RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 PLEKHG1Q9ULL1 1385 aa25.36■■□□□ 1.65
AP3D1-212ENST00000592488 SLC26A8Q96RN1 970 aa25.36■■□□□ 1.65
AP3D1-212ENST00000592488 TOM1O60784 492 aa25.35■■□□□ 1.65
AP3D1-212ENST00000592488 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.34■■□□□ 1.65
AP3D1-212ENST00000592488 TRIM52Q96A61 297 aa25.34■■□□□ 1.65
AP3D1-212ENST00000592488 BCANQ96GW7 911 aa25.34■■□□□ 1.65
AP3D1-212ENST00000592488 TRPM2O94759 1503 aa25.32■■□□□ 1.64
AP3D1-212ENST00000592488 KCNA6P17658 529 aa25.3■■□□□ 1.64
AP3D1-212ENST00000592488 SCAF1Q9H7N4 1312 aaKnown RBP25.3■■□□□ 1.64
AP3D1-212ENST00000592488 CLTCL1P53675 1640 aa25.29■■□□□ 1.64
AP3D1-212ENST00000592488 NWD1Q149M9 1564 aa25.28■■□□□ 1.64
AP3D1-212ENST00000592488 ALKQ9UM73 1620 aa25.28■■□□□ 1.64
AP3D1-212ENST00000592488 PIP4K2BP78356 416 aa25.28■■□□□ 1.64
AP3D1-212ENST00000592488 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
AP3D1-212ENST00000592488 SLC4A1APQ9BWU0 796 aaKnown RBP25.27■■□□□ 1.64
AP3D1-212ENST00000592488 NKTRP30414 1462 aaKnown RBP25.27■■□□□ 1.64
AP3D1-212ENST00000592488 XIRP1Q702N8 1843 aaKnown RBP25.26■■□□□ 1.63
AP3D1-212ENST00000592488 NUTM2DQ5VT03 806 aaPredicted RBP25.26■■□□□ 1.63
AP3D1-212ENST00000592488 DIP2AQ14689 1571 aa25.24■■□□□ 1.63
AP3D1-212ENST00000592488 TMEM94Q12767 1356 aa25.23■■□□□ 1.63
AP3D1-212ENST00000592488 TBX22Q9Y458 520 aa25.23■■□□□ 1.63
AP3D1-212ENST00000592488 ADAMTS13Q76LX8 1427 aa25.22■■□□□ 1.63
AP3D1-212ENST00000592488 ZNF326Q5BKZ1 582 aaKnown RBP25.22■■□□□ 1.63
AP3D1-212ENST00000592488 CHD2O14647 1828 aaKnown RBP25.21■■□□□ 1.63
AP3D1-212ENST00000592488 KIF1BO60333 1816 aa25.21■■□□□ 1.63
AP3D1-212ENST00000592488 PROSER2Q86WR7 435 aaPredicted RBP25.2■■□□□ 1.62
AP3D1-212ENST00000592488 HSPA1LP34931 641 aa25.17■■□□□ 1.62
AP3D1-212ENST00000592488 PIK3R4Q99570 1358 aa25.17■■□□□ 1.62
AP3D1-212ENST00000592488 NEXMIFQ5QGS0 1516 aa25.17■■□□□ 1.62
AP3D1-212ENST00000592488 SETD5Q9C0A6 1442 aa25.16■■□□□ 1.62
AP3D1-212ENST00000592488 SETBP1Q9Y6X0 1596 aa25.16■■□□□ 1.62
AP3D1-212ENST00000592488 ACIN1Q9UKV3 1341 aaKnown RBP25.14■■□□□ 1.62
AP3D1-212ENST00000592488 NRXN3Q9Y4C0 1643 aa25.14■■□□□ 1.61
AP3D1-212ENST00000592488 RBM33Q96EV2 1170 aaKnown RBP25.13■■□□□ 1.61
AP3D1-212ENST00000592488 FOXD1Q16676 465 aa25.12■■□□□ 1.61
AP3D1-212ENST00000592488 MPHOSPH9Q99550 1183 aa25.12■■□□□ 1.61
AP3D1-212ENST00000592488 DISP3Q9P2K9 1392 aa25.1■■□□□ 1.61
AP3D1-212ENST00000592488 MSH6P52701 1360 aa25.09■■□□□ 1.61
AP3D1-212ENST00000592488 CCDC144AA2RUR9 1427 aa25.08■■□□□ 1.61
AP3D1-212ENST00000592488 NCOA3Q9Y6Q9 1424 aa25.07■■□□□ 1.6
AP3D1-212ENST00000592488 RAB3GAP2Q9H2M9 1393 aa25.06■■□□□ 1.6
AP3D1-212ENST00000592488 PTPRUQ92729 1446 aa25.06■■□□□ 1.6
AP3D1-212ENST00000592488 RPGRIP1LQ68CZ1 1315 aa25.06■■□□□ 1.6
AP3D1-212ENST00000592488 AMOTL2Q9Y2J4 779 aa25.05■■□□□ 1.6
AP3D1-212ENST00000592488 FAM135BQ49AJ0 1406 aa25.04■■□□□ 1.6
AP3D1-212ENST00000592488 XRN1Q8IZH2 1706 aaKnown RBP25.04■■□□□ 1.6
AP3D1-212ENST00000592488 VGFO15240 615 aaPredicted RBP25.04■■□□□ 1.6
AP3D1-212ENST00000592488 METP08581 1390 aa25.03■■□□□ 1.6
AP3D1-212ENST00000592488 PPLO60437 1756 aa25.03■■□□□ 1.6
AP3D1-212ENST00000592488 C14orf37Q86TY3 774 aa25.02■■□□□ 1.6
AP3D1-212ENST00000592488 ROBO1Q9Y6N7 1651 aa25■■□□□ 1.59
AP3D1-212ENST00000592488 SPATA31E1Q6ZUB1 1445 aa24.99■■□□□ 1.59
AP3D1-212ENST00000592488 SLAIN2Q9P270 581 aa24.97■■□□□ 1.59
AP3D1-212ENST00000592488 SETD1AO15047 1707 aaKnown RBP24.96■■□□□ 1.59
AP3D1-212ENST00000592488 C19orf44Q9H6X5 657 aa24.96■■□□□ 1.59
AP3D1-212ENST00000592488 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.95■■□□□ 1.59
AP3D1-212ENST00000592488 MED1Q15648 1581 aaPredicted RBP24.95■■□□□ 1.58
AP3D1-212ENST00000592488 RGL3Q3MIN7 710 aa24.93■■□□□ 1.58
AP3D1-212ENST00000592488 CADPS2Q86UW7 1296 aa24.93■■□□□ 1.58
AP3D1-212ENST00000592488 ATF3P18847 181 aa24.92■■□□□ 1.58
AP3D1-212ENST00000592488 IFT172Q9UG01 1749 aa24.92■■□□□ 1.58
AP3D1-212ENST00000592488 ANKRD30BQ9BXX2 1392 aa24.92■■□□□ 1.58
AP3D1-212ENST00000592488 DCCP43146 1447 aa24.91■■□□□ 1.58
AP3D1-212ENST00000592488 HRCP23327 699 aa24.89■■□□□ 1.58
AP3D1-212ENST00000592488 ADGRF5Q8IZF2 1346 aa24.88■■□□□ 1.57
AP3D1-212ENST00000592488 PTCH1Q13635 1447 aa24.88■■□□□ 1.57
AP3D1-212ENST00000592488 PRAG1Q86YV5 1406 aa24.86■■□□□ 1.57
AP3D1-212ENST00000592488 ADGRL3Q9HAR2 1447 aa24.86■■□□□ 1.57
AP3D1-212ENST00000592488 ILDR2Q71H61 639 aa24.85■■□□□ 1.57
AP3D1-212ENST00000592488 PHLPP1O60346 1717 aa24.84■■□□□ 1.57
AP3D1-212ENST00000592488 NALCNQ8IZF0 1738 aa24.84■■□□□ 1.57
AP3D1-212ENST00000592488 ROBO2Q9HCK4 1378 aa24.83■■□□□ 1.57
AP3D1-212ENST00000592488 PIK3C2GO75747 1445 aa24.82■■□□□ 1.56
AP3D1-212ENST00000592488 MST1RQ04912 1400 aa24.8■■□□□ 1.56
AP3D1-212ENST00000592488 MYOM2P54296 1465 aa24.79■■□□□ 1.56
AP3D1-212ENST00000592488 AHDC1Q5TGY3 1603 aaPredicted RBP24.79■■□□□ 1.56
AP3D1-212ENST00000592488 PHF23Q9BUL5 403 aaPredicted RBP24.78■■□□□ 1.56
AP3D1-212ENST00000592488 COL16A1Q07092 1604 aaPredicted RBP24.78■■□□□ 1.56
AP3D1-212ENST00000592488 BRINP3Q76B58 766 aa24.77■■□□□ 1.56
AP3D1-212ENST00000592488 NRXN1Q9ULB1 1477 aa24.77■■□□□ 1.56
AP3D1-212ENST00000592488 ASXL1Q8IXJ9 1541 aa24.76■■□□□ 1.55
AP3D1-212ENST00000592488 JCADQ9P266 1359 aa24.75■■□□□ 1.55
AP3D1-212ENST00000592488 TECPR2O15040 1411 aa24.75■■□□□ 1.55
AP3D1-212ENST00000592488 LRPPRCP42704 1394 aaKnown RBP24.74■■□□□ 1.55
AP3D1-212ENST00000592488 LAMC1P11047 1609 aa24.73■■□□□ 1.55
AP3D1-212ENST00000592488 KNDC1Q76NI1 1749 aa24.72■■□□□ 1.55
AP3D1-212ENST00000592488 ABCC11Q96J66 1382 aa24.71■■□□□ 1.55
AP3D1-212ENST00000592488 TMEM132EQ6IEE7 984 aa24.71■■□□□ 1.55
AP3D1-212ENST00000592488 STK26Q9P289 416 aa24.71■■□□□ 1.55
AP3D1-212ENST00000592488 C14orf93Q9H972 538 aaKnown RBP24.7■■□□□ 1.54
AP3D1-212ENST00000592488 YTHDC2Q9H6S0 1430 aaKnown RBP24.69■■□□□ 1.54
AP3D1-212ENST00000592488 NHSL1Q5SYE7 1610 aa24.69■■□□□ 1.54
AP3D1-212ENST00000592488 C1orf167Q5SNV9 1468 aa24.69■■□□□ 1.54
AP3D1-212ENST00000592488 CDC42BPGQ6DT37 1551 aa24.67■■□□□ 1.54
AP3D1-212ENST00000592488 CFAP70Q5T0N1 1121 aa24.66■■□□□ 1.54
AP3D1-212ENST00000592488 SOCS7O14512 581 aa24.65■■□□□ 1.54
AP3D1-212ENST00000592488 SHPRHQ149N8 1683 aa24.65■■□□□ 1.54
AP3D1-212ENST00000592488 WAPLQ7Z5K2 1190 aa24.64■■□□□ 1.54
AP3D1-212ENST00000592488 DHX57Q6P158 1386 aaKnown RBP24.64■■□□□ 1.53
AP3D1-212ENST00000592488 SPATA31A6Q5VVP1 1343 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms