RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 KDM5AP29375 1690 aaKnown RBP14.53□□□□□ -0.08
SRRM1-221ENST00000593639 DAPK1P53355 1430 aa14.53□□□□□ -0.08
SRRM1-221ENST00000593639 SPATA31A6Q5VVP1 1343 aa14.53□□□□□ -0.08
SRRM1-221ENST00000593639 ZNF772Q68DY9 489 aaPredicted RBP14.53□□□□□ -0.08
SRRM1-221ENST00000593639 CHIC2Q9UKJ5 165 aa14.53□□□□□ -0.08
SRRM1-221ENST00000593639 ZFYVE9O95405 1425 aa14.52□□□□□ -0.08
SRRM1-221ENST00000593639 PLEKHG1Q9ULL1 1385 aa14.52□□□□□ -0.08
SRRM1-221ENST00000593639 MEX3CQ5U5Q3 659 aaKnown RBP14.52□□□□□ -0.09
SRRM1-221ENST00000593639 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.09
SRRM1-221ENST00000593639 FGD6Q6ZV73 1430 aa14.51□□□□□ -0.09
SRRM1-221ENST00000593639 PHLPP1O60346 1717 aa14.51□□□□□ -0.09
SRRM1-221ENST00000593639 ANKRD30AQ9BXX3 1397 aa14.5□□□□□ -0.09
SRRM1-221ENST00000593639 PPP1R15AO75807 674 aaPredicted RBP14.49□□□□□ -0.09
SRRM1-221ENST00000593639 TBX22Q9Y458 520 aa14.49□□□□□ -0.09
SRRM1-221ENST00000593639 RIMS2Q9UQ26 1411 aa14.49□□□□□ -0.09
SRRM1-221ENST00000593639 NCOA3Q9Y6Q9 1424 aa14.49□□□□□ -0.09
SRRM1-221ENST00000593639 LOC105371045A0A1W2PR82 267 aa14.48□□□□□ -0.09
SRRM1-221ENST00000593639 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
SRRM1-221ENST00000593639 CROCC2H7BZ55 1655 aa14.47□□□□□ -0.09
SRRM1-221ENST00000593639 RXRBP28702 533 aa14.47□□□□□ -0.09
SRRM1-221ENST00000593639 CADPS2Q86UW7 1296 aa14.47□□□□□ -0.09
SRRM1-221ENST00000593639 PTPN23Q9H3S7 1636 aa14.47□□□□□ -0.09
SRRM1-221ENST00000593639 HDGFP51858 240 aaKnown RBP14.46□□□□□ -0.09
SRRM1-221ENST00000593639 C19orf44Q9H6X5 657 aa14.46□□□□□ -0.09
SRRM1-221ENST00000593639 ATF3P18847 181 aa14.45□□□□□ -0.1
SRRM1-221ENST00000593639 NUTM2DQ5VT03 806 aaPredicted RBP14.45□□□□□ -0.1
SRRM1-221ENST00000593639 BRINP3Q76B58 766 aa14.45□□□□□ -0.1
SRRM1-221ENST00000593639 ADAMTS13Q76LX8 1427 aa14.45□□□□□ -0.1
SRRM1-221ENST00000593639 AHDC1Q5TGY3 1603 aaPredicted RBP14.44□□□□□ -0.1
SRRM1-221ENST00000593639 RPRD2Q5VT52 1461 aaKnown RBP14.44□□□□□ -0.1
SRRM1-221ENST00000593639 NUTM2BA6NNL0 878 aaPredicted RBP14.44□□□□□ -0.1
SRRM1-221ENST00000593639 NUTM2EB1AL46 878 aaPredicted RBP14.44□□□□□ -0.1
SRRM1-221ENST00000593639 NUTM2AQ8IVF1 878 aaPredicted RBP14.44□□□□□ -0.1
SRRM1-221ENST00000593639 CHGAP10645 457 aaKnown RBP14.42□□□□□ -0.1
SRRM1-221ENST00000593639 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.42□□□□□ -0.1
SRRM1-221ENST00000593639 AFF2P51816 1311 aa14.41□□□□□ -0.1
SRRM1-221ENST00000593639 PIK3R4Q99570 1358 aa14.41□□□□□ -0.1
SRRM1-221ENST00000593639 CDK12Q9NYV4 1490 aaPredicted RBP14.41□□□□□ -0.1
SRRM1-221ENST00000593639 CHD2O14647 1828 aaKnown RBP14.41□□□□□ -0.1
SRRM1-221ENST00000593639 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
SRRM1-221ENST00000593639 DIP2AQ14689 1571 aa14.4□□□□□ -0.1
SRRM1-221ENST00000593639 ADGRL2O95490 1459 aa14.4□□□□□ -0.1
SRRM1-221ENST00000593639 AMOTL2Q9Y2J4 779 aa14.4□□□□□ -0.1
SRRM1-221ENST00000593639 TMEM131LA2VDJ0 1609 aa14.4□□□□□ -0.1
SRRM1-221ENST00000593639 PTPRUQ92729 1446 aa14.4□□□□□ -0.1
SRRM1-221ENST00000593639 SHPRHQ149N8 1683 aa14.39□□□□□ -0.11
SRRM1-221ENST00000593639 SETD5Q9C0A6 1442 aa14.38□□□□□ -0.11
SRRM1-221ENST00000593639 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.38□□□□□ -0.11
SRRM1-221ENST00000593639 APLP2Q06481 763 aa14.37□□□□□ -0.11
SRRM1-221ENST00000593639 RGS12O14924 1447 aa14.37□□□□□ -0.11
SRRM1-221ENST00000593639 ASXL1Q8IXJ9 1541 aa14.36□□□□□ -0.11
SRRM1-221ENST00000593639 C8orf37Q96NL8 207 aa14.36□□□□□ -0.11
SRRM1-221ENST00000593639 DCCP43146 1447 aa14.35□□□□□ -0.11
SRRM1-221ENST00000593639 FAM50AQ14320 339 aaKnown RBP14.35□□□□□ -0.11
SRRM1-221ENST00000593639 DDX17Q92841 729 aaKnown RBP14.35□□□□□ -0.11
SRRM1-221ENST00000593639 QTRT2Q9H974 415 aaKnown RBP14.35□□□□□ -0.11
SRRM1-221ENST00000593639 GCC2Q8IWJ2 1684 aa14.35□□□□□ -0.11
SRRM1-221ENST00000593639 MST1RQ04912 1400 aa14.34□□□□□ -0.11
SRRM1-221ENST00000593639 RBM6P78332 1123 aaKnown RBP14.34□□□□□ -0.11
SRRM1-221ENST00000593639 LRRC59Q96AG4 307 aaKnown RBP14.34□□□□□ -0.11
SRRM1-221ENST00000593639 MYO5BQ9ULV0 1848 aa14.32□□□□□ -0.12
SRRM1-221ENST00000593639 TRPM2O94759 1503 aa14.32□□□□□ -0.12
SRRM1-221ENST00000593639 PNPLA6Q8IY17 1366 aa14.32□□□□□ -0.12
SRRM1-221ENST00000593639 ADAMTS2O95450 1211 aa14.3□□□□□ -0.12
SRRM1-221ENST00000593639 METP08581 1390 aa14.3□□□□□ -0.12
SRRM1-221ENST00000593639 UNC13BO14795 1591 aa14.28□□□□□ -0.12
SRRM1-221ENST00000593639 NGLY1Q96IV0 654 aa14.28□□□□□ -0.12
SRRM1-221ENST00000593639 EP400Q96L91 3159 aa14.27□□□□□ -0.13
SRRM1-221ENST00000593639 NHSL1Q5SYE7 1610 aa14.26□□□□□ -0.13
SRRM1-221ENST00000593639 ADGRL3Q9HAR2 1447 aa14.26□□□□□ -0.13
SRRM1-221ENST00000593639 ATAD2Q6PL18 1390 aa14.26□□□□□ -0.13
SRRM1-221ENST00000593639 XRN1Q8IZH2 1706 aaKnown RBP14.26□□□□□ -0.13
SRRM1-221ENST00000593639 E9PCH4 1651 aa14.26□□□□□ -0.13
SRRM1-221ENST00000593639 NUP155O75694 1391 aa14.25□□□□□ -0.13
SRRM1-221ENST00000593639 USP21Q9UK80 565 aa14.25□□□□□ -0.13
SRRM1-221ENST00000593639 NRXN3Q9Y4C0 1643 aa14.25□□□□□ -0.13
SRRM1-221ENST00000593639 SETBP1Q9Y6X0 1596 aa14.25□□□□□ -0.13
SRRM1-221ENST00000593639 ZNF326Q5BKZ1 582 aaKnown RBP14.23□□□□□ -0.13
SRRM1-221ENST00000593639 FNBP4Q8N3X1 1017 aaPredicted RBP14.23□□□□□ -0.13
SRRM1-221ENST00000593639 TRPC5Q9UL62 973 aaPredicted RBP14.23□□□□□ -0.13
SRRM1-221ENST00000593639 C1orf167Q5SNV9 1468 aa14.23□□□□□ -0.13
SRRM1-221ENST00000593639 ROCK1Q13464 1354 aa14.22□□□□□ -0.13
SRRM1-221ENST00000593639 SOS2Q07890 1332 aaPredicted RBP14.22□□□□□ -0.13
SRRM1-221ENST00000593639 ORAI2Q96SN7 254 aa14.22□□□□□ -0.13
SRRM1-221ENST00000593639 ZRANB1Q9UGI0 708 aa14.22□□□□□ -0.13
SRRM1-221ENST00000593639 IQGAP3Q86VI3 1631 aa14.21□□□□□ -0.13
SRRM1-221ENST00000593639 ATRNO75882 1429 aa14.2□□□□□ -0.14
SRRM1-221ENST00000593639 PTCH1Q13635 1447 aa14.18□□□□□ -0.14
SRRM1-221ENST00000593639 ROBO2Q9HCK4 1378 aa14.18□□□□□ -0.14
SRRM1-221ENST00000593639 FOXD1Q16676 465 aa14.17□□□□□ -0.14
SRRM1-221ENST00000593639 NALCNQ8IZF0 1738 aa14.16□□□□□ -0.14
SRRM1-221ENST00000593639 BCL9LQ86UU0 1499 aa14.15□□□□□ -0.14
SRRM1-221ENST00000593639 LAMC1P11047 1609 aa14.15□□□□□ -0.14
SRRM1-221ENST00000593639 NEXMIFQ5QGS0 1516 aa14.15□□□□□ -0.14
SRRM1-221ENST00000593639 MYOM2P54296 1465 aa14.14□□□□□ -0.15
SRRM1-221ENST00000593639 ITGAEP38570 1179 aa14.14□□□□□ -0.15
SRRM1-221ENST00000593639 CCDC125Q86Z20 511 aa14.14□□□□□ -0.15
SRRM1-221ENST00000593639 GJD4Q96KN9 370 aaPredicted RBP14.13□□□□□ -0.15
SRRM1-221ENST00000593639 XPCQ01831 940 aaPredicted RBP14.11□□□□□ -0.15
SRRM1-221ENST00000593639 PRAG1Q86YV5 1406 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms