RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 FARP1Q9Y4F1 1045 aaPredicted RBP7.64□□□□□ -1.19
LINC01538-201ENST00000588074 MAP3K9P80192 1104 aa7.63□□□□□ -1.19
LINC01538-201ENST00000588074 NPDC1Q9NQX5 325 aaPredicted RBP7.63□□□□□ -1.19
LINC01538-201ENST00000588074 BCCIPQ9P287 314 aaKnown RBP eCLIP7.63□□□□□ -1.19
LINC01538-201ENST00000588074 PLPP6Q8IY26 295 aa7.63□□□□□ -1.19
LINC01538-201ENST00000588074 TBC1D2Q9BYX2 928 aa7.62□□□□□ -1.19
LINC01538-201ENST00000588074 NAP1L2Q9ULW6 460 aaPredicted RBP7.62□□□□□ -1.19
LINC01538-201ENST00000588074 RRP9O43818 475 aaKnown RBP7.61□□□□□ -1.19
LINC01538-201ENST00000588074 SMARCA5O60264 1052 aaPredicted RBP7.61□□□□□ -1.19
LINC01538-201ENST00000588074 PPP1R12CQ9BZL4 782 aa7.61□□□□□ -1.19
LINC01538-201ENST00000588074 RTL5Q5HYW3 569 aaPredicted RBP7.61□□□□□ -1.19
LINC01538-201ENST00000588074 PPP2R2DQ66LE6 453 aa7.61□□□□□ -1.19
LINC01538-201ENST00000588074 IPO4Q8TEX9 1081 aaKnown RBP7.6□□□□□ -1.19
LINC01538-201ENST00000588074 TMEM259Q4ZIN3 620 aa7.6□□□□□ -1.19
LINC01538-201ENST00000588074 DPY19L2Q6NUT2 758 aa7.6□□□□□ -1.19
LINC01538-201ENST00000588074 DNAJC14Q6Y2X3 702 aaPredicted RBP7.6□□□□□ -1.19
LINC01538-201ENST00000588074 TRPC6Q9Y210 931 aa7.6□□□□□ -1.19
LINC01538-201ENST00000588074 GPR37L1O60883 481 aa7.59□□□□□ -1.19
LINC01538-201ENST00000588074 PTGER2P43116 358 aa7.59□□□□□ -1.19
LINC01538-201ENST00000588074 ABCC9O60706 1549 aa7.59□□□□□ -1.19
LINC01538-201ENST00000588074 PALM3A6NDB9 673 aaPredicted RBP7.59□□□□□ -1.19
LINC01538-201ENST00000588074 UCN2Q96RP3 112 aa7.59□□□□□ -1.19
LINC01538-201ENST00000588074 LMOD1P29536 600 aaPredicted RBP7.58□□□□□ -1.2
LINC01538-201ENST00000588074 ZNF16P17020 682 aaPredicted RBP7.58□□□□□ -1.2
LINC01538-201ENST00000588074 QPCTQ16769 361 aa7.58□□□□□ -1.2
LINC01538-201ENST00000588074 CSPP1Q1MSJ5 1256 aa7.58□□□□□ -1.2
LINC01538-201ENST00000588074 POLR3GLQ9BT43 218 aa7.58□□□□□ -1.2
LINC01538-201ENST00000588074 GOLGA2Q08379 1002 aa7.57□□□□□ -1.2
LINC01538-201ENST00000588074 WWC1Q8IX03 1113 aa7.57□□□□□ -1.2
LINC01538-201ENST00000588074 CWC22Q9HCG8 908 aaKnown RBP7.57□□□□□ -1.2
LINC01538-201ENST00000588074 GNEQ9Y223 722 aaKnown RBP7.57□□□□□ -1.2
LINC01538-201ENST00000588074 WASHC2CQ9Y4E1 1318 aa7.57□□□□□ -1.2
LINC01538-201ENST00000588074 C2orf72A6NCS6 295 aa7.56□□□□□ -1.2
LINC01538-201ENST00000588074 TMC2Q8TDI7 906 aa7.56□□□□□ -1.2
LINC01538-201ENST00000588074 TMEM106CQ9BVX2 250 aa7.56□□□□□ -1.2
LINC01538-201ENST00000588074 VAC14Q08AM6 782 aa7.56□□□□□ -1.2
LINC01538-201ENST00000588074 METTL3Q86U44 580 aaKnown RBP7.56□□□□□ -1.2
LINC01538-201ENST00000588074 GJD4Q96KN9 370 aaPredicted RBP7.56□□□□□ -1.2
LINC01538-201ENST00000588074 AP1G2O75843 785 aa7.54□□□□□ -1.2
LINC01538-201ENST00000588074 TCF3P15923 654 aa7.54□□□□□ -1.2
LINC01538-201ENST00000588074 MICALL2Q8IY33 904 aa7.54□□□□□ -1.2
LINC01538-201ENST00000588074 TFIP11Q9UBB9 837 aaKnown RBP7.54□□□□□ -1.2
LINC01538-201ENST00000588074 NOP58Q9Y2X3 529 aaKnown RBP7.54□□□□□ -1.2
LINC01538-201ENST00000588074 HSP90AA2PQ14568 343 aaPredicted RBP7.54□□□□□ -1.2
LINC01538-201ENST00000588074 PHLDB3Q6NSJ2 640 aa7.54□□□□□ -1.2
LINC01538-201ENST00000588074 RIC3Q7Z5B4 369 aa7.54□□□□□ -1.2
LINC01538-201ENST00000588074 ILDR1Q86SU0 546 aaPredicted RBP7.54□□□□□ -1.2
LINC01538-201ENST00000588074 FAM43AQ8N2R8 423 aa7.54□□□□□ -1.2
LINC01538-201ENST00000588074 WASHC2AQ641Q2 1341 aa7.54□□□□□ -1.2
LINC01538-201ENST00000588074 CALD1Q05682 793 aaKnown RBP7.53□□□□□ -1.2
LINC01538-201ENST00000588074 TEX2Q8IWB9 1127 aa7.53□□□□□ -1.2
LINC01538-201ENST00000588074 USP17L8P0C7I0 530 aa7.53□□□□□ -1.2
LINC01538-201ENST00000588074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.53□□□□□ -1.2
LINC01538-201ENST00000588074 TSR1Q2NL82 804 aaKnown RBP7.52□□□□□ -1.2
LINC01538-201ENST00000588074 KIF3CO14782 793 aa7.52□□□□□ -1.21
LINC01538-201ENST00000588074 ATG7O95352 703 aa7.52□□□□□ -1.21
LINC01538-201ENST00000588074 SPATA32Q96LK8 384 aa7.52□□□□□ -1.21
LINC01538-201ENST00000588074 HMX1Q9NP08 348 aaPredicted RBP7.52□□□□□ -1.21
LINC01538-201ENST00000588074 CENPJQ9HC77 1338 aaPredicted RBP7.52□□□□□ -1.21
LINC01538-201ENST00000588074 ZNF710Q8N1W2 664 aa7.51□□□□□ -1.21
LINC01538-201ENST00000588074 GIPC2Q8TF65 315 aa7.51□□□□□ -1.21
LINC01538-201ENST00000588074 SPIRE2Q8WWL2 714 aa7.51□□□□□ -1.21
LINC01538-201ENST00000588074 STK32AQ8WU08 396 aa7.5□□□□□ -1.21
LINC01538-201ENST00000588074 DRC1Q96MC2 740 aa7.5□□□□□ -1.21
LINC01538-201ENST00000588074 BCL2L13Q9BXK5 485 aa7.5□□□□□ -1.21
LINC01538-201ENST00000588074 ALG2Q9H553 416 aa7.5□□□□□ -1.21
LINC01538-201ENST00000588074 PCDHB15Q9Y5E8 787 aa7.5□□□□□ -1.21
LINC01538-201ENST00000588074 CANXP27824 592 aaKnown RBP7.5□□□□□ -1.21
LINC01538-201ENST00000588074 PPP1R1BQ9UD71 204 aaPredicted RBP7.5□□□□□ -1.21
LINC01538-201ENST00000588074 EVI5O60447 810 aa7.49□□□□□ -1.21
LINC01538-201ENST00000588074 GTF2E1P29083 439 aaPredicted RBP7.49□□□□□ -1.21
LINC01538-201ENST00000588074 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
LINC01538-201ENST00000588074 PRR7Q8TB68 274 aa7.49□□□□□ -1.21
LINC01538-201ENST00000588074 SREK1Q8WXA9 508 aaKnown RBP7.49□□□□□ -1.21
LINC01538-201ENST00000588074 PRDM4Q9UKN5 801 aa7.49□□□□□ -1.21
LINC01538-201ENST00000588074 ZMIZ1Q9ULJ6 1067 aa7.49□□□□□ -1.21
LINC01538-201ENST00000588074 NCLP19338 710 aaKnown RBP7.49□□□□□ -1.21
LINC01538-201ENST00000588074 CNGB1Q14028 1251 aaPredicted RBP7.49□□□□□ -1.21
LINC01538-201ENST00000588074 FTSJ3Q8IY81 847 aaKnown RBP7.49□□□□□ -1.21
LINC01538-201ENST00000588074 CHMP4BQ9H444 224 aaKnown RBP7.49□□□□□ -1.21
LINC01538-201ENST00000588074 MAFBQ9Y5Q3 323 aaPredicted RBP7.49□□□□□ -1.21
LINC01538-201ENST00000588074 TMEM164Q5U3C3 297 aa7.48□□□□□ -1.21
LINC01538-201ENST00000588074 PXYLP1Q8TE99 480 aa7.48□□□□□ -1.21
LINC01538-201ENST00000588074 RBM33Q96EV2 1170 aaKnown RBP7.48□□□□□ -1.21
LINC01538-201ENST00000588074 PHF12Q96QT6 1004 aa7.48□□□□□ -1.21
LINC01538-201ENST00000588074 SLAIN2Q9P270 581 aa7.48□□□□□ -1.21
LINC01538-201ENST00000588074 ARID4BQ4LE39 1312 aaPredicted RBP7.48□□□□□ -1.21
LINC01538-201ENST00000588074 MOXD2PA6NHM9 499 aa7.48□□□□□ -1.21
LINC01538-201ENST00000588074 SOCS7O14512 581 aa7.48□□□□□ -1.21
LINC01538-201ENST00000588074 SCNN1AP37088 669 aa7.48□□□□□ -1.21
LINC01538-201ENST00000588074 EN1Q05925 392 aaPredicted RBP7.48□□□□□ -1.21
LINC01538-201ENST00000588074 CABLES1Q8TDN4 633 aa7.48□□□□□ -1.21
LINC01538-201ENST00000588074 MAP3K7O43318 606 aa7.47□□□□□ -1.21
LINC01538-201ENST00000588074 NDUFV2P19404 249 aa7.47□□□□□ -1.21
LINC01538-201ENST00000588074 RSBN1LQ6PCB5 846 aaPredicted RBP7.47□□□□□ -1.21
LINC01538-201ENST00000588074 TBC1D9Q6ZT07 1266 aa7.47□□□□□ -1.21
LINC01538-201ENST00000588074 TRIM34Q9BYJ4 488 aa7.47□□□□□ -1.21
LINC01538-201ENST00000588074 NDUFB9Q9Y6M9 179 aa7.47□□□□□ -1.21
LINC01538-201ENST00000588074 SIRT1Q96EB6 747 aa7.47□□□□□ -1.21
LINC01538-201ENST00000588074 PRM3Q9NNZ6 103 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms