RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 GPR153Q6NV75 609 aa7.49□□□□□ -1.21
AC004542.1-201ENST00000602955 KHSRPQ92945 711 aaKnown RBP eCLIP7.49□□□□□ -1.21
AC004542.1-201ENST00000602955 PSDA5PKW4 1024 aaPredicted RBP7.48□□□□□ -1.21
AC004542.1-201ENST00000602955 RIMBP2O15034 1052 aa7.48□□□□□ -1.21
AC004542.1-201ENST00000602955 NUTM1Q86Y26 1132 aa7.48□□□□□ -1.21
AC004542.1-201ENST00000602955 BCL2L12Q9HB09 334 aa7.48□□□□□ -1.21
AC004542.1-201ENST00000602955 ZNF330Q9Y3S2 320 aaPredicted RBP7.48□□□□□ -1.21
AC004542.1-201ENST00000602955 DNAJB2P25686 324 aa7.47□□□□□ -1.21
AC004542.1-201ENST00000602955 PPP4R3BQ5MIZ7 849 aa7.47□□□□□ -1.21
AC004542.1-201ENST00000602955 TRAIPQ9BWF2 469 aa7.47□□□□□ -1.21
AC004542.1-201ENST00000602955 TSKSQ9UJT2 592 aa7.47□□□□□ -1.21
AC004542.1-201ENST00000602955 MOXD2PA6NHM9 499 aa7.46□□□□□ -1.22
AC004542.1-201ENST00000602955 NBPF26B4DH59 902 aa7.46□□□□□ -1.22
AC004542.1-201ENST00000602955 PPP1R3GB7ZBB8 358 aa7.46□□□□□ -1.22
AC004542.1-201ENST00000602955 LILRB3O75022 631 aa7.46□□□□□ -1.22
AC004542.1-201ENST00000602955 WWC1Q8IX03 1113 aa7.46□□□□□ -1.22
AC004542.1-201ENST00000602955 NECTIN2Q92692 538 aa7.46□□□□□ -1.22
AC004542.1-201ENST00000602955 TMEM134Q9H6X4 195 aa7.46□□□□□ -1.22
AC004542.1-201ENST00000602955 GDPD2Q9HCC8 539 aa7.46□□□□□ -1.22
AC004542.1-201ENST00000602955 DDX11L8A8MPP1 907 aa7.45□□□□□ -1.22
AC004542.1-201ENST00000602955 NUDT18Q6ZVK8 323 aa7.45□□□□□ -1.22
AC004542.1-201ENST00000602955 LHX6Q9UPM6 363 aa7.45□□□□□ -1.22
AC004542.1-201ENST00000602955 C3orf80F5H4A9 247 aa7.44□□□□□ -1.22
AC004542.1-201ENST00000602955 RANGAP1P46060 587 aaPredicted RBP7.44□□□□□ -1.22
AC004542.1-201ENST00000602955 QPCTQ16769 361 aa7.44□□□□□ -1.22
AC004542.1-201ENST00000602955 TATDN2Q93075 761 aa7.44□□□□□ -1.22
AC004542.1-201ENST00000602955 PRM3Q9NNZ6 103 aa7.44□□□□□ -1.22
AC004542.1-201ENST00000602955 TRIM6-TRIM34B2RNG4 842 aa7.43□□□□□ -1.22
AC004542.1-201ENST00000602955 NDUFV2P19404 249 aa7.43□□□□□ -1.22
AC004542.1-201ENST00000602955 PTPREP23469 700 aa7.43□□□□□ -1.22
AC004542.1-201ENST00000602955 CSPP1Q1MSJ5 1256 aa7.43□□□□□ -1.22
AC004542.1-201ENST00000602955 PRPF38BQ5VTL8 546 aaKnown RBP7.43□□□□□ -1.22
AC004542.1-201ENST00000602955 PACS2Q86VP3 889 aa7.43□□□□□ -1.22
AC004542.1-201ENST00000602955 PNMA3Q9UL41 463 aa7.43□□□□□ -1.22
AC004542.1-201ENST00000602955 RTL5Q5HYW3 569 aaPredicted RBP7.42□□□□□ -1.22
AC004542.1-201ENST00000602955 PCDHB15Q9Y5E8 787 aa7.42□□□□□ -1.22
AC004542.1-201ENST00000602955 KDM4AO75164 1064 aa7.41□□□□□ -1.22
AC004542.1-201ENST00000602955 PPP1R15AO75807 674 aaPredicted RBP7.41□□□□□ -1.22
AC004542.1-201ENST00000602955 AP1G2O75843 785 aa7.41□□□□□ -1.22
AC004542.1-201ENST00000602955 ABL2P42684 1182 aa7.41□□□□□ -1.22
AC004542.1-201ENST00000602955 USP46P62068 366 aa7.41□□□□□ -1.22
AC004542.1-201ENST00000602955 ZNF710Q8N1W2 664 aa7.41□□□□□ -1.22
AC004542.1-201ENST00000602955 KCTD17Q8N5Z5 321 aa7.41□□□□□ -1.22
AC004542.1-201ENST00000602955 CCDC9Q9Y3X0 531 aaKnown RBP7.41□□□□□ -1.22
AC004542.1-201ENST00000602955 USP17L8P0C7I0 530 aa7.4□□□□□ -1.22
AC004542.1-201ENST00000602955 POTEJP0CG39 1038 aa7.4□□□□□ -1.22
AC004542.1-201ENST00000602955 TBC1D2BQ9UPU7 963 aa7.4□□□□□ -1.22
AC004542.1-201ENST00000602955 NUTM2BA6NNL0 878 aaPredicted RBP7.39□□□□□ -1.23
AC004542.1-201ENST00000602955 NUTM2EB1AL46 878 aaPredicted RBP7.39□□□□□ -1.23
AC004542.1-201ENST00000602955 GCGRP47871 477 aa7.39□□□□□ -1.23
AC004542.1-201ENST00000602955 NUTM2DQ5VT03 806 aaPredicted RBP7.39□□□□□ -1.23
AC004542.1-201ENST00000602955 NUTM2AQ8IVF1 878 aaPredicted RBP7.39□□□□□ -1.23
AC004542.1-201ENST00000602955 RDH13Q8NBN7 331 aa7.39□□□□□ -1.23
AC004542.1-201ENST00000602955 CABLES1Q8TDN4 633 aa7.39□□□□□ -1.23
AC004542.1-201ENST00000602955 CALR3Q96L12 384 aaKnown RBP7.39□□□□□ -1.23
AC004542.1-201ENST00000602955 POM121CA8CG34 1229 aa7.38□□□□□ -1.23
AC004542.1-201ENST00000602955 HOXA2O43364 376 aa7.38□□□□□ -1.23
AC004542.1-201ENST00000602955 NPM2Q86SE8 214 aaKnown RBP7.38□□□□□ -1.23
AC004542.1-201ENST00000602955 RETREG2Q8NC44 543 aa7.38□□□□□ -1.23
AC004542.1-201ENST00000602955 GLMNQ92990 594 aa7.38□□□□□ -1.23
AC004542.1-201ENST00000602955 GJD4Q96KN9 370 aaPredicted RBP7.38□□□□□ -1.23
AC004542.1-201ENST00000602955 ZBTB3Q9H5J0 574 aa7.38□□□□□ -1.23
AC004542.1-201ENST00000602955 RSPH4AQ5TD94 716 aa7.37□□□□□ -1.23
AC004542.1-201ENST00000602955 SMAPO00193 183 aa7.36□□□□□ -1.23
AC004542.1-201ENST00000602955 FDX1P10109 184 aa7.36□□□□□ -1.23
AC004542.1-201ENST00000602955 SP7Q8TDD2 431 aaPredicted RBP7.36□□□□□ -1.23
AC004542.1-201ENST00000602955 NDUFB9Q9Y6M9 179 aa7.36□□□□□ -1.23
AC004542.1-201ENST00000602955 IRF5Q13568 498 aa7.35□□□□□ -1.23
AC004542.1-201ENST00000602955 PROX2Q3B8N5 592 aa7.35□□□□□ -1.23
AC004542.1-201ENST00000602955 HOXB1P14653 301 aaPredicted RBP7.34□□□□□ -1.23
AC004542.1-201ENST00000602955 WASHC4Q2M389 1173 aa7.34□□□□□ -1.23
AC004542.1-201ENST00000602955 POTEHQ6S545 545 aa7.34□□□□□ -1.23
AC004542.1-201ENST00000602955 MAMSTRQ6ZN01 415 aa7.34□□□□□ -1.23
AC004542.1-201ENST00000602955 KCNK17Q96T54 332 aa7.34□□□□□ -1.23
AC004542.1-201ENST00000602955 SCUBE2Q9NQ36 999 aa7.34□□□□□ -1.23
AC004542.1-201ENST00000602955 PCDHGC3Q9UN70 934 aa7.34□□□□□ -1.23
AC004542.1-201ENST00000602955 GPR37L1O60883 481 aa7.33□□□□□ -1.24
AC004542.1-201ENST00000602955 SLC10A3P09131 477 aa7.33□□□□□ -1.24
AC004542.1-201ENST00000602955 PDE4CQ08493 712 aa7.33□□□□□ -1.24
AC004542.1-201ENST00000602955 KCNH8Q96L42 1107 aa7.33□□□□□ -1.24
AC004542.1-201ENST00000602955 TRIM34Q9BYJ4 488 aa7.33□□□□□ -1.24
AC004542.1-201ENST00000602955 KIAA1468Q9P260 1216 aa7.33□□□□□ -1.24
AC004542.1-201ENST00000602955 ACIN1Q9UKV3 1341 aaKnown RBP7.32□□□□□ -1.24
AC004542.1-201ENST00000602955 POTEB2H3BUK9 544 aa7.32□□□□□ -1.24
AC004542.1-201ENST00000602955 SNPHO15079 494 aa7.32□□□□□ -1.24
AC004542.1-201ENST00000602955 HDGFL1Q5TGJ6 251 aa7.32□□□□□ -1.24
AC004542.1-201ENST00000602955 AEBP1Q8IUX7 1158 aa7.32□□□□□ -1.24
AC004542.1-201ENST00000602955 ADAMTS19Q8TE59 1207 aa7.32□□□□□ -1.24
AC004542.1-201ENST00000602955 ZBED2Q9BTP6 218 aa7.32□□□□□ -1.24
AC004542.1-201ENST00000602955 HMX1Q9NP08 348 aaPredicted RBP7.32□□□□□ -1.24
AC004542.1-201ENST00000602955 CTDSPL2Q05D32 466 aa7.31□□□□□ -1.24
AC004542.1-201ENST00000602955 MTMR2Q13614 643 aa7.31□□□□□ -1.24
AC004542.1-201ENST00000602955 SWT1Q5T5J6 900 aaKnown RBP7.31□□□□□ -1.24
AC004542.1-201ENST00000602955 HELBQ8NG08 1087 aaPredicted RBP7.31□□□□□ -1.24
AC004542.1-201ENST00000602955 PBXIP1Q96AQ6 731 aa7.31□□□□□ -1.24
AC004542.1-201ENST00000602955 HLA-CQ95604 372 aa7.3□□□□□ -1.24
AC004542.1-201ENST00000602955 GUCA2AQ02747 115 aa7.29□□□□□ -1.24
AC004542.1-201ENST00000602955 SLC4A5Q9BY07 1137 aa7.29□□□□□ -1.24
AC004542.1-201ENST00000602955 RABGEF1Q9UJ41 708 aa7.29□□□□□ -1.24
AC004542.1-201ENST00000602955 CFAP99D6REC4 459 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms