RNA–Protein interactions for RNA: ENST00000595596.1

GRAMD1A-205, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 881 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-205ENST00000595596 NKTRP30414 1462 aaKnown RBP29.23■■■□□ 2.27
GRAMD1A-205ENST00000595596 NWD1Q149M9 1564 aa29.2■■■□□ 2.26
GRAMD1A-205ENST00000595596 ROBO1Q9Y6N7 1651 aa29.2■■■□□ 2.26
GRAMD1A-205ENST00000595596 MYO5BQ9ULV0 1848 aa29.2■■■□□ 2.26
GRAMD1A-205ENST00000595596 RGS17Q9UGC6 210 aaPredicted RBP29.18■■■□□ 2.26
GRAMD1A-205ENST00000595596 MSH6P52701 1360 aa29.17■■■□□ 2.26
GRAMD1A-205ENST00000595596 RBM33Q96EV2 1170 aaKnown RBP29.17■■■□□ 2.26
GRAMD1A-205ENST00000595596 CHD2O14647 1828 aaKnown RBP29.16■■■□□ 2.26
GRAMD1A-205ENST00000595596 PPP1R15AO75807 674 aaPredicted RBP29.16■■■□□ 2.26
GRAMD1A-205ENST00000595596 GCC2Q8IWJ2 1684 aa29.15■■■□□ 2.26
GRAMD1A-205ENST00000595596 PLEKHG1Q9ULL1 1385 aa29.15■■■□□ 2.26
GRAMD1A-205ENST00000595596 ZFYVE9O95405 1425 aa29.14■■■□□ 2.26
GRAMD1A-205ENST00000595596 RIMS2Q9UQ26 1411 aa29.12■■■□□ 2.25
GRAMD1A-205ENST00000595596 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.12■■■□□ 2.25
GRAMD1A-205ENST00000595596 SLAIN2Q9P270 581 aa29.12■■■□□ 2.25
GRAMD1A-205ENST00000595596 TMEM131LA2VDJ0 1609 aa29.11■■■□□ 2.25
GRAMD1A-205ENST00000595596 TBX22Q9Y458 520 aa29.09■■■□□ 2.25
GRAMD1A-205ENST00000595596 UNC13BO14795 1591 aa29.09■■■□□ 2.25
GRAMD1A-205ENST00000595596 CHGAP10645 457 aaKnown RBP29.07■■■□□ 2.24
GRAMD1A-205ENST00000595596 PHLPP1O60346 1717 aa29.06■■■□□ 2.24
GRAMD1A-205ENST00000595596 NCOA3Q9Y6Q9 1424 aa29.05■■■□□ 2.24
GRAMD1A-205ENST00000595596 E9PCH4 1651 aa29.03■■■□□ 2.24
GRAMD1A-205ENST00000595596 POTEAQ6S8J7 498 aa29.03■■■□□ 2.24
GRAMD1A-205ENST00000595596 PPARGC1BQ86YN6 1023 aaKnown RBP29.02■■■□□ 2.24
GRAMD1A-205ENST00000595596 ROCK1Q13464 1354 aa29.01■■■□□ 2.24
GRAMD1A-205ENST00000595596 JCADQ9P266 1359 aa29.01■■■□□ 2.23
GRAMD1A-205ENST00000595596 C14orf37Q86TY3 774 aa29■■■□□ 2.23
GRAMD1A-205ENST00000595596 DIP2AQ14689 1571 aa28.99■■■□□ 2.23
GRAMD1A-205ENST00000595596 PIK3R4Q99570 1358 aa28.99■■■□□ 2.23
GRAMD1A-205ENST00000595596 IQGAP3Q86VI3 1631 aa28.98■■■□□ 2.23
GRAMD1A-205ENST00000595596 NUTM2DQ5VT03 806 aaPredicted RBP28.95■■■□□ 2.22
GRAMD1A-205ENST00000595596 CADPS2Q86UW7 1296 aa28.95■■■□□ 2.22
GRAMD1A-205ENST00000595596 ADAMTS13Q76LX8 1427 aa28.94■■■□□ 2.22
GRAMD1A-205ENST00000595596 C19orf44Q9H6X5 657 aa28.94■■■□□ 2.22
GRAMD1A-205ENST00000595596 NUP155O75694 1391 aa28.93■■■□□ 2.22
GRAMD1A-205ENST00000595596 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.92■■■□□ 2.22
GRAMD1A-205ENST00000595596 ATF3P18847 181 aa28.92■■■□□ 2.22
GRAMD1A-205ENST00000595596 COL16A1Q07092 1604 aaPredicted RBP28.91■■■□□ 2.22
GRAMD1A-205ENST00000595596 TRPM2O94759 1503 aa28.9■■■□□ 2.22
GRAMD1A-205ENST00000595596 SPATA31A6Q5VVP1 1343 aa28.88■■■□□ 2.21
GRAMD1A-205ENST00000595596 AMOTL2Q9Y2J4 779 aa28.87■■■□□ 2.21
GRAMD1A-205ENST00000595596 ITGAEP38570 1179 aa28.85■■■□□ 2.21
GRAMD1A-205ENST00000595596 AHDC1Q5TGY3 1603 aaPredicted RBP28.84■■■□□ 2.21
GRAMD1A-205ENST00000595596 MEX3CQ5U5Q3 659 aaKnown RBP28.82■■■□□ 2.2
GRAMD1A-205ENST00000595596 SPHKAPQ2M3C7 1700 aa28.8■■■□□ 2.2
GRAMD1A-205ENST00000595596 SHPRHQ149N8 1683 aa28.8■■■□□ 2.2
GRAMD1A-205ENST00000595596 ZNF772Q68DY9 489 aaPredicted RBP28.8■■■□□ 2.2
GRAMD1A-205ENST00000595596 PTPRUQ92729 1446 aa28.79■■■□□ 2.2
GRAMD1A-205ENST00000595596 DCCP43146 1447 aa28.78■■■□□ 2.2
GRAMD1A-205ENST00000595596 ZNF326Q5BKZ1 582 aaKnown RBP28.77■■■□□ 2.2
GRAMD1A-205ENST00000595596 BRINP3Q76B58 766 aa28.76■■■□□ 2.19
GRAMD1A-205ENST00000595596 SETD1AO15047 1707 aaKnown RBP28.76■■■□□ 2.19
GRAMD1A-205ENST00000595596 LRP6O75581 1613 aa28.76■■■□□ 2.19
GRAMD1A-205ENST00000595596 SETBP1Q9Y6X0 1596 aa28.75■■■□□ 2.19
GRAMD1A-205ENST00000595596 XRN1Q8IZH2 1706 aaKnown RBP28.74■■■□□ 2.19
GRAMD1A-205ENST00000595596 NRXN3Q9Y4C0 1643 aa28.73■■■□□ 2.19
GRAMD1A-205ENST00000595596 KIF1BO60333 1816 aa28.66■■■□□ 2.18
GRAMD1A-205ENST00000595596 ASXL1Q8IXJ9 1541 aa28.66■■■□□ 2.18
GRAMD1A-205ENST00000595596 NUTM2BA6NNL0 878 aaPredicted RBP28.66■■■□□ 2.18
GRAMD1A-205ENST00000595596 NUTM2EB1AL46 878 aaPredicted RBP28.66■■■□□ 2.18
GRAMD1A-205ENST00000595596 NUTM2AQ8IVF1 878 aaPredicted RBP28.66■■■□□ 2.18
GRAMD1A-205ENST00000595596 METP08581 1390 aa28.65■■■□□ 2.18
GRAMD1A-205ENST00000595596 LRRC59Q96AG4 307 aaKnown RBP28.65■■■□□ 2.18
GRAMD1A-205ENST00000595596 MST1RQ04912 1400 aa28.65■■■□□ 2.18
GRAMD1A-205ENST00000595596 SETD5Q9C0A6 1442 aa28.64■■■□□ 2.18
GRAMD1A-205ENST00000595596 RXRBP28702 533 aa28.64■■■□□ 2.18
GRAMD1A-205ENST00000595596 NHSL1Q5SYE7 1610 aa28.64■■■□□ 2.18
GRAMD1A-205ENST00000595596 RRBP1Q9P2E9 1410 aaKnown RBP28.63■■■□□ 2.17
GRAMD1A-205ENST00000595596 TRIM52Q96A61 297 aa28.63■■■□□ 2.17
GRAMD1A-205ENST00000595596 CLTCL1P53675 1640 aa28.62■■■□□ 2.17
GRAMD1A-205ENST00000595596 ADGRL3Q9HAR2 1447 aa28.61■■■□□ 2.17
GRAMD1A-205ENST00000595596 NEXMIFQ5QGS0 1516 aa28.61■■■□□ 2.17
GRAMD1A-205ENST00000595596 UPF1Q92900 1129 aaKnown RBP eCLIP28.58■■■□□ 2.17
GRAMD1A-205ENST00000595596 VGFO15240 615 aaPredicted RBP28.56■■■□□ 2.16
GRAMD1A-205ENST00000595596 AFF2P51816 1311 aa28.56■■■□□ 2.16
GRAMD1A-205ENST00000595596 NALCNQ8IZF0 1738 aa28.56■■■□□ 2.16
GRAMD1A-205ENST00000595596 CDK12Q9NYV4 1490 aaPredicted RBP28.56■■■□□ 2.16
GRAMD1A-205ENST00000595596 NAIPQ13075 1403 aa28.52■■■□□ 2.16
GRAMD1A-205ENST00000595596 PNPLA6Q8IY17 1366 aa28.5■■■□□ 2.15
GRAMD1A-205ENST00000595596 RPGRIP1LQ68CZ1 1315 aa28.49■■■□□ 2.15
GRAMD1A-205ENST00000595596 DDX17Q92841 729 aaKnown RBP28.49■■■□□ 2.15
GRAMD1A-205ENST00000595596 C1orf167Q5SNV9 1468 aa28.48■■■□□ 2.15
GRAMD1A-205ENST00000595596 C8orf37Q96NL8 207 aa28.48■■■□□ 2.15
GRAMD1A-205ENST00000595596 PTCH1Q13635 1447 aa28.48■■■□□ 2.15
GRAMD1A-205ENST00000595596 QTRT2Q9H974 415 aaKnown RBP28.46■■■□□ 2.15
GRAMD1A-205ENST00000595596 RBM6P78332 1123 aaKnown RBP28.45■■■□□ 2.14
GRAMD1A-205ENST00000595596 LAMC1P11047 1609 aa28.44■■■□□ 2.14
GRAMD1A-205ENST00000595596 NGLY1Q96IV0 654 aa28.42■■■□□ 2.14
GRAMD1A-205ENST00000595596 SLC4A1APQ9BWU0 796 aaKnown RBP28.42■■■□□ 2.14
GRAMD1A-205ENST00000595596 ROBO2Q9HCK4 1378 aa28.41■■■□□ 2.14
GRAMD1A-205ENST00000595596 PPLO60437 1756 aa28.4■■■□□ 2.14
GRAMD1A-205ENST00000595596 PRAG1Q86YV5 1406 aa28.4■■■□□ 2.14
GRAMD1A-205ENST00000595596 SOS2Q07890 1332 aaPredicted RBP28.4■■■□□ 2.14
GRAMD1A-205ENST00000595596 HFM1A2PYH4 1435 aa28.39■■■□□ 2.14
GRAMD1A-205ENST00000595596 ORAI2Q96SN7 254 aa28.39■■■□□ 2.14
GRAMD1A-205ENST00000595596 ADAMTS2O95450 1211 aa28.38■■■□□ 2.13
GRAMD1A-205ENST00000595596 RGS12O14924 1447 aa28.35■■■□□ 2.13
GRAMD1A-205ENST00000595596 USP21Q9UK80 565 aa28.31■■■□□ 2.12
GRAMD1A-205ENST00000595596 NPHP3Q7Z494 1330 aa28.29■■■□□ 2.12
GRAMD1A-205ENST00000595596 TRPC5Q9UL62 973 aaPredicted RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms