RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 ZFYVE16Q7Z3T8 1539 aa25.25■■□□□ 1.63
MBD3-207ENST00000590550 WDR43Q15061 677 aaKnown RBP eCLIP25.24■■□□□ 1.63
MBD3-207ENST00000590550 CLTCL1P53675 1640 aa25.23■■□□□ 1.63
MBD3-207ENST00000590550 PLEKHH1Q9ULM0 1364 aa25.23■■□□□ 1.63
MBD3-207ENST00000590550 CFAP70Q5T0N1 1121 aa25.22■■□□□ 1.63
MBD3-207ENST00000590550 CCDC146Q8IYE0 955 aa25.22■■□□□ 1.63
MBD3-207ENST00000590550 TRPM2O94759 1503 aa25.21■■□□□ 1.63
MBD3-207ENST00000590550 SCAPERQ9BY12 1400 aa25.21■■□□□ 1.63
MBD3-207ENST00000590550 UHRF1BP1LA0JNW5 1464 aa25.21■■□□□ 1.63
MBD3-207ENST00000590550 SCAF11Q99590 1463 aaKnown RBP25.2■■□□□ 1.63
MBD3-207ENST00000590550 UGGT1Q9NYU2 1555 aa25.2■■□□□ 1.63
MBD3-207ENST00000590550 USP35Q9P2H5 1018 aa25.2■■□□□ 1.62
MBD3-207ENST00000590550 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
MBD3-207ENST00000590550 IQGAP1P46940 1657 aa25.19■■□□□ 1.62
MBD3-207ENST00000590550 ZMYM4Q5VZL5 1548 aa25.18■■□□□ 1.62
MBD3-207ENST00000590550 PTPRTO14522 1441 aa25.18■■□□□ 1.62
MBD3-207ENST00000590550 PDE4AP27815 886 aa25.18■■□□□ 1.62
MBD3-207ENST00000590550 SPHKAPQ2M3C7 1700 aa25.17■■□□□ 1.62
MBD3-207ENST00000590550 ADGRF5Q8IZF2 1346 aa25.17■■□□□ 1.62
MBD3-207ENST00000590550 FANCAO15360 1455 aa25.17■■□□□ 1.62
MBD3-207ENST00000590550 RTEL1-TNFRSF6BF6WH68 1400 aa25.17■■□□□ 1.62
MBD3-207ENST00000590550 TCERG1O14776 1098 aaKnown RBP25.16■■□□□ 1.62
MBD3-207ENST00000590550 CDCA8Q53HL2 280 aa25.15■■□□□ 1.62
MBD3-207ENST00000590550 KANK1Q14678 1352 aa25.15■■□□□ 1.62
MBD3-207ENST00000590550 DUSP27Q5VZP5 1158 aa25.14■■□□□ 1.62
MBD3-207ENST00000590550 CEP152O94986 1710 aa25.14■■□□□ 1.62
MBD3-207ENST00000590550 ATP7AQ04656 1500 aa25.13■■□□□ 1.61
MBD3-207ENST00000590550 INSRP06213 1382 aa25.12■■□□□ 1.61
MBD3-207ENST00000590550 CHGAP10645 457 aaKnown RBP25.11■■□□□ 1.61
MBD3-207ENST00000590550 PPM1GO15355 546 aaPredicted RBP25.11■■□□□ 1.61
MBD3-207ENST00000590550 ASXL1Q8IXJ9 1541 aa25.1■■□□□ 1.61
MBD3-207ENST00000590550 GSE1Q14687 1217 aa25.1■■□□□ 1.61
MBD3-207ENST00000590550 ADGRL1O94910 1474 aa25.1■■□□□ 1.61
MBD3-207ENST00000590550 BACH2Q9BYV9 841 aa25.1■■□□□ 1.61
MBD3-207ENST00000590550 SPINK5Q9NQ38 1064 aaPredicted RBP25.1■■□□□ 1.61
MBD3-207ENST00000590550 GOLGA2Q08379 1002 aa25.09■■□□□ 1.61
MBD3-207ENST00000590550 SYNMO15061 1565 aa25.09■■□□□ 1.61
MBD3-207ENST00000590550 TET3O43151 1660 aa25.09■■□□□ 1.61
MBD3-207ENST00000590550 APAF1O14727 1248 aa25.08■■□□□ 1.61
MBD3-207ENST00000590550 CARD14Q9BXL6 1004 aa25.08■■□□□ 1.61
MBD3-207ENST00000590550 DEPDC5O75140 1603 aa25.08■■□□□ 1.61
MBD3-207ENST00000590550 EIF3AQ14152 1382 aaKnown RBP25.07■■□□□ 1.6
MBD3-207ENST00000590550 MYOM1P52179 1685 aa25.07■■□□□ 1.6
MBD3-207ENST00000590550 ZNF521Q96K83 1311 aa25.07■■□□□ 1.6
MBD3-207ENST00000590550 INO80Q9ULG1 1556 aaPredicted RBP25.05■■□□□ 1.6
MBD3-207ENST00000590550 PKNOX2Q96KN3 472 aa25.05■■□□□ 1.6
MBD3-207ENST00000590550 TNNT2P45379 298 aaPredicted RBP25.03■■□□□ 1.6
MBD3-207ENST00000590550 STAC3Q96MF2 364 aa25.03■■□□□ 1.6
MBD3-207ENST00000590550 FRAT1Q92837 279 aaPredicted RBP25.03■■□□□ 1.6
MBD3-207ENST00000590550 DMRT2Q9Y5R5 561 aa25.03■■□□□ 1.6
MBD3-207ENST00000590550 ARAP3Q8WWN8 1544 aa25.03■■□□□ 1.6
MBD3-207ENST00000590550 ERVK-7P63135 1459 aa25.02■■□□□ 1.6
MBD3-207ENST00000590550 VWDEQ8N2E2 1590 aa25.01■■□□□ 1.59
MBD3-207ENST00000590550 SLFN5Q08AF3 891 aa25.01■■□□□ 1.59
MBD3-207ENST00000590550 MS4A1P11836 297 aa25.01■■□□□ 1.59
MBD3-207ENST00000590550 ABCA9Q8IUA7 1624 aa25.01■■□□□ 1.59
MBD3-207ENST00000590550 PIK3C2GO75747 1445 aa25.01■■□□□ 1.59
MBD3-207ENST00000590550 MROH1Q8NDA8 1641 aa25■■□□□ 1.59
MBD3-207ENST00000590550 TRAK1Q9UPV9 953 aa25■■□□□ 1.59
MBD3-207ENST00000590550 ABCA6Q8N139 1617 aa25■■□□□ 1.59
MBD3-207ENST00000590550 SENP3Q9H4L4 574 aaPredicted RBP24.99■■□□□ 1.59
MBD3-207ENST00000590550 GGT6Q6P531 493 aa24.99■■□□□ 1.59
MBD3-207ENST00000590550 KDM5AP29375 1690 aaKnown RBP24.99■■□□□ 1.59
MBD3-207ENST00000590550 CFAP65Q6ZU64 1925 aaKnown RBP24.98■■□□□ 1.59
MBD3-207ENST00000590550 BCAR3O75815 825 aa24.98■■□□□ 1.59
MBD3-207ENST00000590550 ASXL2Q76L83 1435 aa24.98■■□□□ 1.59
MBD3-207ENST00000590550 TMEM132EQ6IEE7 984 aa24.97■■□□□ 1.59
MBD3-207ENST00000590550 MAP3K4Q9Y6R4 1608 aa24.97■■□□□ 1.59
MBD3-207ENST00000590550 NUTM2DQ5VT03 806 aaPredicted RBP24.97■■□□□ 1.59
MBD3-207ENST00000590550 SLC4A3P48751 1232 aa24.96■■□□□ 1.59
MBD3-207ENST00000590550 NFKBIBQ15653 356 aa24.96■■□□□ 1.59
MBD3-207ENST00000590550 KDM2BQ8NHM5 1336 aa24.96■■□□□ 1.59
MBD3-207ENST00000590550 NOS1P29475 1434 aa24.96■■□□□ 1.59
MBD3-207ENST00000590550 MROH2AA6NES4 1674 aa24.94■■□□□ 1.58
MBD3-207ENST00000590550 NPC1L1Q9UHC9 1359 aa24.94■■□□□ 1.58
MBD3-207ENST00000590550 NEUROD2Q15784 382 aa24.93■■□□□ 1.58
MBD3-207ENST00000590550 SLC12A5Q9H2X9 1139 aa24.93■■□□□ 1.58
MBD3-207ENST00000590550 RSPH6AQ9H0K4 717 aa24.92■■□□□ 1.58
MBD3-207ENST00000590550 EFCAB6Q5THR3 1501 aa24.92■■□□□ 1.58
MBD3-207ENST00000590550 PPRC1Q5VV67 1664 aaKnown RBP24.92■■□□□ 1.58
MBD3-207ENST00000590550 MYOM2P54296 1465 aa24.91■■□□□ 1.58
MBD3-207ENST00000590550 CENPJQ9HC77 1338 aaPredicted RBP24.91■■□□□ 1.58
MBD3-207ENST00000590550 RGS3P49796 1198 aa24.9■■□□□ 1.58
MBD3-207ENST00000590550 RRP7AQ9Y3A4 280 aaKnown RBP24.9■■□□□ 1.58
MBD3-207ENST00000590550 KIF1BO60333 1816 aa24.9■■□□□ 1.58
MBD3-207ENST00000590550 TRMT2AQ8IZ69 625 aaKnown RBP24.9■■□□□ 1.58
MBD3-207ENST00000590550 KIDINS220Q9ULH0 1771 aa24.9■■□□□ 1.58
MBD3-207ENST00000590550 KIAA1210Q9ULL0 1709 aa24.9■■□□□ 1.58
MBD3-207ENST00000590550 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.89■■□□□ 1.58
MBD3-207ENST00000590550 CENPQQ7L2Z9 268 aaPredicted RBP24.89■■□□□ 1.57
MBD3-207ENST00000590550 NSD3Q9BZ95 1437 aa24.86■■□□□ 1.57
MBD3-207ENST00000590550 MORC1Q86VD1 984 aa24.86■■□□□ 1.57
MBD3-207ENST00000590550 NKTRP30414 1462 aaKnown RBP24.86■■□□□ 1.57
MBD3-207ENST00000590550 E9PSI1 815 aa24.84■■□□□ 1.57
MBD3-207ENST00000590550 NPATQ14207 1427 aa24.84■■□□□ 1.57
MBD3-207ENST00000590550 SAFB2Q14151 953 aaKnown RBP eCLIP24.82■■□□□ 1.56
MBD3-207ENST00000590550 WWC1Q8IX03 1113 aa24.82■■□□□ 1.56
MBD3-207ENST00000590550 IFT172Q9UG01 1749 aa24.82■■□□□ 1.56
MBD3-207ENST00000590550 DDRGK1Q96HY6 314 aa24.82■■□□□ 1.56
MBD3-207ENST00000590550 ZNF518AQ6AHZ1 1483 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms