RNA–Protein interactions for RNA: ENST00000602492.5

PPFIA3-204, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-204ENST00000602492 ZFYVE9O95405 1425 aa31.13■■■□□ 2.57
PPFIA3-204ENST00000602492 UNC13BO14795 1591 aa31.13■■■□□ 2.57
PPFIA3-204ENST00000602492 NWD1Q149M9 1564 aa31.13■■■□□ 2.57
PPFIA3-204ENST00000602492 HDGFP51858 240 aaKnown RBP31.12■■■□□ 2.57
PPFIA3-204ENST00000602492 GCC2Q8IWJ2 1684 aa31.12■■■□□ 2.57
PPFIA3-204ENST00000602492 PPP1R15AO75807 674 aaPredicted RBP31.11■■■□□ 2.57
PPFIA3-204ENST00000602492 PLEKHG1Q9ULL1 1385 aa31.11■■■□□ 2.57
PPFIA3-204ENST00000602492 RIMS2Q9UQ26 1411 aa31.1■■■□□ 2.57
PPFIA3-204ENST00000602492 ROCK1Q13464 1354 aa31.1■■■□□ 2.57
PPFIA3-204ENST00000602492 RBM33Q96EV2 1170 aaKnown RBP31.1■■■□□ 2.57
PPFIA3-204ENST00000602492 MYO5BQ9ULV0 1848 aa31.09■■■□□ 2.57
PPFIA3-204ENST00000602492 TMEM131LA2VDJ0 1609 aa31.07■■■□□ 2.56
PPFIA3-204ENST00000602492 CHGAP10645 457 aaKnown RBP31.05■■■□□ 2.56
PPFIA3-204ENST00000602492 MSH6P52701 1360 aa31.05■■■□□ 2.56
PPFIA3-204ENST00000602492 ROBO1Q9Y6N7 1651 aa31.03■■■□□ 2.56
PPFIA3-204ENST00000602492 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.03■■■□□ 2.56
PPFIA3-204ENST00000602492 E9PCH4 1651 aa31.02■■■□□ 2.56
PPFIA3-204ENST00000602492 IQGAP3Q86VI3 1631 aa31.01■■■□□ 2.55
PPFIA3-204ENST00000602492 CHD2O14647 1828 aaKnown RBP30.99■■■□□ 2.55
PPFIA3-204ENST00000602492 TBX22Q9Y458 520 aa30.99■■■□□ 2.55
PPFIA3-204ENST00000602492 NUP155O75694 1391 aa30.98■■■□□ 2.55
PPFIA3-204ENST00000602492 ITGAEP38570 1179 aa30.97■■■□□ 2.55
PPFIA3-204ENST00000602492 RGS17Q9UGC6 210 aaPredicted RBP30.96■■■□□ 2.55
PPFIA3-204ENST00000602492 SLAIN2Q9P270 581 aa30.95■■■□□ 2.55
PPFIA3-204ENST00000602492 NUTM2DQ5VT03 806 aaPredicted RBP30.94■■■□□ 2.54
PPFIA3-204ENST00000602492 ADAMTS13Q76LX8 1427 aa30.91■■■□□ 2.54
PPFIA3-204ENST00000602492 DIP2AQ14689 1571 aa30.91■■■□□ 2.54
PPFIA3-204ENST00000602492 NCOA3Q9Y6Q9 1424 aa30.9■■■□□ 2.54
PPFIA3-204ENST00000602492 C14orf37Q86TY3 774 aa30.89■■■□□ 2.54
PPFIA3-204ENST00000602492 PIK3R4Q99570 1358 aa30.89■■■□□ 2.54
PPFIA3-204ENST00000602492 PPARGC1BQ86YN6 1023 aaKnown RBP30.87■■■□□ 2.53
PPFIA3-204ENST00000602492 PHLPP1O60346 1717 aa30.85■■■□□ 2.53
PPFIA3-204ENST00000602492 JCADQ9P266 1359 aa30.82■■■□□ 2.52
PPFIA3-204ENST00000602492 TRPM2O94759 1503 aa30.82■■■□□ 2.52
PPFIA3-204ENST00000602492 CADPS2Q86UW7 1296 aa30.8■■■□□ 2.52
PPFIA3-204ENST00000602492 C19orf44Q9H6X5 657 aa30.8■■■□□ 2.52
PPFIA3-204ENST00000602492 POTEAQ6S8J7 498 aa30.79■■■□□ 2.52
PPFIA3-204ENST00000602492 ATF3P18847 181 aa30.78■■■□□ 2.52
PPFIA3-204ENST00000602492 AMOTL2Q9Y2J4 779 aa30.78■■■□□ 2.52
PPFIA3-204ENST00000602492 SPHKAPQ2M3C7 1700 aa30.77■■■□□ 2.52
PPFIA3-204ENST00000602492 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.76■■■□□ 2.52
PPFIA3-204ENST00000602492 COL16A1Q07092 1604 aaPredicted RBP30.75■■■□□ 2.51
PPFIA3-204ENST00000602492 PTPRUQ92729 1446 aa30.74■■■□□ 2.51
PPFIA3-204ENST00000602492 ZNF326Q5BKZ1 582 aaKnown RBP30.74■■■□□ 2.51
PPFIA3-204ENST00000602492 SETBP1Q9Y6X0 1596 aa30.71■■■□□ 2.51
PPFIA3-204ENST00000602492 NRXN3Q9Y4C0 1643 aa30.69■■■□□ 2.5
PPFIA3-204ENST00000602492 AHDC1Q5TGY3 1603 aaPredicted RBP30.69■■■□□ 2.5
PPFIA3-204ENST00000602492 RRBP1Q9P2E9 1410 aaKnown RBP30.67■■■□□ 2.5
PPFIA3-204ENST00000602492 SPATA31A6Q5VVP1 1343 aa30.67■■■□□ 2.5
PPFIA3-204ENST00000602492 DCCP43146 1447 aa30.66■■■□□ 2.5
PPFIA3-204ENST00000602492 XRN1Q8IZH2 1706 aaKnown RBP30.66■■■□□ 2.5
PPFIA3-204ENST00000602492 CLTCL1P53675 1640 aa30.63■■■□□ 2.49
PPFIA3-204ENST00000602492 BRINP3Q76B58 766 aa30.63■■■□□ 2.49
PPFIA3-204ENST00000602492 NAIPQ13075 1403 aa30.63■■■□□ 2.49
PPFIA3-204ENST00000602492 METP08581 1390 aa30.62■■■□□ 2.49
PPFIA3-204ENST00000602492 LRP6O75581 1613 aa30.61■■■□□ 2.49
PPFIA3-204ENST00000602492 MEX3CQ5U5Q3 659 aaKnown RBP30.6■■■□□ 2.49
PPFIA3-204ENST00000602492 NEXMIFQ5QGS0 1516 aa30.59■■■□□ 2.49
PPFIA3-204ENST00000602492 SHPRHQ149N8 1683 aa30.58■■■□□ 2.49
PPFIA3-204ENST00000602492 MST1RQ04912 1400 aa30.56■■■□□ 2.48
PPFIA3-204ENST00000602492 KIF1BO60333 1816 aa30.55■■■□□ 2.48
PPFIA3-204ENST00000602492 ASXL1Q8IXJ9 1541 aa30.55■■■□□ 2.48
PPFIA3-204ENST00000602492 ADGRL3Q9HAR2 1447 aa30.54■■■□□ 2.48
PPFIA3-204ENST00000602492 ZNF772Q68DY9 489 aaPredicted RBP30.53■■■□□ 2.48
PPFIA3-204ENST00000602492 TRIM52Q96A61 297 aa30.53■■■□□ 2.48
PPFIA3-204ENST00000602492 SETD1AO15047 1707 aaKnown RBP30.5■■■□□ 2.47
PPFIA3-204ENST00000602492 HFM1A2PYH4 1435 aa30.49■■■□□ 2.47
PPFIA3-204ENST00000602492 VGFO15240 615 aaPredicted RBP30.48■■■□□ 2.47
PPFIA3-204ENST00000602492 SETD5Q9C0A6 1442 aa30.47■■■□□ 2.47
PPFIA3-204ENST00000602492 NUTM2BA6NNL0 878 aaPredicted RBP30.47■■■□□ 2.47
PPFIA3-204ENST00000602492 NUTM2EB1AL46 878 aaPredicted RBP30.47■■■□□ 2.47
PPFIA3-204ENST00000602492 NUTM2AQ8IVF1 878 aaPredicted RBP30.47■■■□□ 2.47
PPFIA3-204ENST00000602492 NHSL1Q5SYE7 1610 aa30.47■■■□□ 2.47
PPFIA3-204ENST00000602492 NALCNQ8IZF0 1738 aa30.45■■■□□ 2.47
PPFIA3-204ENST00000602492 SLC4A1APQ9BWU0 796 aaKnown RBP30.45■■■□□ 2.47
PPFIA3-204ENST00000602492 LRRC59Q96AG4 307 aaKnown RBP30.44■■■□□ 2.46
PPFIA3-204ENST00000602492 PTCH1Q13635 1447 aa30.43■■■□□ 2.46
PPFIA3-204ENST00000602492 RPGRIP1LQ68CZ1 1315 aa30.43■■■□□ 2.46
PPFIA3-204ENST00000602492 DDX17Q92841 729 aaKnown RBP30.38■■■□□ 2.45
PPFIA3-204ENST00000602492 ROBO2Q9HCK4 1378 aa30.38■■■□□ 2.45
PPFIA3-204ENST00000602492 C1orf167Q5SNV9 1468 aa30.37■■■□□ 2.45
PPFIA3-204ENST00000602492 RXRBP28702 533 aa30.36■■■□□ 2.45
PPFIA3-204ENST00000602492 AFF2P51816 1311 aa30.36■■■□□ 2.45
PPFIA3-204ENST00000602492 PNPLA6Q8IY17 1366 aa30.35■■■□□ 2.45
PPFIA3-204ENST00000602492 PRAG1Q86YV5 1406 aa30.34■■■□□ 2.45
PPFIA3-204ENST00000602492 PPLO60437 1756 aa30.32■■■□□ 2.44
PPFIA3-204ENST00000602492 C8orf37Q96NL8 207 aa30.29■■■□□ 2.44
PPFIA3-204ENST00000602492 CDK12Q9NYV4 1490 aaPredicted RBP30.29■■■□□ 2.44
PPFIA3-204ENST00000602492 FOXD1Q16676 465 aa30.28■■■□□ 2.44
PPFIA3-204ENST00000602492 LAMC1P11047 1609 aa30.27■■■□□ 2.44
PPFIA3-204ENST00000602492 UPF1Q92900 1129 aaKnown RBP eCLIP30.27■■■□□ 2.44
PPFIA3-204ENST00000602492 ORAI2Q96SN7 254 aa30.27■■■□□ 2.44
PPFIA3-204ENST00000602492 CCDC144AA2RUR9 1427 aa30.25■■■□□ 2.43
PPFIA3-204ENST00000602492 SOS2Q07890 1332 aaPredicted RBP30.24■■■□□ 2.43
PPFIA3-204ENST00000602492 ADAMTS2O95450 1211 aa30.21■■■□□ 2.43
PPFIA3-204ENST00000602492 QTRT2Q9H974 415 aaKnown RBP30.21■■■□□ 2.43
PPFIA3-204ENST00000602492 ADGRF5Q8IZF2 1346 aa30.21■■■□□ 2.43
PPFIA3-204ENST00000602492 RGL3Q3MIN7 710 aa30.2■■■□□ 2.43
PPFIA3-204ENST00000602492 NGLY1Q96IV0 654 aa30.2■■■□□ 2.43
PPFIA3-204ENST00000602492 RBM6P78332 1123 aaKnown RBP30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms