RNA–Protein interactions for RNA: ENST00000596983.1

MCM3-206, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 3

Gene MCM3, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-206ENST00000596983 ZFYVE9O95405 1425 aa22.34■■□□□ 1.17
MCM3-206ENST00000596983 KCNA6P17658 529 aa22.34■■□□□ 1.17
MCM3-206ENST00000596983 TMEM94Q12767 1356 aa22.34■■□□□ 1.17
MCM3-206ENST00000596983 NWD1Q149M9 1564 aa22.33■■□□□ 1.17
MCM3-206ENST00000596983 ITGAEP38570 1179 aa22.32■■□□□ 1.16
MCM3-206ENST00000596983 NKTRP30414 1462 aaKnown RBP22.32■■□□□ 1.16
MCM3-206ENST00000596983 TMEM131LA2VDJ0 1609 aa22.31■■□□□ 1.16
MCM3-206ENST00000596983 MYO5BQ9ULV0 1848 aa22.31■■□□□ 1.16
MCM3-206ENST00000596983 IQGAP3Q86VI3 1631 aa22.31■■□□□ 1.16
MCM3-206ENST00000596983 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
MCM3-206ENST00000596983 E9PCH4 1651 aa22.3■■□□□ 1.16
MCM3-206ENST00000596983 NAIPQ13075 1403 aa22.3■■□□□ 1.16
MCM3-206ENST00000596983 PLEKHG1Q9ULL1 1385 aa22.29■■□□□ 1.16
MCM3-206ENST00000596983 PROSER2Q86WR7 435 aaPredicted RBP22.28■■□□□ 1.16
MCM3-206ENST00000596983 BCANQ96GW7 911 aa22.28■■□□□ 1.16
MCM3-206ENST00000596983 FAM135BQ49AJ0 1406 aa22.28■■□□□ 1.16
MCM3-206ENST00000596983 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
MCM3-206ENST00000596983 PPP1R15AO75807 674 aaPredicted RBP22.25■■□□□ 1.15
MCM3-206ENST00000596983 RBM33Q96EV2 1170 aaKnown RBP22.25■■□□□ 1.15
MCM3-206ENST00000596983 NUP155O75694 1391 aa22.25■■□□□ 1.15
MCM3-206ENST00000596983 HDGFP51858 240 aaKnown RBP22.24■■□□□ 1.15
MCM3-206ENST00000596983 CHGAP10645 457 aaKnown RBP22.23■■□□□ 1.15
MCM3-206ENST00000596983 PCGF6Q9BYE7 350 aa22.22■■□□□ 1.15
MCM3-206ENST00000596983 ROBO1Q9Y6N7 1651 aa22.21■■□□□ 1.15
MCM3-206ENST00000596983 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.21■■□□□ 1.15
MCM3-206ENST00000596983 CHD2O14647 1828 aaKnown RBP22.2■■□□□ 1.14
MCM3-206ENST00000596983 MSH6P52701 1360 aa22.2■■□□□ 1.14
MCM3-206ENST00000596983 SETD5Q9C0A6 1442 aa22.2■■□□□ 1.14
MCM3-206ENST00000596983 DIP2AQ14689 1571 aa22.18■■□□□ 1.14
MCM3-206ENST00000596983 ADAMTS13Q76LX8 1427 aa22.18■■□□□ 1.14
MCM3-206ENST00000596983 TBX22Q9Y458 520 aa22.18■■□□□ 1.14
MCM3-206ENST00000596983 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
MCM3-206ENST00000596983 RAB3GAP2Q9H2M9 1393 aa22.15■■□□□ 1.14
MCM3-206ENST00000596983 NCOA3Q9Y6Q9 1424 aa22.13■■□□□ 1.13
MCM3-206ENST00000596983 PIK3R4Q99570 1358 aa22.12■■□□□ 1.13
MCM3-206ENST00000596983 SPHKAPQ2M3C7 1700 aa22.12■■□□□ 1.13
MCM3-206ENST00000596983 SLAIN2Q9P270 581 aa22.11■■□□□ 1.13
MCM3-206ENST00000596983 TRPM2O94759 1503 aa22.1■■□□□ 1.13
MCM3-206ENST00000596983 RGS17Q9UGC6 210 aaPredicted RBP22.09■■□□□ 1.13
MCM3-206ENST00000596983 PTPRUQ92729 1446 aa22.06■■□□□ 1.12
MCM3-206ENST00000596983 NRXN3Q9Y4C0 1643 aa22.06■■□□□ 1.12
MCM3-206ENST00000596983 PHLPP1O60346 1717 aa22.06■■□□□ 1.12
MCM3-206ENST00000596983 HRCP23327 699 aa22.06■■□□□ 1.12
MCM3-206ENST00000596983 C14orf37Q86TY3 774 aa22.06■■□□□ 1.12
MCM3-206ENST00000596983 SETBP1Q9Y6X0 1596 aa22.05■■□□□ 1.12
MCM3-206ENST00000596983 ACIN1Q9UKV3 1341 aaKnown RBP22.05■■□□□ 1.12
MCM3-206ENST00000596983 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.04■■□□□ 1.12
MCM3-206ENST00000596983 CLTCL1P53675 1640 aa22.03■■□□□ 1.12
MCM3-206ENST00000596983 AMOTL2Q9Y2J4 779 aa22.03■■□□□ 1.12
MCM3-206ENST00000596983 COL16A1Q07092 1604 aaPredicted RBP22.02■■□□□ 1.12
MCM3-206ENST00000596983 JCADQ9P266 1359 aa22.02■■□□□ 1.12
MCM3-206ENST00000596983 ZNF326Q5BKZ1 582 aaKnown RBP22.02■■□□□ 1.12
MCM3-206ENST00000596983 CADPS2Q86UW7 1296 aa22.02■■□□□ 1.12
MCM3-206ENST00000596983 C19orf44Q9H6X5 657 aa22.02■■□□□ 1.12
MCM3-206ENST00000596983 XRN1Q8IZH2 1706 aaKnown RBP22.01■■□□□ 1.11
MCM3-206ENST00000596983 NEXMIFQ5QGS0 1516 aa22■■□□□ 1.11
MCM3-206ENST00000596983 ATF3P18847 181 aa21.99■■□□□ 1.11
MCM3-206ENST00000596983 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
MCM3-206ENST00000596983 METP08581 1390 aa21.97■■□□□ 1.11
MCM3-206ENST00000596983 DCCP43146 1447 aa21.97■■□□□ 1.11
MCM3-206ENST00000596983 POTEAQ6S8J7 498 aa21.96■■□□□ 1.11
MCM3-206ENST00000596983 KIF1BO60333 1816 aa21.93■■□□□ 1.1
MCM3-206ENST00000596983 BRINP3Q76B58 766 aa21.92■■□□□ 1.1
MCM3-206ENST00000596983 LRP6O75581 1613 aa21.91■■□□□ 1.1
MCM3-206ENST00000596983 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
MCM3-206ENST00000596983 SPATA31A6Q5VVP1 1343 aa21.9■■□□□ 1.1
MCM3-206ENST00000596983 MST1RQ04912 1400 aa21.89■■□□□ 1.1
MCM3-206ENST00000596983 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.1
MCM3-206ENST00000596983 SHPRHQ149N8 1683 aa21.89■■□□□ 1.1
MCM3-206ENST00000596983 ASXL1Q8IXJ9 1541 aa21.89■■□□□ 1.09
MCM3-206ENST00000596983 ADGRL3Q9HAR2 1447 aa21.89■■□□□ 1.09
MCM3-206ENST00000596983 SLC4A1APQ9BWU0 796 aaKnown RBP21.86■■□□□ 1.09
MCM3-206ENST00000596983 NALCNQ8IZF0 1738 aa21.86■■□□□ 1.09
MCM3-206ENST00000596983 SETD1AO15047 1707 aaKnown RBP21.85■■□□□ 1.09
MCM3-206ENST00000596983 PTCH1Q13635 1447 aa21.84■■□□□ 1.09
MCM3-206ENST00000596983 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
MCM3-206ENST00000596983 VGFO15240 615 aaPredicted RBP21.83■■□□□ 1.09
MCM3-206ENST00000596983 MEX3CQ5U5Q3 659 aaKnown RBP21.82■■□□□ 1.08
MCM3-206ENST00000596983 RPGRIP1LQ68CZ1 1315 aa21.81■■□□□ 1.08
MCM3-206ENST00000596983 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
MCM3-206ENST00000596983 MPHOSPH9Q99550 1183 aa21.8■■□□□ 1.08
MCM3-206ENST00000596983 PPLO60437 1756 aa21.79■■□□□ 1.08
MCM3-206ENST00000596983 ROBO2Q9HCK4 1378 aa21.79■■□□□ 1.08
MCM3-206ENST00000596983 FOXD1Q16676 465 aa21.77■■□□□ 1.08
MCM3-206ENST00000596983 ZNF772Q68DY9 489 aaPredicted RBP21.77■■□□□ 1.08
MCM3-206ENST00000596983 C1orf167Q5SNV9 1468 aa21.77■■□□□ 1.07
MCM3-206ENST00000596983 NUTM2BA6NNL0 878 aaPredicted RBP21.75■■□□□ 1.07
MCM3-206ENST00000596983 NUTM2EB1AL46 878 aaPredicted RBP21.75■■□□□ 1.07
MCM3-206ENST00000596983 NUTM2AQ8IVF1 878 aaPredicted RBP21.75■■□□□ 1.07
MCM3-206ENST00000596983 CCDC144AA2RUR9 1427 aa21.74■■□□□ 1.07
MCM3-206ENST00000596983 DDX17Q92841 729 aaKnown RBP21.74■■□□□ 1.07
MCM3-206ENST00000596983 LRRC59Q96AG4 307 aaKnown RBP21.74■■□□□ 1.07
MCM3-206ENST00000596983 CLSPNQ9HAW4 1339 aa21.72■■□□□ 1.07
MCM3-206ENST00000596983 PNPLA6Q8IY17 1366 aa21.72■■□□□ 1.07
MCM3-206ENST00000596983 LAMC1P11047 1609 aa21.71■■□□□ 1.07
MCM3-206ENST00000596983 ANKRD30BQ9BXX2 1392 aa21.71■■□□□ 1.07
MCM3-206ENST00000596983 SPATA31E1Q6ZUB1 1445 aa21.71■■□□□ 1.07
MCM3-206ENST00000596983 ADGRF5Q8IZF2 1346 aa21.69■■□□□ 1.06
MCM3-206ENST00000596983 AFF2P51816 1311 aa21.68■■□□□ 1.06
MCM3-206ENST00000596983 IFT172Q9UG01 1749 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms