RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 A2ML1A8K2U0 1454 aa32■■■□□ 2.71
IRF3-228ENST00000601291 NRXN1Q9ULB1 1477 aa31.97■■■□□ 2.71
IRF3-228ENST00000601291 ROCK2O75116 1388 aaKnown RBP31.97■■■□□ 2.71
IRF3-228ENST00000601291 VGFO15240 615 aaPredicted RBP31.95■■■□□ 2.71
IRF3-228ENST00000601291 ADGRF5Q8IZF2 1346 aa31.94■■■□□ 2.7
IRF3-228ENST00000601291 MYO3AQ8NEV4 1616 aa31.93■■■□□ 2.7
IRF3-228ENST00000601291 ZFYVE9O95405 1425 aa31.93■■■□□ 2.7
IRF3-228ENST00000601291 EIF4G2P78344 907 aaKnown RBP eCLIP31.93■■■□□ 2.72e-7■■■■■ 34.3
IRF3-228ENST00000601291 UBR1Q8IWV7 1749 aa31.92■■■□□ 2.7
IRF3-228ENST00000601291 CARD11Q9BXL7 1154 aa31.91■■■□□ 2.7
IRF3-228ENST00000601291 KIAA1210Q9ULL0 1709 aa31.91■■■□□ 2.7
IRF3-228ENST00000601291 GPRASP1Q5JY77 1395 aa31.9■■■□□ 2.7
IRF3-228ENST00000601291 PTPRMP28827 1452 aa31.9■■■□□ 2.7
IRF3-228ENST00000601291 PIK3C2GO75747 1445 aa31.9■■■□□ 2.7
IRF3-228ENST00000601291 LAMC1P11047 1609 aa31.89■■■□□ 2.7
IRF3-228ENST00000601291 RIMS2Q9UQ26 1411 aa31.88■■■□□ 2.69
IRF3-228ENST00000601291 HSPA5P11021 654 aaKnown RBP31.85■■■□□ 2.69
IRF3-228ENST00000601291 USP47Q96K76 1375 aa31.84■■■□□ 2.69
IRF3-228ENST00000601291 HDGFP51858 240 aaKnown RBP31.84■■■□□ 2.69
IRF3-228ENST00000601291 NBPF1Q3BBV0 1214 aa31.84■■■□□ 2.69
IRF3-228ENST00000601291 NUTM2DQ5VT03 806 aaPredicted RBP31.84■■■□□ 2.69
IRF3-228ENST00000601291 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.84■■■□□ 2.69
IRF3-228ENST00000601291 CEP170BQ9Y4F5 1589 aaPredicted RBP31.82■■■□□ 2.68
IRF3-228ENST00000601291 TMEM2Q9UHN6 1383 aa31.82■■■□□ 2.68
IRF3-228ENST00000601291 CFAP70Q5T0N1 1121 aa31.79■■■□□ 2.68
IRF3-228ENST00000601291 ZNF142P52746 1687 aaPredicted RBP31.78■■■□□ 2.68
IRF3-228ENST00000601291 HIRIP3Q9BW71 556 aaPredicted RBP31.78■■■□□ 2.68
IRF3-228ENST00000601291 SETBP1Q9Y6X0 1596 aa31.78■■■□□ 2.68
IRF3-228ENST00000601291 C14orf93Q9H972 538 aaKnown RBP31.77■■■□□ 2.68
IRF3-228ENST00000601291 THEMISQ8N1K5 641 aaPredicted RBP31.77■■■□□ 2.68
IRF3-228ENST00000601291 SLIT1O75093 1534 aa31.75■■■□□ 2.67
IRF3-228ENST00000601291 SETD1BQ9UPS6 1966 aaKnown RBP31.73■■■□□ 2.67
IRF3-228ENST00000601291 ARHGAP23Q9P227 1491 aa31.73■■■□□ 2.67
IRF3-228ENST00000601291 SCAF11Q99590 1463 aaKnown RBP31.72■■■□□ 2.67
IRF3-228ENST00000601291 IQGAP1P46940 1657 aa31.71■■■□□ 2.67
IRF3-228ENST00000601291 EID1Q9Y6B2 187 aa31.69■■■□□ 2.66
IRF3-228ENST00000601291 ADGRB1O14514 1584 aa31.68■■■□□ 2.66
IRF3-228ENST00000601291 EIF3AQ14152 1382 aaKnown RBP31.67■■■□□ 2.66
IRF3-228ENST00000601291 KDM4FA0A1W2PPD8 638 aa31.66■■■□□ 2.66
IRF3-228ENST00000601291 ALKQ9UM73 1620 aa31.66■■■□□ 2.66
IRF3-228ENST00000601291 ST20-MTHFSA0A0A6YYL1 179 aa31.64■■■□□ 2.66
IRF3-228ENST00000601291 TXNDC2Q86VQ3 553 aa31.64■■■□□ 2.66
IRF3-228ENST00000601291 PLEKHG1Q9ULL1 1385 aa31.62■■■□□ 2.65
IRF3-228ENST00000601291 NRXN3Q9Y4C0 1643 aa31.61■■■□□ 2.65
IRF3-228ENST00000601291 LTKP29376 864 aa31.6■■■□□ 2.65
IRF3-228ENST00000601291 SENP3Q9H4L4 574 aaPredicted RBP31.6■■■□□ 2.65
IRF3-228ENST00000601291 TMEM132EQ6IEE7 984 aa31.59■■■□□ 2.65
IRF3-228ENST00000601291 BCANQ96GW7 911 aa31.59■■■□□ 2.65
IRF3-228ENST00000601291 ASXL1Q8IXJ9 1541 aa31.59■■■□□ 2.65
IRF3-228ENST00000601291 SETD1AO15047 1707 aaKnown RBP31.56■■■□□ 2.64
IRF3-228ENST00000601291 POLR1AO95602 1720 aaPredicted RBP31.54■■■□□ 2.64
IRF3-228ENST00000601291 DIEXFQ68CQ4 756 aaKnown RBP31.53■■■□□ 2.64
IRF3-228ENST00000601291 ANKLE2Q86XL3 938 aa31.52■■■□□ 2.64
IRF3-228ENST00000601291 YTHDC2Q9H6S0 1430 aaKnown RBP31.51■■■□□ 2.64
IRF3-228ENST00000601291 TRAK1Q9UPV9 953 aa31.51■■■□□ 2.64
IRF3-228ENST00000601291 WASHC2AQ641Q2 1341 aa31.51■■■□□ 2.63
IRF3-228ENST00000601291 CCDC7Q96M83 1385 aa31.5■■■□□ 2.63
IRF3-228ENST00000601291 ADAMTS13Q76LX8 1427 aa31.5■■■□□ 2.63
IRF3-228ENST00000601291 TESK2Q96S53 571 aa31.48■■■□□ 2.63
IRF3-228ENST00000601291 DIP2AQ14689 1571 aa31.48■■■□□ 2.63
IRF3-228ENST00000601291 C11orf95C9JLR9 678 aaPredicted RBP31.47■■■□□ 2.63
IRF3-228ENST00000601291 ARHGEF28Q8N1W1 1705 aaKnown RBP31.47■■■□□ 2.63
IRF3-228ENST00000601291 SLC24A1O60721 1099 aa31.47■■■□□ 2.63
IRF3-228ENST00000601291 KIF7Q2M1P5 1343 aa31.46■■■□□ 2.63
IRF3-228ENST00000601291 CENPJQ9HC77 1338 aaPredicted RBP31.46■■■□□ 2.63
IRF3-228ENST00000601291 LRPPRCP42704 1394 aaKnown RBP31.45■■■□□ 2.63
IRF3-228ENST00000601291 MED14O60244 1454 aa31.45■■■□□ 2.62
IRF3-228ENST00000601291 METP08581 1390 aa31.44■■■□□ 2.62
IRF3-228ENST00000601291 TMF1P82094 1093 aa31.44■■■□□ 2.62
IRF3-228ENST00000601291 STK26Q9P289 416 aa31.44■■■□□ 2.62
IRF3-228ENST00000601291 SBNO2Q9Y2G9 1366 aa31.43■■■□□ 2.62
IRF3-228ENST00000601291 DLC1Q96QB1 1528 aa31.42■■■□□ 2.62
IRF3-228ENST00000601291 DDX10Q13206 875 aaKnown RBP31.41■■■□□ 2.62
IRF3-228ENST00000601291 TBX22Q9Y458 520 aa31.41■■■□□ 2.62
IRF3-228ENST00000601291 QRICH2Q9H0J4 1663 aa31.4■■■□□ 2.62
IRF3-228ENST00000601291 ABCC11Q96J66 1382 aa31.4■■■□□ 2.62
IRF3-228ENST00000601291 SLC26A8Q96RN1 970 aa31.39■■■□□ 2.62
IRF3-228ENST00000601291 KNDC1Q76NI1 1749 aa31.38■■■□□ 2.61
IRF3-228ENST00000601291 DISP3Q9P2K9 1392 aa31.38■■■□□ 2.61
IRF3-228ENST00000601291 CDCA8Q53HL2 280 aa31.36■■■□□ 2.61
IRF3-228ENST00000601291 POLR3GLQ9BT43 218 aa31.36■■■□□ 2.61
IRF3-228ENST00000601291 TECPR2O15040 1411 aa31.36■■■□□ 2.61
IRF3-228ENST00000601291 NPHP4O75161 1426 aaPredicted RBP31.36■■■□□ 2.61
IRF3-228ENST00000601291 POGKQ9P215 609 aa31.34■■■□□ 2.61
IRF3-228ENST00000601291 CPS1P31327 1500 aa31.33■■■□□ 2.61
IRF3-228ENST00000601291 PRAM1Q96QH2 718 aa31.33■■■□□ 2.61
IRF3-228ENST00000601291 LMTK3Q96Q04 1460 aa31.33■■■□□ 2.61
IRF3-228ENST00000601291 PIK3R4Q99570 1358 aa31.32■■■□□ 2.6
IRF3-228ENST00000601291 NCKAP5LQ9HCH0 1330 aa31.3■■■□□ 2.6
IRF3-228ENST00000601291 FAM135BQ49AJ0 1406 aa31.3■■■□□ 2.6
IRF3-228ENST00000601291 SIRT1Q96EB6 747 aa31.3■■■□□ 2.6
IRF3-228ENST00000601291 PTPRUQ92729 1446 aa31.26■■■□□ 2.59
IRF3-228ENST00000601291 SAFB2Q14151 953 aaKnown RBP eCLIP31.26■■■□□ 2.59
IRF3-228ENST00000601291 HSPA2P54652 639 aa31.24■■■□□ 2.59
IRF3-228ENST00000601291 EVC2Q86UK5 1308 aa31.24■■■□□ 2.59
IRF3-228ENST00000601291 AMOTL2Q9Y2J4 779 aa31.23■■■□□ 2.59
IRF3-228ENST00000601291 XRN1Q8IZH2 1706 aaKnown RBP31.22■■■□□ 2.59
IRF3-228ENST00000601291 PTCH1Q13635 1447 aa31.22■■■□□ 2.59
IRF3-228ENST00000601291 WAPLQ7Z5K2 1190 aa31.21■■■□□ 2.59
IRF3-228ENST00000601291 ROBO2Q9HCK4 1378 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms