RNA–Protein interactions for RNA: ENST00000594656.1

PPFIA4-207, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-207ENST00000594656 TBX22Q9Y458 520 aa20.12■□□□□ 0.81
PPFIA4-207ENST00000594656 CROCC2H7BZ55 1655 aa20.12■□□□□ 0.81
PPFIA4-207ENST00000594656 NWD1Q149M9 1564 aa20.11■□□□□ 0.81
PPFIA4-207ENST00000594656 ZFYVE9O95405 1425 aa20.1■□□□□ 0.81
PPFIA4-207ENST00000594656 PLEKHG1Q9ULL1 1385 aa20.1■□□□□ 0.81
PPFIA4-207ENST00000594656 APLP2Q06481 763 aa20.1■□□□□ 0.81
PPFIA4-207ENST00000594656 ADGRB3O60242 1522 aa20.1■□□□□ 0.81
PPFIA4-207ENST00000594656 HDGFP51858 240 aaKnown RBP20.09■□□□□ 0.81
PPFIA4-207ENST00000594656 RIMS2Q9UQ26 1411 aa20.07■□□□□ 0.8
PPFIA4-207ENST00000594656 NCOA3Q9Y6Q9 1424 aa20.05■□□□□ 0.8
PPFIA4-207ENST00000594656 PPP1R15AO75807 674 aaPredicted RBP20.05■□□□□ 0.8
PPFIA4-207ENST00000594656 ADGRL2O95490 1459 aa20.04■□□□□ 0.8
PPFIA4-207ENST00000594656 NUTM2DQ5VT03 806 aaPredicted RBP20.03■□□□□ 0.8
PPFIA4-207ENST00000594656 UPF1Q92900 1129 aaKnown RBP eCLIP20.03■□□□□ 0.8
PPFIA4-207ENST00000594656 C19orf44Q9H6X5 657 aa20.03■□□□□ 0.8
PPFIA4-207ENST00000594656 RPRD2Q5VT52 1461 aaKnown RBP20.03■□□□□ 0.8
PPFIA4-207ENST00000594656 SPATA31A6Q5VVP1 1343 aa20.02■□□□□ 0.8
PPFIA4-207ENST00000594656 ANKRD50Q9ULJ7 1429 aa20.02■□□□□ 0.8
PPFIA4-207ENST00000594656 PHLPP1O60346 1717 aa20.02■□□□□ 0.8
PPFIA4-207ENST00000594656 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.02■□□□□ 0.8
PPFIA4-207ENST00000594656 CHD2O14647 1828 aaKnown RBP20.02■□□□□ 0.79
PPFIA4-207ENST00000594656 LRP6O75581 1613 aa20.02■□□□□ 0.79
PPFIA4-207ENST00000594656 ADAMTS13Q76LX8 1427 aa20.02■□□□□ 0.79
PPFIA4-207ENST00000594656 CADPS2Q86UW7 1296 aa20.01■□□□□ 0.79
PPFIA4-207ENST00000594656 CHGAP10645 457 aaKnown RBP20■□□□□ 0.79
PPFIA4-207ENST00000594656 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
PPFIA4-207ENST00000594656 ZNF772Q68DY9 489 aaPredicted RBP20■□□□□ 0.79
PPFIA4-207ENST00000594656 C14orf37Q86TY3 774 aa20■□□□□ 0.79
PPFIA4-207ENST00000594656 COL16A1Q07092 1604 aaPredicted RBP20■□□□□ 0.79
PPFIA4-207ENST00000594656 TMEM131LA2VDJ0 1609 aa19.98■□□□□ 0.79
PPFIA4-207ENST00000594656 ATF3P18847 181 aa19.98■□□□□ 0.79
PPFIA4-207ENST00000594656 SETD1AO15047 1707 aaKnown RBP19.97■□□□□ 0.79
PPFIA4-207ENST00000594656 MEX3CQ5U5Q3 659 aaKnown RBP19.97■□□□□ 0.79
PPFIA4-207ENST00000594656 TRIM52Q96A61 297 aa19.97■□□□□ 0.79
PPFIA4-207ENST00000594656 AMOTL2Q9Y2J4 779 aa19.97■□□□□ 0.79
PPFIA4-207ENST00000594656 PIK3R4Q99570 1358 aa19.96■□□□□ 0.79
PPFIA4-207ENST00000594656 BRINP3Q76B58 766 aa19.96■□□□□ 0.79
PPFIA4-207ENST00000594656 MYO5BQ9ULV0 1848 aa19.94■□□□□ 0.78
PPFIA4-207ENST00000594656 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
PPFIA4-207ENST00000594656 RXRBP28702 533 aa19.93■□□□□ 0.78
PPFIA4-207ENST00000594656 AHDC1Q5TGY3 1603 aaPredicted RBP19.91■□□□□ 0.78
PPFIA4-207ENST00000594656 NUTM2BA6NNL0 878 aaPredicted RBP19.91■□□□□ 0.78
PPFIA4-207ENST00000594656 NUTM2EB1AL46 878 aaPredicted RBP19.91■□□□□ 0.78
PPFIA4-207ENST00000594656 NUTM2AQ8IVF1 878 aaPredicted RBP19.91■□□□□ 0.78
PPFIA4-207ENST00000594656 GCC2Q8IWJ2 1684 aa19.91■□□□□ 0.78
PPFIA4-207ENST00000594656 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.9■□□□□ 0.78
PPFIA4-207ENST00000594656 DIP2AQ14689 1571 aa19.86■□□□□ 0.77
PPFIA4-207ENST00000594656 AFF2P51816 1311 aa19.85■□□□□ 0.77
PPFIA4-207ENST00000594656 SETD5Q9C0A6 1442 aa19.85■□□□□ 0.77
PPFIA4-207ENST00000594656 SHPRHQ149N8 1683 aa19.84■□□□□ 0.77
PPFIA4-207ENST00000594656 LRRC59Q96AG4 307 aaKnown RBP19.84■□□□□ 0.77
PPFIA4-207ENST00000594656 E9PCH4 1651 aa19.84■□□□□ 0.77
PPFIA4-207ENST00000594656 NUP155O75694 1391 aa19.83■□□□□ 0.77
PPFIA4-207ENST00000594656 UNC13BO14795 1591 aa19.83■□□□□ 0.77
PPFIA4-207ENST00000594656 DDX17Q92841 729 aaKnown RBP19.83■□□□□ 0.77
PPFIA4-207ENST00000594656 ROCK1Q13464 1354 aa19.83■□□□□ 0.76
PPFIA4-207ENST00000594656 CDK12Q9NYV4 1490 aaPredicted RBP19.82■□□□□ 0.76
PPFIA4-207ENST00000594656 QTRT2Q9H974 415 aaKnown RBP19.82■□□□□ 0.76
PPFIA4-207ENST00000594656 DCCP43146 1447 aa19.82■□□□□ 0.76
PPFIA4-207ENST00000594656 MST1RQ04912 1400 aa19.82■□□□□ 0.76
PPFIA4-207ENST00000594656 METP08581 1390 aa19.82■□□□□ 0.76
PPFIA4-207ENST00000594656 TRPM2O94759 1503 aa19.81■□□□□ 0.76
PPFIA4-207ENST00000594656 ASXL1Q8IXJ9 1541 aa19.79■□□□□ 0.76
PPFIA4-207ENST00000594656 RBM6P78332 1123 aaKnown RBP19.78■□□□□ 0.76
PPFIA4-207ENST00000594656 C8orf37Q96NL8 207 aa19.78■□□□□ 0.76
PPFIA4-207ENST00000594656 IQGAP3Q86VI3 1631 aa19.76■□□□□ 0.75
PPFIA4-207ENST00000594656 PNPLA6Q8IY17 1366 aa19.76■□□□□ 0.75
PPFIA4-207ENST00000594656 ZNF326Q5BKZ1 582 aaKnown RBP19.75■□□□□ 0.75
PPFIA4-207ENST00000594656 NRXN3Q9Y4C0 1643 aa19.75■□□□□ 0.75
PPFIA4-207ENST00000594656 SETBP1Q9Y6X0 1596 aa19.74■□□□□ 0.75
PPFIA4-207ENST00000594656 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
PPFIA4-207ENST00000594656 ITGAEP38570 1179 aa19.73■□□□□ 0.75
PPFIA4-207ENST00000594656 RGS12O14924 1447 aa19.73■□□□□ 0.75
PPFIA4-207ENST00000594656 NGLY1Q96IV0 654 aa19.72■□□□□ 0.75
PPFIA4-207ENST00000594656 ADGRL3Q9HAR2 1447 aa19.71■□□□□ 0.75
PPFIA4-207ENST00000594656 ADAMTS2O95450 1211 aa19.71■□□□□ 0.75
PPFIA4-207ENST00000594656 NHSL1Q5SYE7 1610 aa19.7■□□□□ 0.74
PPFIA4-207ENST00000594656 C1orf167Q5SNV9 1468 aa19.69■□□□□ 0.74
PPFIA4-207ENST00000594656 ORAI2Q96SN7 254 aa19.69■□□□□ 0.74
PPFIA4-207ENST00000594656 SOS2Q07890 1332 aaPredicted RBP19.68■□□□□ 0.74
PPFIA4-207ENST00000594656 SRCAPQ6ZRS2 3230 aa19.65■□□□□ 0.74
PPFIA4-207ENST00000594656 FNBP4Q8N3X1 1017 aaPredicted RBP19.65■□□□□ 0.74
PPFIA4-207ENST00000594656 USP21Q9UK80 565 aa19.65■□□□□ 0.74
PPFIA4-207ENST00000594656 ROBO2Q9HCK4 1378 aa19.63■□□□□ 0.73
PPFIA4-207ENST00000594656 TRPC5Q9UL62 973 aaPredicted RBP19.63■□□□□ 0.73
PPFIA4-207ENST00000594656 NEXMIFQ5QGS0 1516 aa19.62■□□□□ 0.73
PPFIA4-207ENST00000594656 VGFO15240 615 aaPredicted RBP19.6■□□□□ 0.73
PPFIA4-207ENST00000594656 PPARGC1BQ86YN6 1023 aaKnown RBP19.6■□□□□ 0.73
PPFIA4-207ENST00000594656 ATAD2Q6PL18 1390 aa19.59■□□□□ 0.73
PPFIA4-207ENST00000594656 SPHKAPQ2M3C7 1700 aa19.59■□□□□ 0.73
PPFIA4-207ENST00000594656 NALCNQ8IZF0 1738 aa19.59■□□□□ 0.73
PPFIA4-207ENST00000594656 PTCH1Q13635 1447 aa19.58■□□□□ 0.72
PPFIA4-207ENST00000594656 LAMC1P11047 1609 aa19.58■□□□□ 0.72
PPFIA4-207ENST00000594656 CLTCL1P53675 1640 aa19.57■□□□□ 0.72
PPFIA4-207ENST00000594656 ATRNO75882 1429 aa19.57■□□□□ 0.72
PPFIA4-207ENST00000594656 RPGRIP1LQ68CZ1 1315 aa19.54■□□□□ 0.72
PPFIA4-207ENST00000594656 BCL9LQ86UU0 1499 aa19.54■□□□□ 0.72
PPFIA4-207ENST00000594656 PRAG1Q86YV5 1406 aa19.53■□□□□ 0.72
PPFIA4-207ENST00000594656 ESCO1Q5FWF5 840 aa19.53■□□□□ 0.72
PPFIA4-207ENST00000594656 ZRANB1Q9UGI0 708 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms