RNA–Protein interactions for RNA: ENST00000601729.1

AC006539.2-201, humanhuman

BASIC

Gene AC006539.2, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.2-201ENST00000601729 WNT2BQ93097 391 aa9.57□□□□□ -0.88
AC006539.2-201ENST00000601729 LRCH3Q96II8 777 aa9.57□□□□□ -0.88
AC006539.2-201ENST00000601729 PDE4DQ08499 809 aa9.56□□□□□ -0.88
AC006539.2-201ENST00000601729 NYAP1Q6ZVC0 841 aa9.56□□□□□ -0.88
AC006539.2-201ENST00000601729 SAMD7Q7Z3H4 446 aa9.56□□□□□ -0.88
AC006539.2-201ENST00000601729 SULF1Q8IWU6 871 aa9.56□□□□□ -0.88
AC006539.2-201ENST00000601729 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.56□□□□□ -0.88
AC006539.2-201ENST00000601729 PRKCSHP14314 528 aaPredicted RBP9.55□□□□□ -0.88
AC006539.2-201ENST00000601729 SWT1Q5T5J6 900 aaKnown RBP9.55□□□□□ -0.88
AC006539.2-201ENST00000601729 THSD4Q6ZMP0 1018 aa9.55□□□□□ -0.88
AC006539.2-201ENST00000601729 RSPH4AQ5TD94 716 aa9.54□□□□□ -0.88
AC006539.2-201ENST00000601729 MDM2Q00987 491 aaPredicted RBP9.53□□□□□ -0.88
AC006539.2-201ENST00000601729 PARP9Q8IXQ6 854 aa9.53□□□□□ -0.88
AC006539.2-201ENST00000601729 RNF166Q96A37 237 aaPredicted RBP9.53□□□□□ -0.88
AC006539.2-201ENST00000601729 FAM217BQ9NTX9 383 aaPredicted RBP9.53□□□□□ -0.88
AC006539.2-201ENST00000601729 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
AC006539.2-201ENST00000601729 TSR3Q9UJK0 312 aaKnown RBP9.52□□□□□ -0.89
AC006539.2-201ENST00000601729 TTLL12Q14166 644 aaPredicted RBP9.51□□□□□ -0.89
AC006539.2-201ENST00000601729 PRR14Q9BWN1 585 aa9.51□□□□□ -0.89
AC006539.2-201ENST00000601729 GIGYF2Q6Y7W6 1299 aaKnown RBP9.5□□□□□ -0.89
AC006539.2-201ENST00000601729 REPIN1Q9BWE0 567 aaKnown RBP9.5□□□□□ -0.89
AC006539.2-201ENST00000601729 CD46P15529 392 aa9.49□□□□□ -0.89
AC006539.2-201ENST00000601729 KCTD12Q96CX2 325 aaKnown RBP9.49□□□□□ -0.89
AC006539.2-201ENST00000601729 BCAMP50895 628 aa9.48□□□□□ -0.89
AC006539.2-201ENST00000601729 HCSTQ9UBK5 93 aa9.48□□□□□ -0.89
AC006539.2-201ENST00000601729 SLC10A3P09131 477 aa9.47□□□□□ -0.89
AC006539.2-201ENST00000601729 HPS5Q9UPZ3 1129 aa9.47□□□□□ -0.89
AC006539.2-201ENST00000601729 SSTR3P32745 418 aaPredicted RBP9.46□□□□□ -0.9
AC006539.2-201ENST00000601729 BRPF1P55201 1214 aaPredicted RBP9.46□□□□□ -0.9
AC006539.2-201ENST00000601729 PPP4CP60510 307 aa9.46□□□□□ -0.9
AC006539.2-201ENST00000601729 NLRP7Q8WX94 980 aa9.46□□□□□ -0.9
AC006539.2-201ENST00000601729 GCGRP47871 477 aa9.45□□□□□ -0.9
AC006539.2-201ENST00000601729 KDM4CQ9H3R0 1056 aa9.45□□□□□ -0.9
AC006539.2-201ENST00000601729 DDX11L8A8MPP1 907 aa9.44□□□□□ -0.9
AC006539.2-201ENST00000601729 DIXDC1Q155Q3 683 aa9.44□□□□□ -0.9
AC006539.2-201ENST00000601729 PLSCR2Q9NRY7 297 aa9.44□□□□□ -0.9
AC006539.2-201ENST00000601729 ACTN4O43707 911 aaKnown RBP9.43□□□□□ -0.9
AC006539.2-201ENST00000601729 USP46P62068 366 aa9.43□□□□□ -0.9
AC006539.2-201ENST00000601729 KMT5BQ4FZB7 885 aa9.43□□□□□ -0.9
AC006539.2-201ENST00000601729 DDRGK1Q96HY6 314 aa9.43□□□□□ -0.9
AC006539.2-201ENST00000601729 WBP1LQ9NX94 342 aa9.43□□□□□ -0.9
AC006539.2-201ENST00000601729 MS4A1P11836 297 aa9.42□□□□□ -0.9
AC006539.2-201ENST00000601729 CFHP08603 1231 aa9.41□□□□□ -0.9
AC006539.2-201ENST00000601729 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
AC006539.2-201ENST00000601729 RDH13Q8NBN7 331 aa9.41□□□□□ -0.9
AC006539.2-201ENST00000601729 GJA5P36382 358 aa9.4□□□□□ -0.9
AC006539.2-201ENST00000601729 APLP1P51693 650 aa9.39□□□□□ -0.91
AC006539.2-201ENST00000601729 BEGAINQ9BUH8 593 aa9.39□□□□□ -0.91
AC006539.2-201ENST00000601729 GPBP1L1Q9HC44 474 aaPredicted RBP9.39□□□□□ -0.91
AC006539.2-201ENST00000601729 RNF40O75150 1001 aa9.38□□□□□ -0.91
AC006539.2-201ENST00000601729 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
AC006539.2-201ENST00000601729 KDM4AO75164 1064 aa9.37□□□□□ -0.91
AC006539.2-201ENST00000601729 GRIPAP1Q4V328 841 aa9.37□□□□□ -0.91
AC006539.2-201ENST00000601729 ATP6V1AP38606 617 aa9.36□□□□□ -0.91
AC006539.2-201ENST00000601729 PTPN5P54829 565 aa9.36□□□□□ -0.91
AC006539.2-201ENST00000601729 TUSC1Q2TAM9 212 aa9.36□□□□□ -0.91
AC006539.2-201ENST00000601729 IFFO2Q5TF58 517 aa9.36□□□□□ -0.91
AC006539.2-201ENST00000601729 RSPH6AQ9H0K4 717 aa9.36□□□□□ -0.91
AC006539.2-201ENST00000601729 ITGBL1O95965 494 aaPredicted RBP9.35□□□□□ -0.91
AC006539.2-201ENST00000601729 SPIRE2Q8WWL2 714 aa9.35□□□□□ -0.91
AC006539.2-201ENST00000601729 NUTM1Q86Y26 1132 aa9.34□□□□□ -0.91
AC006539.2-201ENST00000601729 FAM117AQ9C073 453 aa9.34□□□□□ -0.91
AC006539.2-201ENST00000601729 SALL2Q9Y467 1007 aaPredicted RBP9.34□□□□□ -0.91
AC006539.2-201ENST00000601729 PLEKHG3A1L390 1219 aa9.33□□□□□ -0.92
AC006539.2-201ENST00000601729 HOXA2O43364 376 aa9.33□□□□□ -0.92
AC006539.2-201ENST00000601729 PCDHB3Q9Y5E6 796 aa9.33□□□□□ -0.92
AC006539.2-201ENST00000601729 FUT2Q10981 343 aa9.32□□□□□ -0.92
AC006539.2-201ENST00000601729 TJAP1Q5JTD0 557 aa9.32□□□□□ -0.92
AC006539.2-201ENST00000601729 MORN1Q5T089 497 aa9.32□□□□□ -0.92
AC006539.2-201ENST00000601729 NR1I2O75469 434 aa9.31□□□□□ -0.92
AC006539.2-201ENST00000601729 SH3D19Q5HYK7 790 aa9.31□□□□□ -0.92
AC006539.2-201ENST00000601729 TBC1D2Q9BYX2 928 aa9.31□□□□□ -0.92
AC006539.2-201ENST00000601729 SPTLC1O15269 473 aa9.3□□□□□ -0.92
AC006539.2-201ENST00000601729 IL21Q9HBE4 155 aa9.3□□□□□ -0.92
AC006539.2-201ENST00000601729 MYSM1Q5VVJ2 828 aa9.29□□□□□ -0.92
AC006539.2-201ENST00000601729 MTRQ99707 1265 aa9.29□□□□□ -0.92
AC006539.2-201ENST00000601729 SKIV2LQ15477 1246 aaKnown RBP9.28□□□□□ -0.92
AC006539.2-201ENST00000601729 Q3C1V9 767 aa9.28□□□□□ -0.92
AC006539.2-201ENST00000601729 RSBN1LQ6PCB5 846 aaPredicted RBP9.28□□□□□ -0.92
AC006539.2-201ENST00000601729 BLOC1S3Q6QNY0 202 aa9.27□□□□□ -0.93
AC006539.2-201ENST00000601729 ZPR1O75312 459 aa9.26□□□□□ -0.93
AC006539.2-201ENST00000601729 PRPF38BQ5VTL8 546 aaKnown RBP9.26□□□□□ -0.93
AC006539.2-201ENST00000601729 SCUBE3Q8IX30 993 aa9.26□□□□□ -0.93
AC006539.2-201ENST00000601729 THAP11Q96EK4 314 aa9.26□□□□□ -0.93
AC006539.2-201ENST00000601729 MOXD2PA6NHM9 499 aa9.25□□□□□ -0.93
AC006539.2-201ENST00000601729 SPDYE5A6NIY4 337 aa9.25□□□□□ -0.93
AC006539.2-201ENST00000601729 KCNC4Q03721 635 aa9.25□□□□□ -0.93
AC006539.2-201ENST00000601729 SLC27A5Q9Y2P5 690 aa9.25□□□□□ -0.93
AC006539.2-201ENST00000601729 FDX1P10109 184 aa9.24□□□□□ -0.93
AC006539.2-201ENST00000601729 CLK2P49760 499 aaKnown RBP9.24□□□□□ -0.93
AC006539.2-201ENST00000601729 TMEM132AQ24JP5 1023 aa9.24□□□□□ -0.93
AC006539.2-201ENST00000601729 BRICD5Q6PL45 260 aa9.24□□□□□ -0.93
AC006539.2-201ENST00000601729 RIC3Q7Z5B4 369 aa9.24□□□□□ -0.93
AC006539.2-201ENST00000601729 IL27Q8NEV9 243 aa9.23□□□□□ -0.93
AC006539.2-201ENST00000601729 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.23□□□□□ -0.93
AC006539.2-201ENST00000601729 FMNL1O95466 1100 aaPredicted RBP9.22□□□□□ -0.93
AC006539.2-201ENST00000601729 PUS10Q3MIT2 529 aaKnown RBP9.22□□□□□ -0.93
AC006539.2-201ENST00000601729 MSS51Q4VC12 460 aa9.21□□□□□ -0.94
AC006539.2-201ENST00000601729 PPP2R2DQ66LE6 453 aa9.21□□□□□ -0.94
AC006539.2-201ENST00000601729 PCDHGC3Q9UN70 934 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms