RNA–Protein interactions for RNA: ENST00000592194.1

PRKAR1A-220, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-220ENST00000592194 RNF216Q9NWF9 866 aaPredicted RBP20.89■□□□□ 0.93
PRKAR1A-220ENST00000592194 RPRD2Q5VT52 1461 aaKnown RBP20.88■□□□□ 0.93
PRKAR1A-220ENST00000592194 ROCK1Q13464 1354 aa20.86■□□□□ 0.93
PRKAR1A-220ENST00000592194 KCNA6P17658 529 aa20.86■□□□□ 0.93
PRKAR1A-220ENST00000592194 HOXD11P31277 338 aaPredicted RBP20.86■□□□□ 0.93
PRKAR1A-220ENST00000592194 SLC26A8Q96RN1 970 aa20.86■□□□□ 0.93
PRKAR1A-220ENST00000592194 ADGRB3O60242 1522 aa20.85■□□□□ 0.93
PRKAR1A-220ENST00000592194 MYO5BQ9ULV0 1848 aa20.85■□□□□ 0.93
PRKAR1A-220ENST00000592194 UNC13BO14795 1591 aa20.83■□□□□ 0.92
PRKAR1A-220ENST00000592194 GCC2Q8IWJ2 1684 aa20.82■□□□□ 0.92
PRKAR1A-220ENST00000592194 MED1Q15648 1581 aaPredicted RBP20.8■□□□□ 0.92
PRKAR1A-220ENST00000592194 ZFYVE9O95405 1425 aa20.8■□□□□ 0.92
PRKAR1A-220ENST00000592194 E9PCH4 1651 aa20.8■□□□□ 0.92
PRKAR1A-220ENST00000592194 TMEM131LA2VDJ0 1609 aa20.79■□□□□ 0.92
PRKAR1A-220ENST00000592194 TMEM94Q12767 1356 aa20.79■□□□□ 0.92
PRKAR1A-220ENST00000592194 ITGAEP38570 1179 aa20.78■□□□□ 0.92
PRKAR1A-220ENST00000592194 PROSER2Q86WR7 435 aaPredicted RBP20.78■□□□□ 0.92
PRKAR1A-220ENST00000592194 KCNA4P22459 653 aa20.77■□□□□ 0.92
PRKAR1A-220ENST00000592194 HDGFP51858 240 aaKnown RBP20.77■□□□□ 0.92
PRKAR1A-220ENST00000592194 RBM33Q96EV2 1170 aaKnown RBP20.77■□□□□ 0.92
PRKAR1A-220ENST00000592194 IQGAP3Q86VI3 1631 aa20.76■□□□□ 0.91
PRKAR1A-220ENST00000592194 RIMS2Q9UQ26 1411 aa20.76■□□□□ 0.91
PRKAR1A-220ENST00000592194 NUP155O75694 1391 aa20.75■□□□□ 0.91
PRKAR1A-220ENST00000592194 PLEKHG1Q9ULL1 1385 aa20.75■□□□□ 0.91
PRKAR1A-220ENST00000592194 DCAF8L1A6NGE4 600 aa20.75■□□□□ 0.91
PRKAR1A-220ENST00000592194 BCANQ96GW7 911 aa20.75■□□□□ 0.91
PRKAR1A-220ENST00000592194 CHD2O14647 1828 aaKnown RBP20.75■□□□□ 0.91
PRKAR1A-220ENST00000592194 FAM135BQ49AJ0 1406 aa20.75■□□□□ 0.91
PRKAR1A-220ENST00000592194 RRBP1Q9P2E9 1410 aaKnown RBP20.74■□□□□ 0.91
PRKAR1A-220ENST00000592194 CHGAP10645 457 aaKnown RBP20.73■□□□□ 0.91
PRKAR1A-220ENST00000592194 TBX22Q9Y458 520 aa20.73■□□□□ 0.91
PRKAR1A-220ENST00000592194 NWD1Q149M9 1564 aa20.72■□□□□ 0.91
PRKAR1A-220ENST00000592194 NPM3O75607 178 aaKnown RBP20.72■□□□□ 0.91
PRKAR1A-220ENST00000592194 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.72■□□□□ 0.91
PRKAR1A-220ENST00000592194 NKTRP30414 1462 aaKnown RBP20.7■□□□□ 0.9
PRKAR1A-220ENST00000592194 PPP1R15AO75807 674 aaPredicted RBP20.69■□□□□ 0.9
PRKAR1A-220ENST00000592194 NUTM2DQ5VT03 806 aaPredicted RBP20.69■□□□□ 0.9
PRKAR1A-220ENST00000592194 ADAMTS13Q76LX8 1427 aa20.68■□□□□ 0.9
PRKAR1A-220ENST00000592194 SLAIN2Q9P270 581 aa20.64■□□□□ 0.89
PRKAR1A-220ENST00000592194 RGS17Q9UGC6 210 aaPredicted RBP20.64■□□□□ 0.89
PRKAR1A-220ENST00000592194 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.89
PRKAR1A-220ENST00000592194 MSH6P52701 1360 aa20.63■□□□□ 0.89
PRKAR1A-220ENST00000592194 NCOA3Q9Y6Q9 1424 aa20.61■□□□□ 0.89
PRKAR1A-220ENST00000592194 PIK3R4Q99570 1358 aa20.61■□□□□ 0.89
PRKAR1A-220ENST00000592194 SPHKAPQ2M3C7 1700 aa20.6■□□□□ 0.89
PRKAR1A-220ENST00000592194 AMOTL2Q9Y2J4 779 aa20.58■□□□□ 0.89
PRKAR1A-220ENST00000592194 NAIPQ13075 1403 aa20.58■□□□□ 0.88
PRKAR1A-220ENST00000592194 PTPRUQ92729 1446 aa20.58■□□□□ 0.88
PRKAR1A-220ENST00000592194 DIP2AQ14689 1571 aa20.58■□□□□ 0.88
PRKAR1A-220ENST00000592194 C19orf44Q9H6X5 657 aa20.55■□□□□ 0.88
PRKAR1A-220ENST00000592194 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.54■□□□□ 0.88
PRKAR1A-220ENST00000592194 NRXN3Q9Y4C0 1643 aa20.53■□□□□ 0.88
PRKAR1A-220ENST00000592194 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
PRKAR1A-220ENST00000592194 TRPM2O94759 1503 aa20.53■□□□□ 0.88
PRKAR1A-220ENST00000592194 PHLPP1O60346 1717 aa20.51■□□□□ 0.87
PRKAR1A-220ENST00000592194 C14orf37Q86TY3 774 aa20.51■□□□□ 0.87
PRKAR1A-220ENST00000592194 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
PRKAR1A-220ENST00000592194 SETBP1Q9Y6X0 1596 aa20.51■□□□□ 0.87
PRKAR1A-220ENST00000592194 CLTCL1P53675 1640 aa20.5■□□□□ 0.87
PRKAR1A-220ENST00000592194 ATF3P18847 181 aa20.49■□□□□ 0.87
PRKAR1A-220ENST00000592194 KIF1BO60333 1816 aa20.48■□□□□ 0.87
PRKAR1A-220ENST00000592194 METP08581 1390 aa20.48■□□□□ 0.87
PRKAR1A-220ENST00000592194 POTEAQ6S8J7 498 aa20.48■□□□□ 0.87
PRKAR1A-220ENST00000592194 TRIM52Q96A61 297 aa20.47■□□□□ 0.87
PRKAR1A-220ENST00000592194 NEXMIFQ5QGS0 1516 aa20.47■□□□□ 0.87
PRKAR1A-220ENST00000592194 XRN1Q8IZH2 1706 aaKnown RBP20.47■□□□□ 0.87
PRKAR1A-220ENST00000592194 JCADQ9P266 1359 aa20.46■□□□□ 0.87
PRKAR1A-220ENST00000592194 HFM1A2PYH4 1435 aa20.46■□□□□ 0.87
PRKAR1A-220ENST00000592194 COL16A1Q07092 1604 aaPredicted RBP20.45■□□□□ 0.87
PRKAR1A-220ENST00000592194 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
PRKAR1A-220ENST00000592194 BRINP3Q76B58 766 aa20.42■□□□□ 0.86
PRKAR1A-220ENST00000592194 AHDC1Q5TGY3 1603 aaPredicted RBP20.42■□□□□ 0.86
PRKAR1A-220ENST00000592194 VGFO15240 615 aaPredicted RBP20.4■□□□□ 0.86
PRKAR1A-220ENST00000592194 DCCP43146 1447 aa20.4■□□□□ 0.86
PRKAR1A-220ENST00000592194 RPGRIP1LQ68CZ1 1315 aa20.38■□□□□ 0.85
PRKAR1A-220ENST00000592194 MST1RQ04912 1400 aa20.37■□□□□ 0.85
PRKAR1A-220ENST00000592194 SPATA31A6Q5VVP1 1343 aa20.37■□□□□ 0.85
PRKAR1A-220ENST00000592194 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
PRKAR1A-220ENST00000592194 LRP6O75581 1613 aa20.35■□□□□ 0.85
PRKAR1A-220ENST00000592194 SHPRHQ149N8 1683 aa20.34■□□□□ 0.85
PRKAR1A-220ENST00000592194 ADGRL3Q9HAR2 1447 aa20.34■□□□□ 0.85
PRKAR1A-220ENST00000592194 PPLO60437 1756 aa20.33■□□□□ 0.84
PRKAR1A-220ENST00000592194 NALCNQ8IZF0 1738 aa20.32■□□□□ 0.84
PRKAR1A-220ENST00000592194 ASXL1Q8IXJ9 1541 aa20.32■□□□□ 0.84
PRKAR1A-220ENST00000592194 MPHOSPH9Q99550 1183 aa20.31■□□□□ 0.84
PRKAR1A-220ENST00000592194 ROBO2Q9HCK4 1378 aa20.31■□□□□ 0.84
PRKAR1A-220ENST00000592194 NHSL1Q5SYE7 1610 aa20.31■□□□□ 0.84
PRKAR1A-220ENST00000592194 SETD5Q9C0A6 1442 aa20.3■□□□□ 0.84
PRKAR1A-220ENST00000592194 DDX17Q92841 729 aaKnown RBP20.29■□□□□ 0.84
PRKAR1A-220ENST00000592194 LRRC59Q96AG4 307 aaKnown RBP20.28■□□□□ 0.84
PRKAR1A-220ENST00000592194 PTCH1Q13635 1447 aa20.27■□□□□ 0.84
PRKAR1A-220ENST00000592194 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
PRKAR1A-220ENST00000592194 ADGRF5Q8IZF2 1346 aa20.27■□□□□ 0.83
PRKAR1A-220ENST00000592194 C1orf167Q5SNV9 1468 aa20.26■□□□□ 0.83
PRKAR1A-220ENST00000592194 NUTM2BA6NNL0 878 aaPredicted RBP20.26■□□□□ 0.83
PRKAR1A-220ENST00000592194 NUTM2EB1AL46 878 aaPredicted RBP20.26■□□□□ 0.83
PRKAR1A-220ENST00000592194 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
PRKAR1A-220ENST00000592194 MEX3CQ5U5Q3 659 aaKnown RBP20.26■□□□□ 0.83
PRKAR1A-220ENST00000592194 ZNF772Q68DY9 489 aaPredicted RBP20.26■□□□□ 0.83
PRKAR1A-220ENST00000592194 NUTM2AQ8IVF1 878 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms