RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 NKTRP30414 1462 aaKnown RBP23.98■■□□□ 1.43
IFT20-216ENST00000588477 SETD1AO15047 1707 aaKnown RBP23.98■■□□□ 1.43
IFT20-216ENST00000588477 FGD6Q6ZV73 1430 aa23.96■■□□□ 1.43
IFT20-216ENST00000588477 APLP2Q06481 763 aa23.96■■□□□ 1.43
IFT20-216ENST00000588477 GCC2Q8IWJ2 1684 aa23.95■■□□□ 1.43
IFT20-216ENST00000588477 MSH6P52701 1360 aa23.95■■□□□ 1.42
IFT20-216ENST00000588477 SLC52A1Q9NWF4 448 aa23.93■■□□□ 1.42
IFT20-216ENST00000588477 SLAIN2Q9P270 581 aa23.93■■□□□ 1.42
IFT20-216ENST00000588477 JCADQ9P266 1359 aa23.88■■□□□ 1.41
IFT20-216ENST00000588477 ZFYVE9O95405 1425 aa23.87■■□□□ 1.41
IFT20-216ENST00000588477 TMEM131LA2VDJ0 1609 aa23.87■■□□□ 1.41
IFT20-216ENST00000588477 COL16A1Q07092 1604 aaPredicted RBP23.87■■□□□ 1.41
IFT20-216ENST00000588477 PLEKHG1Q9ULL1 1385 aa23.86■■□□□ 1.41
IFT20-216ENST00000588477 RPRD2Q5VT52 1461 aaKnown RBP23.86■■□□□ 1.41
IFT20-216ENST00000588477 PPP1R15AO75807 674 aaPredicted RBP23.85■■□□□ 1.41
IFT20-216ENST00000588477 ADGRL2O95490 1459 aa23.85■■□□□ 1.41
IFT20-216ENST00000588477 RIMS2Q9UQ26 1411 aa23.84■■□□□ 1.41
IFT20-216ENST00000588477 HDGFP51858 240 aaKnown RBP23.83■■□□□ 1.41
IFT20-216ENST00000588477 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.83■■□□□ 1.41
IFT20-216ENST00000588477 ANKRD50Q9ULJ7 1429 aa23.81■■□□□ 1.4
IFT20-216ENST00000588477 C14orf37Q86TY3 774 aa23.8■■□□□ 1.4
IFT20-216ENST00000588477 TBX22Q9Y458 520 aa23.79■■□□□ 1.4
IFT20-216ENST00000588477 LRP6O75581 1613 aa23.78■■□□□ 1.4
IFT20-216ENST00000588477 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
IFT20-216ENST00000588477 FAM50AQ14320 339 aaKnown RBP23.78■■□□□ 1.4
IFT20-216ENST00000588477 E9PCH4 1651 aa23.78■■□□□ 1.4
IFT20-216ENST00000588477 NCOA3Q9Y6Q9 1424 aa23.77■■□□□ 1.4
IFT20-216ENST00000588477 SHPRHQ149N8 1683 aa23.77■■□□□ 1.4
IFT20-216ENST00000588477 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
IFT20-216ENST00000588477 MEX3CQ5U5Q3 659 aaKnown RBP23.76■■□□□ 1.39
IFT20-216ENST00000588477 SPATA31A6Q5VVP1 1343 aa23.76■■□□□ 1.39
IFT20-216ENST00000588477 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.75■■□□□ 1.39
IFT20-216ENST00000588477 UNC13BO14795 1591 aa23.74■■□□□ 1.39
IFT20-216ENST00000588477 AHDC1Q5TGY3 1603 aaPredicted RBP23.74■■□□□ 1.39
IFT20-216ENST00000588477 ADAMTS13Q76LX8 1427 aa23.74■■□□□ 1.39
IFT20-216ENST00000588477 DIP2AQ14689 1571 aa23.74■■□□□ 1.39
IFT20-216ENST00000588477 CADPS2Q86UW7 1296 aa23.73■■□□□ 1.39
IFT20-216ENST00000588477 ATF3P18847 181 aa23.72■■□□□ 1.39
IFT20-216ENST00000588477 ZNF772Q68DY9 489 aaPredicted RBP23.72■■□□□ 1.39
IFT20-216ENST00000588477 C19orf44Q9H6X5 657 aa23.72■■□□□ 1.39
IFT20-216ENST00000588477 TRIM52Q96A61 297 aa23.71■■□□□ 1.39
IFT20-216ENST00000588477 UPF1Q92900 1129 aaKnown RBP eCLIP23.69■■□□□ 1.38
IFT20-216ENST00000588477 PIK3R4Q99570 1358 aa23.68■■□□□ 1.38
IFT20-216ENST00000588477 TRPM2O94759 1503 aa23.68■■□□□ 1.38
IFT20-216ENST00000588477 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
IFT20-216ENST00000588477 AMOTL2Q9Y2J4 779 aa23.66■■□□□ 1.38
IFT20-216ENST00000588477 NUTM2BA6NNL0 878 aaPredicted RBP23.64■■□□□ 1.37
IFT20-216ENST00000588477 NUTM2EB1AL46 878 aaPredicted RBP23.64■■□□□ 1.37
IFT20-216ENST00000588477 BRINP3Q76B58 766 aa23.64■■□□□ 1.37
IFT20-216ENST00000588477 NUTM2AQ8IVF1 878 aaPredicted RBP23.64■■□□□ 1.37
IFT20-216ENST00000588477 PTPRUQ92729 1446 aa23.64■■□□□ 1.37
IFT20-216ENST00000588477 RXRBP28702 533 aa23.62■■□□□ 1.37
IFT20-216ENST00000588477 NHSL1Q5SYE7 1610 aa23.6■■□□□ 1.37
IFT20-216ENST00000588477 NRXN3Q9Y4C0 1643 aa23.59■■□□□ 1.37
IFT20-216ENST00000588477 XRN1Q8IZH2 1706 aaKnown RBP23.59■■□□□ 1.37
IFT20-216ENST00000588477 ASXL1Q8IXJ9 1541 aa23.58■■□□□ 1.36
IFT20-216ENST00000588477 DCCP43146 1447 aa23.57■■□□□ 1.36
IFT20-216ENST00000588477 SPHKAPQ2M3C7 1700 aa23.56■■□□□ 1.36
IFT20-216ENST00000588477 AFF2P51816 1311 aa23.56■■□□□ 1.36
IFT20-216ENST00000588477 NUP155O75694 1391 aa23.55■■□□□ 1.36
IFT20-216ENST00000588477 CDK12Q9NYV4 1490 aaPredicted RBP23.55■■□□□ 1.36
IFT20-216ENST00000588477 MST1RQ04912 1400 aa23.54■■□□□ 1.36
IFT20-216ENST00000588477 SETD5Q9C0A6 1442 aa23.54■■□□□ 1.36
IFT20-216ENST00000588477 ROCK1Q13464 1354 aa23.53■■□□□ 1.36
IFT20-216ENST00000588477 SETBP1Q9Y6X0 1596 aa23.53■■□□□ 1.36
IFT20-216ENST00000588477 LRRC59Q96AG4 307 aaKnown RBP23.51■■□□□ 1.35
IFT20-216ENST00000588477 NALCNQ8IZF0 1738 aa23.5■■□□□ 1.35
IFT20-216ENST00000588477 ZNF326Q5BKZ1 582 aaKnown RBP23.5■■□□□ 1.35
IFT20-216ENST00000588477 DDX17Q92841 729 aaKnown RBP23.49■■□□□ 1.35
IFT20-216ENST00000588477 C8orf37Q96NL8 207 aa23.48■■□□□ 1.35
IFT20-216ENST00000588477 METP08581 1390 aa23.48■■□□□ 1.35
IFT20-216ENST00000588477 ITGAEP38570 1179 aa23.47■■□□□ 1.35
IFT20-216ENST00000588477 QTRT2Q9H974 415 aaKnown RBP23.47■■□□□ 1.35
IFT20-216ENST00000588477 KIF1BO60333 1816 aa23.46■■□□□ 1.35
IFT20-216ENST00000588477 RGS12O14924 1447 aa23.44■■□□□ 1.34
IFT20-216ENST00000588477 ADGRL3Q9HAR2 1447 aa23.44■■□□□ 1.34
IFT20-216ENST00000588477 PNPLA6Q8IY17 1366 aa23.44■■□□□ 1.34
IFT20-216ENST00000588477 RBM6P78332 1123 aaKnown RBP23.44■■□□□ 1.34
IFT20-216ENST00000588477 CLTCL1P53675 1640 aa23.41■■□□□ 1.34
IFT20-216ENST00000588477 NEXMIFQ5QGS0 1516 aa23.41■■□□□ 1.34
IFT20-216ENST00000588477 NGLY1Q96IV0 654 aa23.39■■□□□ 1.33
IFT20-216ENST00000588477 ADAMTS2O95450 1211 aa23.38■■□□□ 1.33
IFT20-216ENST00000588477 LAMC1P11047 1609 aa23.37■■□□□ 1.33
IFT20-216ENST00000588477 C1orf167Q5SNV9 1468 aa23.36■■□□□ 1.33
IFT20-216ENST00000588477 ORAI2Q96SN7 254 aa23.32■■□□□ 1.32
IFT20-216ENST00000588477 USP21Q9UK80 565 aa23.31■■□□□ 1.32
IFT20-216ENST00000588477 SOS2Q07890 1332 aaPredicted RBP23.31■■□□□ 1.32
IFT20-216ENST00000588477 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
IFT20-216ENST00000588477 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
IFT20-216ENST00000588477 ATAD2Q6PL18 1390 aa23.28■■□□□ 1.32
IFT20-216ENST00000588477 PTCH1Q13635 1447 aa23.28■■□□□ 1.32
IFT20-216ENST00000588477 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.32
IFT20-216ENST00000588477 COL22A1Q8NFW1 1626 aaPredicted RBP23.27■■□□□ 1.32
IFT20-216ENST00000588477 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
IFT20-216ENST00000588477 PPLO60437 1756 aa23.26■■□□□ 1.31
IFT20-216ENST00000588477 VGFO15240 615 aaPredicted RBP23.25■■□□□ 1.31
IFT20-216ENST00000588477 FNBP4Q8N3X1 1017 aaPredicted RBP23.24■■□□□ 1.31
IFT20-216ENST00000588477 SRCAPQ6ZRS2 3230 aa23.24■■□□□ 1.31
IFT20-216ENST00000588477 EP400Q96L91 3159 aa23.22■■□□□ 1.31
IFT20-216ENST00000588477 ATRNO75882 1429 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms