RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-216ENST00000591474 GCC2Q8IWJ2 1684 aa34.87■■■■□ 3.17
CXXC1-216ENST00000591474 ZFYVE9O95405 1425 aa34.87■■■■□ 3.17
CXXC1-216ENST00000591474 MYO5BQ9ULV0 1848 aa34.85■■■■□ 3.17
CXXC1-216ENST00000591474 PROSER2Q86WR7 435 aaPredicted RBP34.84■■■■□ 3.17
CXXC1-216ENST00000591474 TMEM131LA2VDJ0 1609 aa34.82■■■■□ 3.16
CXXC1-216ENST00000591474 PLEKHG1Q9ULL1 1385 aa34.81■■■■□ 3.16
CXXC1-216ENST00000591474 ROBO1Q9Y6N7 1651 aa34.8■■■■□ 3.16
CXXC1-216ENST00000591474 RIMS2Q9UQ26 1411 aa34.79■■■■□ 3.16
CXXC1-216ENST00000591474 ROCK1Q13464 1354 aa34.77■■■■□ 3.16
CXXC1-216ENST00000591474 CHD2O14647 1828 aaKnown RBP34.77■■■■□ 3.16
CXXC1-216ENST00000591474 BCANQ96GW7 911 aa34.77■■■■□ 3.16
CXXC1-216ENST00000591474 RBM33Q96EV2 1170 aaKnown RBP34.76■■■■□ 3.16
CXXC1-216ENST00000591474 E9PCH4 1651 aa34.76■■■■□ 3.15
CXXC1-216ENST00000591474 HDGFP51858 240 aaKnown RBP34.75■■■■□ 3.15
CXXC1-216ENST00000591474 MSH6P52701 1360 aa34.74■■■■□ 3.15
CXXC1-216ENST00000591474 IQGAP3Q86VI3 1631 aa34.73■■■■□ 3.15
CXXC1-216ENST00000591474 PPP1R15AO75807 674 aaPredicted RBP34.72■■■■□ 3.15
CXXC1-216ENST00000591474 RGS17Q9UGC6 210 aaPredicted RBP34.71■■■■□ 3.15
CXXC1-216ENST00000591474 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.68■■■■□ 3.14
CXXC1-216ENST00000591474 TBX22Q9Y458 520 aa34.66■■■■□ 3.14
CXXC1-216ENST00000591474 DIP2AQ14689 1571 aa34.64■■■■□ 3.14
CXXC1-216ENST00000591474 NCOA3Q9Y6Q9 1424 aa34.64■■■■□ 3.14
CXXC1-216ENST00000591474 ADAMTS13Q76LX8 1427 aa34.63■■■■□ 3.13
CXXC1-216ENST00000591474 CHGAP10645 457 aaKnown RBP34.62■■■■□ 3.13
CXXC1-216ENST00000591474 SLAIN2Q9P270 581 aa34.62■■■■□ 3.13
CXXC1-216ENST00000591474 PHLPP1O60346 1717 aa34.59■■■■□ 3.13
CXXC1-216ENST00000591474 NUP155O75694 1391 aa34.59■■■■□ 3.13
CXXC1-216ENST00000591474 PIK3R4Q99570 1358 aa34.58■■■■□ 3.13
CXXC1-216ENST00000591474 NUTM2DQ5VT03 806 aaPredicted RBP34.54■■■■□ 3.12
CXXC1-216ENST00000591474 JCADQ9P266 1359 aa34.51■■■■□ 3.12
CXXC1-216ENST00000591474 TRPM2O94759 1503 aa34.5■■■■□ 3.11
CXXC1-216ENST00000591474 COL16A1Q07092 1604 aaPredicted RBP34.5■■■■□ 3.11
CXXC1-216ENST00000591474 ITGAEP38570 1179 aa34.49■■■■□ 3.11
CXXC1-216ENST00000591474 POTEAQ6S8J7 498 aa34.49■■■■□ 3.11
CXXC1-216ENST00000591474 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.49■■■■□ 3.11
CXXC1-216ENST00000591474 SPHKAPQ2M3C7 1700 aa34.47■■■■□ 3.11
CXXC1-216ENST00000591474 C14orf37Q86TY3 774 aa34.45■■■■□ 3.11
CXXC1-216ENST00000591474 CADPS2Q86UW7 1296 aa34.45■■■■□ 3.11
CXXC1-216ENST00000591474 C19orf44Q9H6X5 657 aa34.45■■■■□ 3.11
CXXC1-216ENST00000591474 PTPRUQ92729 1446 aa34.43■■■■□ 3.1
CXXC1-216ENST00000591474 AHDC1Q5TGY3 1603 aaPredicted RBP34.42■■■■□ 3.1
CXXC1-216ENST00000591474 NRXN3Q9Y4C0 1643 aa34.42■■■■□ 3.1
CXXC1-216ENST00000591474 SETBP1Q9Y6X0 1596 aa34.41■■■■□ 3.1
CXXC1-216ENST00000591474 AMOTL2Q9Y2J4 779 aa34.4■■■■□ 3.1
CXXC1-216ENST00000591474 ATF3P18847 181 aa34.39■■■■□ 3.1
CXXC1-216ENST00000591474 XRN1Q8IZH2 1706 aaKnown RBP34.38■■■■□ 3.09
CXXC1-216ENST00000591474 DCCP43146 1447 aa34.36■■■■□ 3.09
CXXC1-216ENST00000591474 PPARGC1BQ86YN6 1023 aaKnown RBP34.35■■■■□ 3.09
CXXC1-216ENST00000591474 SPATA31A6Q5VVP1 1343 aa34.34■■■■□ 3.09
CXXC1-216ENST00000591474 SHPRHQ149N8 1683 aa34.33■■■■□ 3.09
CXXC1-216ENST00000591474 LRP6O75581 1613 aa34.32■■■■□ 3.08
CXXC1-216ENST00000591474 CLTCL1P53675 1640 aa34.3■■■■□ 3.08
CXXC1-216ENST00000591474 ZNF326Q5BKZ1 582 aaKnown RBP34.29■■■■□ 3.08
CXXC1-216ENST00000591474 RRBP1Q9P2E9 1410 aaKnown RBP34.29■■■■□ 3.08
CXXC1-216ENST00000591474 NEXMIFQ5QGS0 1516 aa34.27■■■■□ 3.08
CXXC1-216ENST00000591474 BRINP3Q76B58 766 aa34.27■■■■□ 3.08
CXXC1-216ENST00000591474 METP08581 1390 aa34.25■■■■□ 3.07
CXXC1-216ENST00000591474 SETD1AO15047 1707 aaKnown RBP34.24■■■■□ 3.07
CXXC1-216ENST00000591474 NAIPQ13075 1403 aa34.23■■■■□ 3.07
CXXC1-216ENST00000591474 ASXL1Q8IXJ9 1541 aa34.23■■■■□ 3.07
CXXC1-216ENST00000591474 MST1RQ04912 1400 aa34.21■■■■□ 3.07
CXXC1-216ENST00000591474 KIF1BO60333 1816 aa34.21■■■■□ 3.07
CXXC1-216ENST00000591474 MEX3CQ5U5Q3 659 aaKnown RBP34.2■■■■□ 3.07
CXXC1-216ENST00000591474 NHSL1Q5SYE7 1610 aa34.19■■■■□ 3.06
CXXC1-216ENST00000591474 ZNF772Q68DY9 489 aaPredicted RBP34.17■■■■□ 3.06
CXXC1-216ENST00000591474 ADGRL3Q9HAR2 1447 aa34.17■■■■□ 3.06
CXXC1-216ENST00000591474 SETD5Q9C0A6 1442 aa34.15■■■■□ 3.06
CXXC1-216ENST00000591474 NALCNQ8IZF0 1738 aa34.14■■■■□ 3.06
CXXC1-216ENST00000591474 HFM1A2PYH4 1435 aa34.09■■■■□ 3.05
CXXC1-216ENST00000591474 PTCH1Q13635 1447 aa34.07■■■■□ 3.04
CXXC1-216ENST00000591474 NUTM2BA6NNL0 878 aaPredicted RBP34.04■■■■□ 3.04
CXXC1-216ENST00000591474 NUTM2EB1AL46 878 aaPredicted RBP34.04■■■■□ 3.04
CXXC1-216ENST00000591474 VGFO15240 615 aaPredicted RBP34.04■■■■□ 3.04
CXXC1-216ENST00000591474 NUTM2AQ8IVF1 878 aaPredicted RBP34.04■■■■□ 3.04
CXXC1-216ENST00000591474 LRRC59Q96AG4 307 aaKnown RBP34.04■■■■□ 3.04
CXXC1-216ENST00000591474 PRAG1Q86YV5 1406 aa34.03■■■■□ 3.04
CXXC1-216ENST00000591474 TRIM52Q96A61 297 aa34.01■■■■□ 3.03
CXXC1-216ENST00000591474 RPGRIP1LQ68CZ1 1315 aa34.01■■■■□ 3.03
CXXC1-216ENST00000591474 C1orf167Q5SNV9 1468 aa34■■■■□ 3.03
CXXC1-216ENST00000591474 LAMC1P11047 1609 aa33.99■■■■□ 3.03
CXXC1-216ENST00000591474 PNPLA6Q8IY17 1366 aa33.98■■■■□ 3.03
CXXC1-216ENST00000591474 PPLO60437 1756 aa33.98■■■■□ 3.03
CXXC1-216ENST00000591474 DDX17Q92841 729 aaKnown RBP33.98■■■■□ 3.03
CXXC1-216ENST00000591474 CDK12Q9NYV4 1490 aaPredicted RBP33.98■■■■□ 3.03
CXXC1-216ENST00000591474 ROBO2Q9HCK4 1378 aa33.98■■■■□ 3.03
CXXC1-216ENST00000591474 RXRBP28702 533 aa33.97■■■■□ 3.03
CXXC1-216ENST00000591474 SLC4A1APQ9BWU0 796 aaKnown RBP33.97■■■■□ 3.03
CXXC1-216ENST00000591474 AFF2P51816 1311 aa33.96■■■■□ 3.03
CXXC1-216ENST00000591474 UPF1Q92900 1129 aaKnown RBP eCLIP33.92■■■■□ 3.02
CXXC1-216ENST00000591474 C8orf37Q96NL8 207 aa33.87■■■■□ 3.01
CXXC1-216ENST00000591474 SOS2Q07890 1332 aaPredicted RBP33.86■■■■□ 3.01
CXXC1-216ENST00000591474 ORAI2Q96SN7 254 aa33.85■■■■□ 3.01
CXXC1-216ENST00000591474 CDC42BPGQ6DT37 1551 aa33.81■■■■□ 3
CXXC1-216ENST00000591474 CCDC144AA2RUR9 1427 aa33.79■■■■□ 3
CXXC1-216ENST00000591474 FOXD1Q16676 465 aa33.79■■■■□ 3
CXXC1-216ENST00000591474 QTRT2Q9H974 415 aaKnown RBP33.79■■■■□ 3
CXXC1-216ENST00000591474 RGS12O14924 1447 aa33.79■■■■□ 3
CXXC1-216ENST00000591474 RBM6P78332 1123 aaKnown RBP33.78■■■■□ 3
CXXC1-216ENST00000591474 IFT172Q9UG01 1749 aa33.76■■■■□ 3
CXXC1-216ENST00000591474 COL22A1Q8NFW1 1626 aaPredicted RBP33.76■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms