RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 TOM1O60784 492 aa24.13■■□□□ 1.45
IRF3-210ENST00000595240 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.12■■□□□ 1.45
IRF3-210ENST00000595240 PPP1R15AO75807 674 aaPredicted RBP24.11■■□□□ 1.45
IRF3-210ENST00000595240 TRIM52Q96A61 297 aa24.11■■□□□ 1.45
IRF3-210ENST00000595240 SPHKAPQ2M3C7 1700 aa24.1■■□□□ 1.45
IRF3-210ENST00000595240 KCNA6P17658 529 aa24.1■■□□□ 1.45
IRF3-210ENST00000595240 BCANQ96GW7 911 aa24.09■■□□□ 1.45
IRF3-210ENST00000595240 ALKQ9UM73 1620 aa24.08■■□□□ 1.45
IRF3-210ENST00000595240 TRPM2O94759 1503 aa24.07■■□□□ 1.44
IRF3-210ENST00000595240 PIP4K2BP78356 416 aa24.06■■□□□ 1.44
IRF3-210ENST00000595240 NUTM2DQ5VT03 806 aaPredicted RBP24.05■■□□□ 1.44
IRF3-210ENST00000595240 SLC4A1APQ9BWU0 796 aaKnown RBP24.05■■□□□ 1.44
IRF3-210ENST00000595240 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
IRF3-210ENST00000595240 TBX22Q9Y458 520 aa24.04■■□□□ 1.44
IRF3-210ENST00000595240 NWD1Q149M9 1564 aa24.03■■□□□ 1.44
IRF3-210ENST00000595240 SCAF1Q9H7N4 1312 aaKnown RBP24.03■■□□□ 1.44
IRF3-210ENST00000595240 ADAMTS13Q76LX8 1427 aa24.02■■□□□ 1.44
IRF3-210ENST00000595240 NKTRP30414 1462 aaKnown RBP24.02■■□□□ 1.44
IRF3-210ENST00000595240 CLTCL1P53675 1640 aa24.02■■□□□ 1.44
IRF3-210ENST00000595240 TMEM94Q12767 1356 aa24.02■■□□□ 1.44
IRF3-210ENST00000595240 PROSER2Q86WR7 435 aaPredicted RBP23.99■■□□□ 1.43
IRF3-210ENST00000595240 XIRP1Q702N8 1843 aaKnown RBP23.98■■□□□ 1.43
IRF3-210ENST00000595240 DIP2AQ14689 1571 aa23.98■■□□□ 1.43
IRF3-210ENST00000595240 HSPA1LP34931 641 aa23.97■■□□□ 1.43
IRF3-210ENST00000595240 ZNF326Q5BKZ1 582 aaKnown RBP23.97■■□□□ 1.43
IRF3-210ENST00000595240 PIK3R4Q99570 1358 aa23.96■■□□□ 1.43
IRF3-210ENST00000595240 RBM33Q96EV2 1170 aaKnown RBP23.95■■□□□ 1.42
IRF3-210ENST00000595240 MPHOSPH9Q99550 1183 aa23.93■■□□□ 1.42
IRF3-210ENST00000595240 NEXMIFQ5QGS0 1516 aa23.93■■□□□ 1.42
IRF3-210ENST00000595240 CHD2O14647 1828 aaKnown RBP23.93■■□□□ 1.42
IRF3-210ENST00000595240 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
IRF3-210ENST00000595240 SETBP1Q9Y6X0 1596 aa23.92■■□□□ 1.42
IRF3-210ENST00000595240 FOXD1Q16676 465 aa23.92■■□□□ 1.42
IRF3-210ENST00000595240 ACIN1Q9UKV3 1341 aaKnown RBP23.91■■□□□ 1.42
IRF3-210ENST00000595240 NRXN3Q9Y4C0 1643 aa23.9■■□□□ 1.42
IRF3-210ENST00000595240 KIF1BO60333 1816 aa23.88■■□□□ 1.41
IRF3-210ENST00000595240 DISP3Q9P2K9 1392 aa23.88■■□□□ 1.41
IRF3-210ENST00000595240 PTPRUQ92729 1446 aa23.87■■□□□ 1.41
IRF3-210ENST00000595240 NCOA3Q9Y6Q9 1424 aa23.87■■□□□ 1.41
IRF3-210ENST00000595240 MSH6P52701 1360 aa23.87■■□□□ 1.41
IRF3-210ENST00000595240 RPGRIP1LQ68CZ1 1315 aa23.85■■□□□ 1.41
IRF3-210ENST00000595240 FAM135BQ49AJ0 1406 aa23.85■■□□□ 1.41
IRF3-210ENST00000595240 AMOTL2Q9Y2J4 779 aa23.85■■□□□ 1.41
IRF3-210ENST00000595240 CCDC144AA2RUR9 1427 aa23.84■■□□□ 1.41
IRF3-210ENST00000595240 METP08581 1390 aa23.84■■□□□ 1.41
IRF3-210ENST00000595240 RAB3GAP2Q9H2M9 1393 aa23.84■■□□□ 1.41
IRF3-210ENST00000595240 VGFO15240 615 aaPredicted RBP23.83■■□□□ 1.41
IRF3-210ENST00000595240 XRN1Q8IZH2 1706 aaKnown RBP23.79■■□□□ 1.4
IRF3-210ENST00000595240 SPATA31E1Q6ZUB1 1445 aa23.79■■□□□ 1.4
IRF3-210ENST00000595240 SLAIN2Q9P270 581 aa23.78■■□□□ 1.4
IRF3-210ENST00000595240 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
IRF3-210ENST00000595240 C19orf44Q9H6X5 657 aa23.77■■□□□ 1.4
IRF3-210ENST00000595240 PPLO60437 1756 aa23.74■■□□□ 1.39
IRF3-210ENST00000595240 CADPS2Q86UW7 1296 aa23.74■■□□□ 1.39
IRF3-210ENST00000595240 ROBO1Q9Y6N7 1651 aa23.73■■□□□ 1.39
IRF3-210ENST00000595240 HRCP23327 699 aa23.72■■□□□ 1.39
IRF3-210ENST00000595240 RGL3Q3MIN7 710 aa23.72■■□□□ 1.39
IRF3-210ENST00000595240 MED1Q15648 1581 aaPredicted RBP23.72■■□□□ 1.39
IRF3-210ENST00000595240 ANKRD30BQ9BXX2 1392 aa23.71■■□□□ 1.39
IRF3-210ENST00000595240 ATF3P18847 181 aa23.71■■□□□ 1.39
IRF3-210ENST00000595240 SETD1AO15047 1707 aaKnown RBP23.7■■□□□ 1.39
IRF3-210ENST00000595240 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.7■■□□□ 1.39
IRF3-210ENST00000595240 DCCP43146 1447 aa23.7■■□□□ 1.38
IRF3-210ENST00000595240 ADGRF5Q8IZF2 1346 aa23.7■■□□□ 1.38
IRF3-210ENST00000595240 ILDR2Q71H61 639 aa23.69■■□□□ 1.38
IRF3-210ENST00000595240 PRAG1Q86YV5 1406 aa23.68■■□□□ 1.38
IRF3-210ENST00000595240 PTCH1Q13635 1447 aa23.67■■□□□ 1.38
IRF3-210ENST00000595240 ADGRL3Q9HAR2 1447 aa23.65■■□□□ 1.38
IRF3-210ENST00000595240 ROBO2Q9HCK4 1378 aa23.65■■□□□ 1.38
IRF3-210ENST00000595240 IFT172Q9UG01 1749 aa23.64■■□□□ 1.38
IRF3-210ENST00000595240 PIK3C2GO75747 1445 aa23.62■■□□□ 1.37
IRF3-210ENST00000595240 MST1RQ04912 1400 aa23.6■■□□□ 1.37
IRF3-210ENST00000595240 BRINP3Q76B58 766 aa23.59■■□□□ 1.37
IRF3-210ENST00000595240 NRXN1Q9ULB1 1477 aa23.58■■□□□ 1.37
IRF3-210ENST00000595240 MYOM2P54296 1465 aa23.57■■□□□ 1.36
IRF3-210ENST00000595240 PHLPP1O60346 1717 aa23.57■■□□□ 1.36
IRF3-210ENST00000595240 NALCNQ8IZF0 1738 aa23.57■■□□□ 1.36
IRF3-210ENST00000595240 LRPPRCP42704 1394 aaKnown RBP23.56■■□□□ 1.36
IRF3-210ENST00000595240 AHDC1Q5TGY3 1603 aaPredicted RBP23.56■■□□□ 1.36
IRF3-210ENST00000595240 TECPR2O15040 1411 aa23.56■■□□□ 1.36
IRF3-210ENST00000595240 COL16A1Q07092 1604 aaPredicted RBP23.55■■□□□ 1.36
IRF3-210ENST00000595240 ASXL1Q8IXJ9 1541 aa23.55■■□□□ 1.36
IRF3-210ENST00000595240 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
IRF3-210ENST00000595240 JCADQ9P266 1359 aa23.54■■□□□ 1.36
IRF3-210ENST00000595240 ABCC11Q96J66 1382 aa23.53■■□□□ 1.36
IRF3-210ENST00000595240 TMEM132EQ6IEE7 984 aa23.53■■□□□ 1.36
IRF3-210ENST00000595240 C14orf93Q9H972 538 aaKnown RBP23.53■■□□□ 1.36
IRF3-210ENST00000595240 STK26Q9P289 416 aa23.52■■□□□ 1.36
IRF3-210ENST00000595240 C1orf167Q5SNV9 1468 aa23.5■■□□□ 1.35
IRF3-210ENST00000595240 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
IRF3-210ENST00000595240 CFAP70Q5T0N1 1121 aa23.49■■□□□ 1.35
IRF3-210ENST00000595240 SOCS7O14512 581 aa23.48■■□□□ 1.35
IRF3-210ENST00000595240 WAPLQ7Z5K2 1190 aa23.47■■□□□ 1.35
IRF3-210ENST00000595240 LAMC1P11047 1609 aa23.46■■□□□ 1.35
IRF3-210ENST00000595240 RGS17Q9UGC6 210 aaPredicted RBP23.46■■□□□ 1.35
IRF3-210ENST00000595240 KNDC1Q76NI1 1749 aa23.45■■□□□ 1.34
IRF3-210ENST00000595240 CDC42BPGQ6DT37 1551 aa23.45■■□□□ 1.34
IRF3-210ENST00000595240 PLEKHH1Q9ULM0 1364 aa23.45■■□□□ 1.34
IRF3-210ENST00000595240 SIRT1Q96EB6 747 aa23.45■■□□□ 1.34
IRF3-210ENST00000595240 SPATA31A6Q5VVP1 1343 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms