RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 KCNA6P17658 529 aa23.45■■□□□ 1.34
HDAC5-206ENST00000587776 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
HDAC5-206ENST00000587776 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
HDAC5-206ENST00000587776 UNC13BO14795 1591 aa23.43■■□□□ 1.34
HDAC5-206ENST00000587776 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
HDAC5-206ENST00000587776 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
HDAC5-206ENST00000587776 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
HDAC5-206ENST00000587776 RBM33Q96EV2 1170 aaKnown RBP23.4■■□□□ 1.34
HDAC5-206ENST00000587776 TMEM131LA2VDJ0 1609 aa23.4■■□□□ 1.34
HDAC5-206ENST00000587776 E9PCH4 1651 aa23.38■■□□□ 1.33
HDAC5-206ENST00000587776 ZFYVE9O95405 1425 aa23.37■■□□□ 1.33
HDAC5-206ENST00000587776 RIMS2Q9UQ26 1411 aa23.37■■□□□ 1.33
HDAC5-206ENST00000587776 MSH6P52701 1360 aa23.37■■□□□ 1.33
HDAC5-206ENST00000587776 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
HDAC5-206ENST00000587776 PLEKHG1Q9ULL1 1385 aa23.36■■□□□ 1.33
HDAC5-206ENST00000587776 PHLPP1O60346 1717 aa23.36■■□□□ 1.33
HDAC5-206ENST00000587776 CHGAP10645 457 aaKnown RBP23.35■■□□□ 1.33
HDAC5-206ENST00000587776 IQGAP3Q86VI3 1631 aa23.34■■□□□ 1.33
HDAC5-206ENST00000587776 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
HDAC5-206ENST00000587776 ROCK1Q13464 1354 aa23.28■■□□□ 1.32
HDAC5-206ENST00000587776 DIP2AQ14689 1571 aa23.28■■□□□ 1.32
HDAC5-206ENST00000587776 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
HDAC5-206ENST00000587776 C14orf37Q86TY3 774 aa23.26■■□□□ 1.31
HDAC5-206ENST00000587776 SLAIN2Q9P270 581 aa23.26■■□□□ 1.31
HDAC5-206ENST00000587776 ITGAEP38570 1179 aa23.25■■□□□ 1.31
HDAC5-206ENST00000587776 NUTM2DQ5VT03 806 aaPredicted RBP23.25■■□□□ 1.31
HDAC5-206ENST00000587776 TBX22Q9Y458 520 aa23.24■■□□□ 1.31
HDAC5-206ENST00000587776 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.23■■□□□ 1.31
HDAC5-206ENST00000587776 NUP155O75694 1391 aa23.23■■□□□ 1.31
HDAC5-206ENST00000587776 SPHKAPQ2M3C7 1700 aa23.22■■□□□ 1.31
HDAC5-206ENST00000587776 TRPM2O94759 1503 aa23.22■■□□□ 1.31
HDAC5-206ENST00000587776 COL16A1Q07092 1604 aaPredicted RBP23.2■■□□□ 1.3
HDAC5-206ENST00000587776 ADAMTS13Q76LX8 1427 aa23.2■■□□□ 1.3
HDAC5-206ENST00000587776 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.3
HDAC5-206ENST00000587776 JCADQ9P266 1359 aa23.19■■□□□ 1.3
HDAC5-206ENST00000587776 POTEAQ6S8J7 498 aa23.18■■□□□ 1.3
HDAC5-206ENST00000587776 PIK3R4Q99570 1358 aa23.17■■□□□ 1.3
HDAC5-206ENST00000587776 ATF3P18847 181 aa23.15■■□□□ 1.3
HDAC5-206ENST00000587776 SETD1AO15047 1707 aaKnown RBP23.15■■□□□ 1.3
HDAC5-206ENST00000587776 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.29
HDAC5-206ENST00000587776 PPARGC1BQ86YN6 1023 aaKnown RBP23.14■■□□□ 1.29
HDAC5-206ENST00000587776 AHDC1Q5TGY3 1603 aaPredicted RBP23.12■■□□□ 1.29
HDAC5-206ENST00000587776 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
HDAC5-206ENST00000587776 SHPRHQ149N8 1683 aa23.12■■□□□ 1.29
HDAC5-206ENST00000587776 NRXN3Q9Y4C0 1643 aa23.11■■□□□ 1.29
HDAC5-206ENST00000587776 ZNF326Q5BKZ1 582 aaKnown RBP23.11■■□□□ 1.29
HDAC5-206ENST00000587776 AMOTL2Q9Y2J4 779 aa23.11■■□□□ 1.29
HDAC5-206ENST00000587776 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
HDAC5-206ENST00000587776 MEX3CQ5U5Q3 659 aaKnown RBP23.1■■□□□ 1.29
HDAC5-206ENST00000587776 KIF1BO60333 1816 aa23.1■■□□□ 1.29
HDAC5-206ENST00000587776 SETBP1Q9Y6X0 1596 aa23.1■■□□□ 1.29
HDAC5-206ENST00000587776 PTPRUQ92729 1446 aa23.09■■□□□ 1.29
HDAC5-206ENST00000587776 SPATA31A6Q5VVP1 1343 aa23.07■■□□□ 1.28
HDAC5-206ENST00000587776 LRP6O75581 1613 aa23.06■■□□□ 1.28
HDAC5-206ENST00000587776 CLTCL1P53675 1640 aa23.06■■□□□ 1.28
HDAC5-206ENST00000587776 DCCP43146 1447 aa23.04■■□□□ 1.28
HDAC5-206ENST00000587776 ASXL1Q8IXJ9 1541 aa23.02■■□□□ 1.28
HDAC5-206ENST00000587776 BRINP3Q76B58 766 aa23.01■■□□□ 1.27
HDAC5-206ENST00000587776 NEXMIFQ5QGS0 1516 aa23.01■■□□□ 1.27
HDAC5-206ENST00000587776 NHSL1Q5SYE7 1610 aa23■■□□□ 1.27
HDAC5-206ENST00000587776 NALCNQ8IZF0 1738 aa23■■□□□ 1.27
HDAC5-206ENST00000587776 ZNF772Q68DY9 489 aaPredicted RBP22.98■■□□□ 1.27
HDAC5-206ENST00000587776 METP08581 1390 aa22.98■■□□□ 1.27
HDAC5-206ENST00000587776 MST1RQ04912 1400 aa22.97■■□□□ 1.27
HDAC5-206ENST00000587776 NUTM2BA6NNL0 878 aaPredicted RBP22.96■■□□□ 1.27
HDAC5-206ENST00000587776 NUTM2EB1AL46 878 aaPredicted RBP22.96■■□□□ 1.27
HDAC5-206ENST00000587776 NUTM2AQ8IVF1 878 aaPredicted RBP22.96■■□□□ 1.27
HDAC5-206ENST00000587776 ADGRL3Q9HAR2 1447 aa22.95■■□□□ 1.26
HDAC5-206ENST00000587776 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
HDAC5-206ENST00000587776 NAIPQ13075 1403 aa22.93■■□□□ 1.26
HDAC5-206ENST00000587776 TRIM52Q96A61 297 aa22.93■■□□□ 1.26
HDAC5-206ENST00000587776 SETD5Q9C0A6 1442 aa22.91■■□□□ 1.26
HDAC5-206ENST00000587776 PPLO60437 1756 aa22.89■■□□□ 1.25
HDAC5-206ENST00000587776 RXRBP28702 533 aa22.87■■□□□ 1.25
HDAC5-206ENST00000587776 LRRC59Q96AG4 307 aaKnown RBP22.87■■□□□ 1.25
HDAC5-206ENST00000587776 AFF2P51816 1311 aa22.85■■□□□ 1.25
HDAC5-206ENST00000587776 PTCH1Q13635 1447 aa22.85■■□□□ 1.25
HDAC5-206ENST00000587776 VGFO15240 615 aaPredicted RBP22.85■■□□□ 1.25
HDAC5-206ENST00000587776 DDX17Q92841 729 aaKnown RBP22.85■■□□□ 1.25
HDAC5-206ENST00000587776 HFM1A2PYH4 1435 aa22.83■■□□□ 1.25
HDAC5-206ENST00000587776 C1orf167Q5SNV9 1468 aa22.83■■□□□ 1.25
HDAC5-206ENST00000587776 PNPLA6Q8IY17 1366 aa22.82■■□□□ 1.24
HDAC5-206ENST00000587776 C8orf37Q96NL8 207 aa22.82■■□□□ 1.24
HDAC5-206ENST00000587776 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
HDAC5-206ENST00000587776 CDK12Q9NYV4 1490 aaPredicted RBP22.8■■□□□ 1.24
HDAC5-206ENST00000587776 LAMC1P11047 1609 aa22.8■■□□□ 1.24
HDAC5-206ENST00000587776 RPGRIP1LQ68CZ1 1315 aa22.8■■□□□ 1.24
HDAC5-206ENST00000587776 ROBO2Q9HCK4 1378 aa22.79■■□□□ 1.24
HDAC5-206ENST00000587776 UPF1Q92900 1129 aaKnown RBP eCLIP22.79■■□□□ 1.245e-6■■□□□ 14.3
HDAC5-206ENST00000587776 PRAG1Q86YV5 1406 aa22.74■■□□□ 1.23
HDAC5-206ENST00000587776 ADAMTS2O95450 1211 aa22.74■■□□□ 1.23
HDAC5-206ENST00000587776 ORAI2Q96SN7 254 aa22.74■■□□□ 1.23
HDAC5-206ENST00000587776 NGLY1Q96IV0 654 aa22.73■■□□□ 1.23
HDAC5-206ENST00000587776 QTRT2Q9H974 415 aaKnown RBP22.73■■□□□ 1.23
HDAC5-206ENST00000587776 IFT172Q9UG01 1749 aa22.72■■□□□ 1.23
HDAC5-206ENST00000587776 RGS12O14924 1447 aa22.72■■□□□ 1.23
HDAC5-206ENST00000587776 CDC42BPGQ6DT37 1551 aa22.72■■□□□ 1.23
HDAC5-206ENST00000587776 RBM6P78332 1123 aaKnown RBP22.71■■□□□ 1.23
HDAC5-206ENST00000587776 FOXD1Q16676 465 aa22.71■■□□□ 1.23
HDAC5-206ENST00000587776 CCDC144AA2RUR9 1427 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms