0.75
UBE3A-206ENST00000604860 HDGFP51858 240 aaKnown RBP10.34□□□□□ -0.75
UBE3A-206ENST00000604860 DAXXQ9UER7 740 aaPredicted RBP10.34□□□□□ -0.75
UBE3A-206ENST00000604860 SLF2Q8IX21 1173 aa10.33□□□□□ -0.76
UBE3A-206ENST00000604860 HCSTQ9UBK5 93 aa10.33□□□□□ -0.76
UBE3A-206ENST00000604860 PPP4CP60510 307 aa10.32□□□□□ -0.76
UBE3A-206ENST00000604860 TMUB1Q9BVT8 246 aa10.32□□□□□ -0.76
UBE3A-206ENST00000604860 DDX11L8A8MPP1 907 aa10.31□□□□□ -0.76
UBE3A-206ENST00000604860 APLP1P51693 650 aa10.31□□□□□ -0.76
UBE3A-206ENST00000604860 AMHR2Q16671 573 aa10.31□□□□□ -0.76
UBE3A-206ENST00000604860 PDE4DQ08499 809 aa10.29□□□□□ -0.76
UBE3A-206ENST00000604860 PARP9Q8IXQ6 854 aa10.29□□□□□ -0.76
UBE3A-206ENST00000604860 GPCPD1Q9NPB8 672 aa10.29□□□□□ -0.76
UBE3A-206ENST00000604860 TTLL12Q14166 644 aaPredicted RBP10.28□□□□□ -0.76
UBE3A-206ENST00000604860 CFHP08603 1231 aa10.27□□□□□ -0.77
UBE3A-206ENST00000604860 CLCN1P35523 988 aa10.27□□□□□ -0.77
UBE3A-206ENST00000604860 RDH13Q8NBN7 331 aa10.27□□□□□ -0.77
UBE3A-206ENST00000604860 FAM217BQ9NTX9 383 aaPredicted RBP10.27□□□□□ -0.77
UBE3A-206ENST00000604860 GIGYF2Q6Y7W6 1299 aaKnown RBP10.26□□□□□ -0.77
UBE3A-206ENST00000604860 CD46P15529 392 aa10.24□□□□□ -0.77
UBE3A-206ENST00000604860 SSTR3P32745 418 aaPredicted RBP10.23□□□□□ -0.77
UBE3A-206ENST00000604860 SLC4A3P48751 1232 aa10.23□□□□□ -0.77
UBE3A-206ENST00000604860 GPBP1L1Q9HC44 474 aaPredicted RBP10.23□□□□□ -0.77
UBE3A-206ENST00000604860 MS4A1P11836 297 aa10.22□□□□□ -0.77
UBE3A-206ENST00000604860 SULF1Q8IWU6 871 aa10.22□□□□□ -0.77
UBE3A-206ENST00000604860 GCGRP47871 477 aa10.21□□□□□ -0.77
UBE3A-206ENST00000604860 NYAP1Q6ZVC0 841 aa10.2□□□□□ -0.78
UBE3A-206ENST00000604860 ACTN4O43707 911 aaKnown RBP10.19□□□□□ -0.78
UBE3A-206ENST00000604860 PUS10Q3MIT2 529 aaKnown RBP10.19□□□□□ -0.78
UBE3A-206ENST00000604860 MTRQ99707 1265 aa10.19□□□□□ -0.78
UBE3A-206ENST00000604860 COPS2P61201 443 aa10.18□□□□□ -0.78
UBE3A-206ENST00000604860 FUT2Q10981 343 aa10.18□□□□□ -0.78
UBE3A-206ENST00000604860 KMT5BQ4FZB7 885 aa10.18□□□□□ -0.78
UBE3A-206ENST00000604860 TJAP1Q5JTD0 557 aa10.18□□□□□ -0.78
UBE3A-206ENST00000604860 BLOC1S3Q6QNY0 202 aa10.18□□□□□ -0.78
UBE3A-206ENST00000604860 ZNF516Q92618 1163 aa10.17□□□□□ -0.78
UBE3A-206ENST00000604860 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
UBE3A-206ENST00000604860 HLA-CQ95604 372 aa10.17□□□□□ -0.78
UBE3A-206ENST00000604860 RSPH4AQ5TD94 716 aa10.16□□□□□ -0.78
UBE3A-206ENST00000604860 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
UBE3A-206ENST00000604860 PCDHB3Q9Y5E6 796 aa10.16□□□□□ -0.78
UBE3A-206ENST00000604860 ITGBL1O95965 494 aaPredicted RBP10.15□□□□□ -0.78
UBE3A-206ENST00000604860 BEGAINQ9BUH8 593 aa10.15□□□□□ -0.78
UBE3A-206ENST00000604860 KDM4CQ9H3R0 1056 aa10.15□□□□□ -0.78
UBE3A-206ENST00000604860 BRPF1P55201 1214 aaPredicted RBP10.14□□□□□ -0.79
UBE3A-206ENST00000604860 PRR14Q9BWN1 585 aa10.13□□□□□ -0.79
UBE3A-206ENST00000604860 TLL1O43897 1013 aa10.12□□□□□ -0.79
UBE3A-206ENST00000604860 KDM4AO75164 1064 aa10.12□□□□□ -0.79
UBE3A-206ENST00000604860 NEUROD2Q15784 382 aa10.12□□□□□ -0.79
UBE3A-206ENST00000604860 MORN1Q5T089 497 aa10.12□□□□□ -0.79
UBE3A-206ENST00000604860 NKX2-3Q8TAU0 364 aa10.12□□□□□ -0.79
UBE3A-206ENST00000604860 SPIRE2Q8WWL2 714 aa10.12□□□□□ -0.79
UBE3A-206ENST00000604860 GUCA2AQ02747 115 aa10.11□□□□□ -0.79
UBE3A-206ENST00000604860 IL21Q9HBE4 155 aa10.11□□□□□ -0.79
UBE3A-206ENST00000604860 ATP6V1AP38606 617 aa10.1□□□□□ -0.79
UBE3A-206ENST00000604860 FAM117AQ9C073 453 aa10.1□□□□□ -0.79
UBE3A-206ENST00000604860 HOXA2O43364 376 aa10.09□□□□□ -0.79
UBE3A-206ENST00000604860 ZPR1O75312 459 aa10.09□□□□□ -0.79
UBE3A-206ENST00000604860 KCNC4Q03721 635 aa10.09□□□□□ -0.79
UBE3A-206ENST00000604860 SLC27A5Q9Y2P5 690 aa10.09□□□□□ -0.79
UBE3A-206ENST00000604860 NDUFV2P19404 249 aa10.08□□□□□ -0.8
UBE3A-206ENST00000604860 NUTM1Q86Y26 1132 aa10.08□□□□□ -0.8
UBE3A-206ENST00000604860 SCUBE3Q8IX30 993 aa10.08□□□□□ -0.8
UBE3A-206ENST00000604860 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
UBE3A-206ENST00000604860 MOXD2PA6NHM9 499 aa10.07□□□□□ -0.8
UBE3A-206ENST00000604860 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
UBE3A-206ENST00000604860 RNF19BQ6ZMZ0 732 aa10.06□□□□□ -0.8
UBE3A-206ENST00000604860 PCDHGC3Q9UN70 934 aa10.05□□□□□ -0.8
UBE3A-206ENST00000604860 NR1I2O75469 434 aa10.04□□□□□ -0.8
UBE3A-206ENST00000604860 USP46P62068 366 aa10.04□□□□□ -0.8
UBE3A-206ENST00000604860 THAP11Q96EK4 314 aa10.04□□□□□ -0.8
UBE3A-206ENST00000604860 IFFO2Q5TF58 517 aa10.03□□□□□ -0.8
UBE3A-206ENST00000604860 SYMPKQ92797 1274 aaKnown RBP10.03□□□□□ -0.8
UBE3A-206ENST00000604860 MYSM1Q5VVJ2 828 aa10.02□□□□□ -0.81
UBE3A-206ENST00000604860 FDX1P10109 184 aa10.01□□□□□ -0.81
UBE3A-206ENST00000604860 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
UBE3A-206ENST00000604860 BRICD5Q6PL45 260 aa10.01□□□□□ -0.81
UBE3A-206ENST00000604860 IL27Q8NEV9 243 aa10.01□□□□□ -0.81
UBE3A-206ENST00000604860 LIMD1Q9UGP4 676 aa10.01□□□□□ -0.81
UBE3A-206ENST00000604860 RSBN1LQ6PCB5 846 aaPredicted RBP10□□□□□ -0.81
UBE3A-206ENST00000604860 PCDHB15Q9Y5E8 787 aa10□□□□□ -0.81
UBE3A-206ENST00000604860 A0A0G2JS52 829 aa9.99□□□□□ -0.81
UBE3A-206ENST00000604860 ADH1BP00325 375 aa9.99□□□□□ -0.81
UBE3A-206ENST00000604860 FAM160A2Q8N612 972 aaPredicted RBP9.99□□□□□ -0.81
UBE3A-206ENST00000604860 SPSB2Q99619 263 aa9.99□□□□□ -0.81
UBE3A-206ENST00000604860 PRDM9Q9NQV7 894 aa9.99□□□□□ -0.81
UBE3A-206ENST00000604860 S1PR4O95977 384 aa9.98□□□□□ -0.81
UBE3A-206ENST00000604860 PPP1R18Q6NYC8 613 aa9.98□□□□□ -0.81
UBE3A-206ENST00000604860 RIC3Q7Z5B4 369 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms