RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 RAPGEF3O95398 923 aa23.74■■□□□ 1.39
ERCC2-211ENST00000588652 ANP32EQ9BTT0 268 aa23.73■■□□□ 1.39
ERCC2-211ENST00000588652 WASHC2CQ9Y4E1 1318 aa23.73■■□□□ 1.39
ERCC2-211ENST00000588652 GGT6Q6P531 493 aa23.73■■□□□ 1.39
ERCC2-211ENST00000588652 NPATQ14207 1427 aa23.72■■□□□ 1.39
ERCC2-211ENST00000588652 PANK3Q9H999 370 aa23.72■■□□□ 1.39
ERCC2-211ENST00000588652 LRPPRCP42704 1394 aaKnown RBP23.71■■□□□ 1.39
ERCC2-211ENST00000588652 SMG6Q86US8 1419 aaKnown RBP23.71■■□□□ 1.39
ERCC2-211ENST00000588652 CFAP65Q6ZU64 1925 aaKnown RBP23.71■■□□□ 1.39
ERCC2-211ENST00000588652 RICTORQ6R327 1708 aa23.7■■□□□ 1.38
ERCC2-211ENST00000588652 ADGRB3O60242 1522 aa23.69■■□□□ 1.38
ERCC2-211ENST00000588652 ADGRF5Q8IZF2 1346 aa23.69■■□□□ 1.38
ERCC2-211ENST00000588652 NLRP13Q86W25 1043 aa23.69■■□□□ 1.38
ERCC2-211ENST00000588652 DIP2CQ9Y2E4 1556 aa23.69■■□□□ 1.38
ERCC2-211ENST00000588652 ABCC3O15438 1527 aa23.68■■□□□ 1.38
ERCC2-211ENST00000588652 CYB5RLQ6IPT4 315 aa23.68■■□□□ 1.38
ERCC2-211ENST00000588652 EIF3AQ14152 1382 aaKnown RBP23.67■■□□□ 1.38
ERCC2-211ENST00000588652 NRXN1Q9ULB1 1477 aa23.66■■□□□ 1.38
ERCC2-211ENST00000588652 CFAP70Q5T0N1 1121 aa23.66■■□□□ 1.38
ERCC2-211ENST00000588652 GLI2P10070 1586 aa23.65■■□□□ 1.38
ERCC2-211ENST00000588652 CDCA8Q53HL2 280 aa23.64■■□□□ 1.37
ERCC2-211ENST00000588652 CAMSAP1Q5T5Y3 1602 aa23.64■■□□□ 1.37
ERCC2-211ENST00000588652 CC2D1BQ5T0F9 858 aaKnown RBP23.63■■□□□ 1.37
ERCC2-211ENST00000588652 SYNMO15061 1565 aa23.62■■□□□ 1.37
ERCC2-211ENST00000588652 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
ERCC2-211ENST00000588652 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
ERCC2-211ENST00000588652 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
ERCC2-211ENST00000588652 NUDCQ9Y266 331 aa23.61■■□□□ 1.37
ERCC2-211ENST00000588652 NOS1P29475 1434 aa23.61■■□□□ 1.37
ERCC2-211ENST00000588652 PPLO60437 1756 aa23.6■■□□□ 1.37
ERCC2-211ENST00000588652 CHGAP10645 457 aaKnown RBP23.6■■□□□ 1.37
ERCC2-211ENST00000588652 SIGLEC1Q9BZZ2 1709 aa23.6■■□□□ 1.37
ERCC2-211ENST00000588652 MYOM1P52179 1685 aa23.58■■□□□ 1.37
ERCC2-211ENST00000588652 YEATS2Q9ULM3 1422 aa23.58■■□□□ 1.36
ERCC2-211ENST00000588652 B4GALNT3Q6L9W6 998 aa23.57■■□□□ 1.36
ERCC2-211ENST00000588652 KDM5AP29375 1690 aaKnown RBP23.57■■□□□ 1.36
ERCC2-211ENST00000588652 RNF123Q5XPI4 1314 aa23.56■■□□□ 1.36
ERCC2-211ENST00000588652 SETBP1Q9Y6X0 1596 aa23.56■■□□□ 1.36
ERCC2-211ENST00000588652 SENP3-EIF4A1A0A087X0R7 540 aa23.55■■□□□ 1.36
ERCC2-211ENST00000588652 ZC3H13Q5T200 1668 aaKnown RBP23.55■■□□□ 1.36
ERCC2-211ENST00000588652 PIK3C2BO00750 1634 aa23.55■■□□□ 1.36
ERCC2-211ENST00000588652 PIK3C2GO75747 1445 aa23.55■■□□□ 1.36
ERCC2-211ENST00000588652 KNSTRNQ9Y448 316 aa23.54■■□□□ 1.36
ERCC2-211ENST00000588652 MYO3AQ8NEV4 1616 aa23.54■■□□□ 1.36
ERCC2-211ENST00000588652 FANCIQ9NVI1 1328 aa23.53■■□□□ 1.36
ERCC2-211ENST00000588652 ARHGAP31Q2M1Z3 1444 aa23.53■■□□□ 1.36
ERCC2-211ENST00000588652 DIP2BQ9P265 1576 aa23.53■■□□□ 1.36
ERCC2-211ENST00000588652 ERVK-7P63135 1459 aa23.53■■□□□ 1.36
ERCC2-211ENST00000588652 RPGRIP1LQ68CZ1 1315 aa23.53■■□□□ 1.36
ERCC2-211ENST00000588652 AMER1Q5JTC6 1135 aaPredicted RBP23.51■■□□□ 1.35
ERCC2-211ENST00000588652 FAM69CQ0P6D2 419 aa23.51■■□□□ 1.35
ERCC2-211ENST00000588652 ZMYM4Q5VZL5 1548 aa23.5■■□□□ 1.35
ERCC2-211ENST00000588652 C14orf93Q9H972 538 aaKnown RBP23.5■■□□□ 1.35
ERCC2-211ENST00000588652 SBNO2Q9Y2G9 1366 aa23.49■■□□□ 1.35
ERCC2-211ENST00000588652 MSH5O43196 834 aa23.49■■□□□ 1.35
ERCC2-211ENST00000588652 ASXL1Q8IXJ9 1541 aa23.49■■□□□ 1.35
ERCC2-211ENST00000588652 INSRP06213 1382 aa23.48■■□□□ 1.35
ERCC2-211ENST00000588652 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
ERCC2-211ENST00000588652 NPC1L1Q9UHC9 1359 aa23.46■■□□□ 1.35
ERCC2-211ENST00000588652 TSPOAP1O95153 1857 aa23.45■■□□□ 1.35
ERCC2-211ENST00000588652 CENPJQ9HC77 1338 aaPredicted RBP23.45■■□□□ 1.34
ERCC2-211ENST00000588652 NEXMIFQ5QGS0 1516 aa23.44■■□□□ 1.34
ERCC2-211ENST00000588652 BLMP54132 1417 aaPredicted RBP23.44■■□□□ 1.34
ERCC2-211ENST00000588652 PPP2R1AP30153 589 aa23.43■■□□□ 1.34
ERCC2-211ENST00000588652 PLPPR3Q6T4P5 718 aa23.42■■□□□ 1.34
ERCC2-211ENST00000588652 TRAK1Q9UPV9 953 aa23.42■■□□□ 1.34
ERCC2-211ENST00000588652 IDI1Q13907 227 aa23.42■■□□□ 1.34
ERCC2-211ENST00000588652 PREX1Q8TCU6 1659 aa23.41■■□□□ 1.34
ERCC2-211ENST00000588652 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
ERCC2-211ENST00000588652 VGFO15240 615 aaPredicted RBP23.41■■□□□ 1.34
ERCC2-211ENST00000588652 TMEM132EQ6IEE7 984 aa23.4■■□□□ 1.34
ERCC2-211ENST00000588652 SLC52A1Q9NWF4 448 aa23.4■■□□□ 1.34
ERCC2-211ENST00000588652 SALL2Q9Y467 1007 aaPredicted RBP23.39■■□□□ 1.34
ERCC2-211ENST00000588652 PDE3BQ13370 1112 aa23.38■■□□□ 1.33
ERCC2-211ENST00000588652 NUTM2DQ5VT03 806 aaPredicted RBP23.38■■□□□ 1.33
ERCC2-211ENST00000588652 MYO5BQ9ULV0 1848 aa23.37■■□□□ 1.33
ERCC2-211ENST00000588652 CARD14Q9BXL6 1004 aa23.36■■□□□ 1.33
ERCC2-211ENST00000588652 REREQ9P2R6 1566 aa23.35■■□□□ 1.33
ERCC2-211ENST00000588652 ADAMTS8Q9UP79 889 aa23.35■■□□□ 1.33
ERCC2-211ENST00000588652 TMEM131LA2VDJ0 1609 aa23.35■■□□□ 1.33
ERCC2-211ENST00000588652 ZFYVE9O95405 1425 aa23.34■■□□□ 1.33
ERCC2-211ENST00000588652 CCDC136Q96JN2 1154 aa23.34■■□□□ 1.33
ERCC2-211ENST00000588652 ARHGEF28Q8N1W1 1705 aaKnown RBP23.33■■□□□ 1.33
ERCC2-211ENST00000588652 AGLP35573 1532 aa23.32■■□□□ 1.32
ERCC2-211ENST00000588652 WDR43Q15061 677 aaKnown RBP eCLIP23.3■■□□□ 1.32
ERCC2-211ENST00000588652 FBXO31Q5XUX0 539 aaPredicted RBP23.29■■□□□ 1.32
ERCC2-211ENST00000588652 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
ERCC2-211ENST00000588652 RRP1P56182 461 aaKnown RBP23.28■■□□□ 1.32
ERCC2-211ENST00000588652 RCAN3Q9UKA8 241 aa23.27■■□□□ 1.31
ERCC2-211ENST00000588652 PPP6R1Q9UPN7 881 aa23.26■■□□□ 1.31
ERCC2-211ENST00000588652 SLC12A5Q9H2X9 1139 aa23.25■■□□□ 1.31
ERCC2-211ENST00000588652 KIF13AQ9H1H9 1805 aa23.25■■□□□ 1.31
ERCC2-211ENST00000588652 TULP4Q9NRJ4 1543 aa23.24■■□□□ 1.31
ERCC2-211ENST00000588652 NSD3Q9BZ95 1437 aa23.24■■□□□ 1.31
ERCC2-211ENST00000588652 CLTCQ00610 1675 aaKnown RBP23.24■■□□□ 1.31
ERCC2-211ENST00000588652 PUS7Q96PZ0 661 aaKnown RBP23.23■■□□□ 1.31
ERCC2-211ENST00000588652 EVC2Q86UK5 1308 aa23.23■■□□□ 1.31
ERCC2-211ENST00000588652 ERICH6Q7L0X2 663 aa23.21■■□□□ 1.31
ERCC2-211ENST00000588652 USP32Q8NFA0 1604 aa23.2■■□□□ 1.3
ERCC2-211ENST00000588652 PLEKHH1Q9ULM0 1364 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms