RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 SCAF1Q9H7N4 1312 aaKnown RBP23.27■■□□□ 1.32
GCDH-208ENST00000588905 E9PCH4 1651 aa23.25■■□□□ 1.31
GCDH-208ENST00000588905 SOCS7O14512 581 aa23.25■■□□□ 1.31
GCDH-208ENST00000588905 NWD1Q149M9 1564 aa23.23■■□□□ 1.31
GCDH-208ENST00000588905 TMEM131LA2VDJ0 1609 aa23.22■■□□□ 1.31
GCDH-208ENST00000588905 TRIM52Q96A61 297 aa23.21■■□□□ 1.31
GCDH-208ENST00000588905 CHGAP10645 457 aaKnown RBP23.19■■□□□ 1.3
GCDH-208ENST00000588905 ZFYVE9O95405 1425 aa23.18■■□□□ 1.3
GCDH-208ENST00000588905 HDGFP51858 240 aaKnown RBP23.17■■□□□ 1.3
GCDH-208ENST00000588905 CHD2O14647 1828 aaKnown RBP23.17■■□□□ 1.3
GCDH-208ENST00000588905 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.12■■□□□ 1.29
GCDH-208ENST00000588905 SLC4A1APQ9BWU0 796 aaKnown RBP23.12■■□□□ 1.29
GCDH-208ENST00000588905 RIMS2Q9UQ26 1411 aa23.12■■□□□ 1.29
GCDH-208ENST00000588905 PPP1R15AO75807 674 aaPredicted RBP23.1■■□□□ 1.29
GCDH-208ENST00000588905 BCANQ96GW7 911 aa23.1■■□□□ 1.29
GCDH-208ENST00000588905 SLC26A8Q96RN1 970 aa23.1■■□□□ 1.29
GCDH-208ENST00000588905 TMEM94Q12767 1356 aa23.1■■□□□ 1.29
GCDH-208ENST00000588905 NKTRP30414 1462 aaKnown RBP23.1■■□□□ 1.29
GCDH-208ENST00000588905 ROBO1Q9Y6N7 1651 aa23.09■■□□□ 1.29
GCDH-208ENST00000588905 SETD5Q9C0A6 1442 aa23.08■■□□□ 1.28
GCDH-208ENST00000588905 PLEKHG1Q9ULL1 1385 aa23.07■■□□□ 1.28
GCDH-208ENST00000588905 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
GCDH-208ENST00000588905 KCNA6P17658 529 aa23.06■■□□□ 1.28
GCDH-208ENST00000588905 ACIN1Q9UKV3 1341 aaKnown RBP23.06■■□□□ 1.28
GCDH-208ENST00000588905 SPHKAPQ2M3C7 1700 aa23.05■■□□□ 1.28
GCDH-208ENST00000588905 NUTM2DQ5VT03 806 aaPredicted RBP23.04■■□□□ 1.28
GCDH-208ENST00000588905 RBM33Q96EV2 1170 aaKnown RBP23.04■■□□□ 1.28
GCDH-208ENST00000588905 FAM135BQ49AJ0 1406 aa23.02■■□□□ 1.28
GCDH-208ENST00000588905 ADAMTS13Q76LX8 1427 aa23.02■■□□□ 1.28
GCDH-208ENST00000588905 ZNF326Q5BKZ1 582 aaKnown RBP23.02■■□□□ 1.28
GCDH-208ENST00000588905 TRPM2O94759 1503 aa23.02■■□□□ 1.28
GCDH-208ENST00000588905 NRXN3Q9Y4C0 1643 aa23.01■■□□□ 1.27
GCDH-208ENST00000588905 MPHOSPH9Q99550 1183 aa23.01■■□□□ 1.27
GCDH-208ENST00000588905 TBX22Q9Y458 520 aa23.01■■□□□ 1.27
GCDH-208ENST00000588905 RAB3GAP2Q9H2M9 1393 aa23■■□□□ 1.27
GCDH-208ENST00000588905 DIP2AQ14689 1571 aa22.99■■□□□ 1.27
GCDH-208ENST00000588905 FOXD1Q16676 465 aa22.98■■□□□ 1.27
GCDH-208ENST00000588905 PROSER2Q86WR7 435 aaPredicted RBP22.97■■□□□ 1.27
GCDH-208ENST00000588905 CLTCL1P53675 1640 aa22.96■■□□□ 1.27
GCDH-208ENST00000588905 PHLPP1O60346 1717 aa22.95■■□□□ 1.26
GCDH-208ENST00000588905 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.95■■□□□ 1.26
GCDH-208ENST00000588905 HRCP23327 699 aa22.94■■□□□ 1.26
GCDH-208ENST00000588905 XRN1Q8IZH2 1706 aaKnown RBP22.94■■□□□ 1.26
GCDH-208ENST00000588905 COL16A1Q07092 1604 aaPredicted RBP22.92■■□□□ 1.26
GCDH-208ENST00000588905 RGS17Q9UGC6 210 aaPredicted RBP22.91■■□□□ 1.26
GCDH-208ENST00000588905 PTPRUQ92729 1446 aa22.91■■□□□ 1.26
GCDH-208ENST00000588905 SETBP1Q9Y6X0 1596 aa22.9■■□□□ 1.26
GCDH-208ENST00000588905 MSH6P52701 1360 aa22.89■■□□□ 1.26
GCDH-208ENST00000588905 PIK3R4Q99570 1358 aa22.89■■□□□ 1.26
GCDH-208ENST00000588905 RPGRIP1LQ68CZ1 1315 aa22.89■■□□□ 1.26
GCDH-208ENST00000588905 VGFO15240 615 aaPredicted RBP22.88■■□□□ 1.25
GCDH-208ENST00000588905 CCDC144AA2RUR9 1427 aa22.88■■□□□ 1.25
GCDH-208ENST00000588905 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
GCDH-208ENST00000588905 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
GCDH-208ENST00000588905 KIF1BO60333 1816 aa22.85■■□□□ 1.25
GCDH-208ENST00000588905 SETD1AO15047 1707 aaKnown RBP22.85■■□□□ 1.25
GCDH-208ENST00000588905 NCOA3Q9Y6Q9 1424 aa22.84■■□□□ 1.25
GCDH-208ENST00000588905 AMOTL2Q9Y2J4 779 aa22.84■■□□□ 1.25
GCDH-208ENST00000588905 AHDC1Q5TGY3 1603 aaPredicted RBP22.82■■□□□ 1.24
GCDH-208ENST00000588905 RGL3Q3MIN7 710 aa22.81■■□□□ 1.24
GCDH-208ENST00000588905 SLAIN2Q9P270 581 aa22.81■■□□□ 1.24
GCDH-208ENST00000588905 NALCNQ8IZF0 1738 aa22.8■■□□□ 1.24
GCDH-208ENST00000588905 METP08581 1390 aa22.78■■□□□ 1.24
GCDH-208ENST00000588905 SHPRHQ149N8 1683 aa22.78■■□□□ 1.24
GCDH-208ENST00000588905 SPATA31E1Q6ZUB1 1445 aa22.78■■□□□ 1.24
GCDH-208ENST00000588905 LRP6O75581 1613 aa22.76■■□□□ 1.23
GCDH-208ENST00000588905 C14orf37Q86TY3 774 aa22.76■■□□□ 1.23
GCDH-208ENST00000588905 PPLO60437 1756 aa22.75■■□□□ 1.23
GCDH-208ENST00000588905 NHSL1Q5SYE7 1610 aa22.75■■□□□ 1.23
GCDH-208ENST00000588905 POTEAQ6S8J7 498 aa22.74■■□□□ 1.23
GCDH-208ENST00000588905 C19orf44Q9H6X5 657 aa22.74■■□□□ 1.23
GCDH-208ENST00000588905 ANKRD30BQ9BXX2 1392 aa22.74■■□□□ 1.23
GCDH-208ENST00000588905 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
GCDH-208ENST00000588905 ADGRF5Q8IZF2 1346 aa22.72■■□□□ 1.23
GCDH-208ENST00000588905 JCADQ9P266 1359 aa22.72■■□□□ 1.23
GCDH-208ENST00000588905 DCCP43146 1447 aa22.72■■□□□ 1.23
GCDH-208ENST00000588905 MST1RQ04912 1400 aa22.7■■□□□ 1.22
GCDH-208ENST00000588905 ASXL1Q8IXJ9 1541 aa22.7■■□□□ 1.22
GCDH-208ENST00000588905 CADPS2Q86UW7 1296 aa22.69■■□□□ 1.22
GCDH-208ENST00000588905 ATF3P18847 181 aa22.68■■□□□ 1.22
GCDH-208ENST00000588905 IFT172Q9UG01 1749 aa22.66■■□□□ 1.22
GCDH-208ENST00000588905 ADGRL3Q9HAR2 1447 aa22.65■■□□□ 1.22
GCDH-208ENST00000588905 BRINP3Q76B58 766 aa22.65■■□□□ 1.22
GCDH-208ENST00000588905 LAMC1P11047 1609 aa22.62■■□□□ 1.21
GCDH-208ENST00000588905 PRAG1Q86YV5 1406 aa22.62■■□□□ 1.21
GCDH-208ENST00000588905 PTCH1Q13635 1447 aa22.61■■□□□ 1.21
GCDH-208ENST00000588905 ROBO2Q9HCK4 1378 aa22.61■■□□□ 1.21
GCDH-208ENST00000588905 PIK3C2GO75747 1445 aa22.6■■□□□ 1.21
GCDH-208ENST00000588905 SPATA31A6Q5VVP1 1343 aa22.58■■□□□ 1.21
GCDH-208ENST00000588905 C14orf93Q9H972 538 aaKnown RBP22.58■■□□□ 1.21
GCDH-208ENST00000588905 TMEM132EQ6IEE7 984 aa22.57■■□□□ 1.2
GCDH-208ENST00000588905 STK26Q9P289 416 aa22.57■■□□□ 1.2
GCDH-208ENST00000588905 MYOM2P54296 1465 aa22.56■■□□□ 1.2
GCDH-208ENST00000588905 NRXN1Q9ULB1 1477 aa22.55■■□□□ 1.2
GCDH-208ENST00000588905 LRPPRCP42704 1394 aaKnown RBP22.55■■□□□ 1.2
GCDH-208ENST00000588905 STAC3Q96MF2 364 aa22.55■■□□□ 1.2
GCDH-208ENST00000588905 ABCC11Q96J66 1382 aa22.54■■□□□ 1.2
GCDH-208ENST00000588905 CFAP70Q5T0N1 1121 aa22.54■■□□□ 1.2
GCDH-208ENST00000588905 DCAF11Q8TEB1 546 aa22.54■■□□□ 1.2
GCDH-208ENST00000588905 DDX17Q92841 729 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms