RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 CHD2O14647 1828 aaKnown RBP23.96■■□□□ 1.43
FOXA3-202ENST00000594297 GCC2Q8IWJ2 1684 aa23.96■■□□□ 1.43
FOXA3-202ENST00000594297 FGD6Q6ZV73 1430 aa23.93■■□□□ 1.42
FOXA3-202ENST00000594297 JCADQ9P266 1359 aa23.93■■□□□ 1.42
FOXA3-202ENST00000594297 ZFYVE9O95405 1425 aa23.93■■□□□ 1.42
FOXA3-202ENST00000594297 LRP6O75581 1613 aa23.92■■□□□ 1.42
FOXA3-202ENST00000594297 ANKRD30AQ9BXX3 1397 aa23.91■■□□□ 1.42
FOXA3-202ENST00000594297 TMEM131LA2VDJ0 1609 aa23.88■■□□□ 1.41
FOXA3-202ENST00000594297 SLAIN2Q9P270 581 aa23.88■■□□□ 1.41
FOXA3-202ENST00000594297 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
FOXA3-202ENST00000594297 PLEKHG1Q9ULL1 1385 aa23.88■■□□□ 1.41
FOXA3-202ENST00000594297 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
FOXA3-202ENST00000594297 BCANQ96GW7 911 aa23.87■■□□□ 1.41
FOXA3-202ENST00000594297 ADGRL2O95490 1459 aa23.87■■□□□ 1.41
FOXA3-202ENST00000594297 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
FOXA3-202ENST00000594297 RIMS2Q9UQ26 1411 aa23.85■■□□□ 1.41
FOXA3-202ENST00000594297 AHDC1Q5TGY3 1603 aaPredicted RBP23.85■■□□□ 1.41
FOXA3-202ENST00000594297 SLC52A1Q9NWF4 448 aa23.85■■□□□ 1.41
FOXA3-202ENST00000594297 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.84■■□□□ 1.41
FOXA3-202ENST00000594297 DIP2AQ14689 1571 aa23.81■■□□□ 1.4
FOXA3-202ENST00000594297 NCOA3Q9Y6Q9 1424 aa23.79■■□□□ 1.4
FOXA3-202ENST00000594297 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
FOXA3-202ENST00000594297 SPATA31A6Q5VVP1 1343 aa23.79■■□□□ 1.4
FOXA3-202ENST00000594297 UNC13BO14795 1591 aa23.78■■□□□ 1.4
FOXA3-202ENST00000594297 ADAMTS13Q76LX8 1427 aa23.77■■□□□ 1.4
FOXA3-202ENST00000594297 ANKRD50Q9ULJ7 1429 aa23.76■■□□□ 1.39
FOXA3-202ENST00000594297 E9PCH4 1651 aa23.76■■□□□ 1.39
FOXA3-202ENST00000594297 MEX3CQ5U5Q3 659 aaKnown RBP23.75■■□□□ 1.39
FOXA3-202ENST00000594297 UPF1Q92900 1129 aaKnown RBP eCLIP23.74■■□□□ 1.39
FOXA3-202ENST00000594297 TRIM52Q96A61 297 aa23.74■■□□□ 1.39
FOXA3-202ENST00000594297 C14orf37Q86TY3 774 aa23.73■■□□□ 1.39
FOXA3-202ENST00000594297 TBX22Q9Y458 520 aa23.73■■□□□ 1.39
FOXA3-202ENST00000594297 APLP2Q06481 763 aa23.72■■□□□ 1.39
FOXA3-202ENST00000594297 ZNF772Q68DY9 489 aaPredicted RBP23.72■■□□□ 1.39
FOXA3-202ENST00000594297 TRPM2O94759 1503 aa23.72■■□□□ 1.39
FOXA3-202ENST00000594297 PIK3R4Q99570 1358 aa23.69■■□□□ 1.38
FOXA3-202ENST00000594297 CADPS2Q86UW7 1296 aa23.69■■□□□ 1.38
FOXA3-202ENST00000594297 XRN1Q8IZH2 1706 aaKnown RBP23.68■■□□□ 1.38
FOXA3-202ENST00000594297 HDGFP51858 240 aaKnown RBP23.68■■□□□ 1.38
FOXA3-202ENST00000594297 NUTM2DQ5VT03 806 aaPredicted RBP23.68■■□□□ 1.38
FOXA3-202ENST00000594297 NHSL1Q5SYE7 1610 aa23.68■■□□□ 1.38
FOXA3-202ENST00000594297 ASXL1Q8IXJ9 1541 aa23.68■■□□□ 1.38
FOXA3-202ENST00000594297 IQGAP3Q86VI3 1631 aa23.67■■□□□ 1.38
FOXA3-202ENST00000594297 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.67■■□□□ 1.38
FOXA3-202ENST00000594297 CDK12Q9NYV4 1490 aaPredicted RBP23.67■■□□□ 1.38
FOXA3-202ENST00000594297 PTPRUQ92729 1446 aa23.67■■□□□ 1.38
FOXA3-202ENST00000594297 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
FOXA3-202ENST00000594297 ATF3P18847 181 aa23.66■■□□□ 1.38
FOXA3-202ENST00000594297 C19orf44Q9H6X5 657 aa23.66■■□□□ 1.38
FOXA3-202ENST00000594297 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
FOXA3-202ENST00000594297 BRINP3Q76B58 766 aa23.64■■□□□ 1.37
FOXA3-202ENST00000594297 DCCP43146 1447 aa23.64■■□□□ 1.37
FOXA3-202ENST00000594297 FAM50AQ14320 339 aaKnown RBP23.63■■□□□ 1.37
FOXA3-202ENST00000594297 NUTM2BA6NNL0 878 aaPredicted RBP23.61■■□□□ 1.37
FOXA3-202ENST00000594297 NUTM2EB1AL46 878 aaPredicted RBP23.61■■□□□ 1.37
FOXA3-202ENST00000594297 RXRBP28702 533 aa23.61■■□□□ 1.37
FOXA3-202ENST00000594297 NUTM2AQ8IVF1 878 aaPredicted RBP23.61■■□□□ 1.37
FOXA3-202ENST00000594297 AFF2P51816 1311 aa23.59■■□□□ 1.37
FOXA3-202ENST00000594297 MST1RQ04912 1400 aa23.59■■□□□ 1.37
FOXA3-202ENST00000594297 SETD5Q9C0A6 1442 aa23.59■■□□□ 1.37
FOXA3-202ENST00000594297 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
FOXA3-202ENST00000594297 AMOTL2Q9Y2J4 779 aa23.58■■□□□ 1.37
FOXA3-202ENST00000594297 RGS12O14924 1447 aa23.58■■□□□ 1.36
FOXA3-202ENST00000594297 NALCNQ8IZF0 1738 aa23.57■■□□□ 1.36
FOXA3-202ENST00000594297 SPHKAPQ2M3C7 1700 aa23.54■■□□□ 1.36
FOXA3-202ENST00000594297 PNPLA6Q8IY17 1366 aa23.51■■□□□ 1.35
FOXA3-202ENST00000594297 ADGRL3Q9HAR2 1447 aa23.5■■□□□ 1.35
FOXA3-202ENST00000594297 ROCK1Q13464 1354 aa23.49■■□□□ 1.35
FOXA3-202ENST00000594297 DDX17Q92841 729 aaKnown RBP23.47■■□□□ 1.35
FOXA3-202ENST00000594297 C8orf37Q96NL8 207 aa23.47■■□□□ 1.35
FOXA3-202ENST00000594297 METP08581 1390 aa23.47■■□□□ 1.35
FOXA3-202ENST00000594297 NUP155O75694 1391 aa23.46■■□□□ 1.35
FOXA3-202ENST00000594297 LAMC1P11047 1609 aa23.46■■□□□ 1.35
FOXA3-202ENST00000594297 NEXMIFQ5QGS0 1516 aa23.45■■□□□ 1.34
FOXA3-202ENST00000594297 LRRC59Q96AG4 307 aaKnown RBP23.45■■□□□ 1.34
FOXA3-202ENST00000594297 RBM6P78332 1123 aaKnown RBP23.43■■□□□ 1.34
FOXA3-202ENST00000594297 CLTCL1P53675 1640 aa23.43■■□□□ 1.34
FOXA3-202ENST00000594297 QTRT2Q9H974 415 aaKnown RBP23.42■■□□□ 1.34
FOXA3-202ENST00000594297 C1orf167Q5SNV9 1468 aa23.4■■□□□ 1.34
FOXA3-202ENST00000594297 ZNF326Q5BKZ1 582 aaKnown RBP23.38■■□□□ 1.33
FOXA3-202ENST00000594297 SRCAPQ6ZRS2 3230 aa23.37■■□□□ 1.33
FOXA3-202ENST00000594297 ADAMTS2O95450 1211 aa23.36■■□□□ 1.33
FOXA3-202ENST00000594297 ATAD2Q6PL18 1390 aa23.36■■□□□ 1.33
FOXA3-202ENST00000594297 COL22A1Q8NFW1 1626 aaPredicted RBP23.36■■□□□ 1.33
FOXA3-202ENST00000594297 PTCH1Q13635 1447 aa23.35■■□□□ 1.33
FOXA3-202ENST00000594297 KIF1BO60333 1816 aa23.34■■□□□ 1.33
FOXA3-202ENST00000594297 NGLY1Q96IV0 654 aa23.34■■□□□ 1.33
FOXA3-202ENST00000594297 SOS2Q07890 1332 aaPredicted RBP23.3■■□□□ 1.32
FOXA3-202ENST00000594297 ATRNO75882 1429 aa23.29■■□□□ 1.32
FOXA3-202ENST00000594297 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
FOXA3-202ENST00000594297 ROBO2Q9HCK4 1378 aa23.28■■□□□ 1.32
FOXA3-202ENST00000594297 EP400Q96L91 3159 aa23.28■■□□□ 1.32
FOXA3-202ENST00000594297 PRAG1Q86YV5 1406 aa23.28■■□□□ 1.32
FOXA3-202ENST00000594297 ITGAEP38570 1179 aa23.28■■□□□ 1.32
FOXA3-202ENST00000594297 PPARGC1BQ86YN6 1023 aaKnown RBP23.28■■□□□ 1.32
FOXA3-202ENST00000594297 USP21Q9UK80 565 aa23.28■■□□□ 1.32
FOXA3-202ENST00000594297 ORAI2Q96SN7 254 aa23.27■■□□□ 1.32
FOXA3-202ENST00000594297 MYOM2P54296 1465 aa23.26■■□□□ 1.31
FOXA3-202ENST00000594297 TRPC5Q9UL62 973 aaPredicted RBP23.25■■□□□ 1.31
FOXA3-202ENST00000594297 CDC42BPGQ6DT37 1551 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms