RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 RBM33Q96EV2 1170 aaKnown RBP21.72■■□□□ 1.07
DNMT1-213ENST00000587604 NKTRP30414 1462 aaKnown RBP21.71■■□□□ 1.07
DNMT1-213ENST00000587604 MYO5BQ9ULV0 1848 aa21.71■■□□□ 1.07
DNMT1-213ENST00000587604 NWD1Q149M9 1564 aa21.7■■□□□ 1.06
DNMT1-213ENST00000587604 ZFYVE9O95405 1425 aa21.7■■□□□ 1.06
DNMT1-213ENST00000587604 RGS17Q9UGC6 210 aaPredicted RBP21.69■■□□□ 1.06
DNMT1-213ENST00000587604 PLEKHG1Q9ULL1 1385 aa21.69■■□□□ 1.06
DNMT1-213ENST00000587604 GCC2Q8IWJ2 1684 aa21.69■■□□□ 1.06
DNMT1-213ENST00000587604 CHD2O14647 1828 aaKnown RBP21.67■■□□□ 1.06
DNMT1-213ENST00000587604 ROBO1Q9Y6N7 1651 aa21.67■■□□□ 1.06
DNMT1-213ENST00000587604 TMEM131LA2VDJ0 1609 aa21.67■■□□□ 1.06
DNMT1-213ENST00000587604 RIMS2Q9UQ26 1411 aa21.67■■□□□ 1.06
DNMT1-213ENST00000587604 PPP1R15AO75807 674 aaPredicted RBP21.67■■□□□ 1.06
DNMT1-213ENST00000587604 UNC13BO14795 1591 aa21.66■■□□□ 1.06
DNMT1-213ENST00000587604 MSH6P52701 1360 aa21.66■■□□□ 1.06
DNMT1-213ENST00000587604 ROCK1Q13464 1354 aa21.65■■□□□ 1.06
DNMT1-213ENST00000587604 TBX22Q9Y458 520 aa21.65■■□□□ 1.06
DNMT1-213ENST00000587604 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.64■■□□□ 1.05
DNMT1-213ENST00000587604 SLAIN2Q9P270 581 aa21.64■■□□□ 1.05
DNMT1-213ENST00000587604 CHGAP10645 457 aaKnown RBP21.63■■□□□ 1.05
DNMT1-213ENST00000587604 E9PCH4 1651 aa21.62■■□□□ 1.05
DNMT1-213ENST00000587604 NCOA3Q9Y6Q9 1424 aa21.59■■□□□ 1.05
DNMT1-213ENST00000587604 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.05
DNMT1-213ENST00000587604 NUTM2DQ5VT03 806 aaPredicted RBP21.57■■□□□ 1.04
DNMT1-213ENST00000587604 NUP155O75694 1391 aa21.57■■□□□ 1.04
DNMT1-213ENST00000587604 ADAMTS13Q76LX8 1427 aa21.56■■□□□ 1.04
DNMT1-213ENST00000587604 PHLPP1O60346 1717 aa21.55■■□□□ 1.04
DNMT1-213ENST00000587604 POTEAQ6S8J7 498 aa21.55■■□□□ 1.04
DNMT1-213ENST00000587604 PIK3R4Q99570 1358 aa21.55■■□□□ 1.04
DNMT1-213ENST00000587604 DIP2AQ14689 1571 aa21.53■■□□□ 1.04
DNMT1-213ENST00000587604 JCADQ9P266 1359 aa21.53■■□□□ 1.04
DNMT1-213ENST00000587604 ITGAEP38570 1179 aa21.53■■□□□ 1.04
DNMT1-213ENST00000587604 C14orf37Q86TY3 774 aa21.53■■□□□ 1.04
DNMT1-213ENST00000587604 C19orf44Q9H6X5 657 aa21.53■■□□□ 1.04
DNMT1-213ENST00000587604 CADPS2Q86UW7 1296 aa21.51■■□□□ 1.03
DNMT1-213ENST00000587604 ATF3P18847 181 aa21.49■■□□□ 1.03
DNMT1-213ENST00000587604 AMOTL2Q9Y2J4 779 aa21.49■■□□□ 1.03
DNMT1-213ENST00000587604 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.49■■□□□ 1.03
DNMT1-213ENST00000587604 TRPM2O94759 1503 aa21.47■■□□□ 1.03
DNMT1-213ENST00000587604 COL16A1Q07092 1604 aaPredicted RBP21.47■■□□□ 1.03
DNMT1-213ENST00000587604 PPARGC1BQ86YN6 1023 aaKnown RBP21.45■■□□□ 1.02
DNMT1-213ENST00000587604 SPATA31A6Q5VVP1 1343 aa21.44■■□□□ 1.02
DNMT1-213ENST00000587604 PTPRUQ92729 1446 aa21.44■■□□□ 1.02
DNMT1-213ENST00000587604 SPHKAPQ2M3C7 1700 aa21.43■■□□□ 1.02
DNMT1-213ENST00000587604 AHDC1Q5TGY3 1603 aaPredicted RBP21.42■■□□□ 1.02
DNMT1-213ENST00000587604 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
DNMT1-213ENST00000587604 SETBP1Q9Y6X0 1596 aa21.4■■□□□ 1.02
DNMT1-213ENST00000587604 NRXN3Q9Y4C0 1643 aa21.4■■□□□ 1.02
DNMT1-213ENST00000587604 BRINP3Q76B58 766 aa21.39■■□□□ 1.01
DNMT1-213ENST00000587604 DCCP43146 1447 aa21.38■■□□□ 1.01
DNMT1-213ENST00000587604 XRN1Q8IZH2 1706 aaKnown RBP21.38■■□□□ 1.01
DNMT1-213ENST00000587604 LRP6O75581 1613 aa21.37■■□□□ 1.01
DNMT1-213ENST00000587604 MEX3CQ5U5Q3 659 aaKnown RBP21.37■■□□□ 1.01
DNMT1-213ENST00000587604 SHPRHQ149N8 1683 aa21.37■■□□□ 1.01
DNMT1-213ENST00000587604 ZNF772Q68DY9 489 aaPredicted RBP21.36■■□□□ 1.01
DNMT1-213ENST00000587604 METP08581 1390 aa21.36■■□□□ 1.01
DNMT1-213ENST00000587604 CLTCL1P53675 1640 aa21.32■■□□□ 1
DNMT1-213ENST00000587604 MST1RQ04912 1400 aa21.31■■□□□ 1
DNMT1-213ENST00000587604 RRBP1Q9P2E9 1410 aaKnown RBP21.31■■□□□ 1
DNMT1-213ENST00000587604 NEXMIFQ5QGS0 1516 aa21.31■■□□□ 1
DNMT1-213ENST00000587604 SETD1AO15047 1707 aaKnown RBP21.31■■□□□ 1
DNMT1-213ENST00000587604 KIF1BO60333 1816 aa21.31■■□□□ 1
DNMT1-213ENST00000587604 NAIPQ13075 1403 aa21.3■■□□□ 1
DNMT1-213ENST00000587604 ASXL1Q8IXJ9 1541 aa21.3■■□□□ 1
DNMT1-213ENST00000587604 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
DNMT1-213ENST00000587604 NUTM2BA6NNL0 878 aaPredicted RBP21.28■■□□□ 1
DNMT1-213ENST00000587604 NUTM2EB1AL46 878 aaPredicted RBP21.28■■□□□ 1
DNMT1-213ENST00000587604 NUTM2AQ8IVF1 878 aaPredicted RBP21.28■■□□□ 1
DNMT1-213ENST00000587604 LRRC59Q96AG4 307 aaKnown RBP21.28■■□□□ 1
DNMT1-213ENST00000587604 ADGRL3Q9HAR2 1447 aa21.28■■□□□ 1
DNMT1-213ENST00000587604 NHSL1Q5SYE7 1610 aa21.26■□□□□ 0.99
DNMT1-213ENST00000587604 VGFO15240 615 aaPredicted RBP21.26■□□□□ 0.99
DNMT1-213ENST00000587604 RXRBP28702 533 aa21.24■□□□□ 0.99
DNMT1-213ENST00000587604 TRIM52Q96A61 297 aa21.24■□□□□ 0.99
DNMT1-213ENST00000587604 NALCNQ8IZF0 1738 aa21.23■□□□□ 0.99
DNMT1-213ENST00000587604 RPGRIP1LQ68CZ1 1315 aa21.22■□□□□ 0.99
DNMT1-213ENST00000587604 DDX17Q92841 729 aaKnown RBP21.21■□□□□ 0.99
DNMT1-213ENST00000587604 UPF1Q92900 1129 aaKnown RBP eCLIP21.2■□□□□ 0.98
DNMT1-213ENST00000587604 AFF2P51816 1311 aa21.2■□□□□ 0.98
DNMT1-213ENST00000587604 HFM1A2PYH4 1435 aa21.2■□□□□ 0.98
DNMT1-213ENST00000587604 PTCH1Q13635 1447 aa21.2■□□□□ 0.98
DNMT1-213ENST00000587604 SLC4A1APQ9BWU0 796 aaKnown RBP21.19■□□□□ 0.98
DNMT1-213ENST00000587604 C1orf167Q5SNV9 1468 aa21.19■□□□□ 0.98
DNMT1-213ENST00000587604 PNPLA6Q8IY17 1366 aa21.18■□□□□ 0.98
DNMT1-213ENST00000587604 ROBO2Q9HCK4 1378 aa21.18■□□□□ 0.98
DNMT1-213ENST00000587604 CDK12Q9NYV4 1490 aaPredicted RBP21.18■□□□□ 0.98
DNMT1-213ENST00000587604 PRAG1Q86YV5 1406 aa21.15■□□□□ 0.98
DNMT1-213ENST00000587604 C8orf37Q96NL8 207 aa21.15■□□□□ 0.98
DNMT1-213ENST00000587604 LAMC1P11047 1609 aa21.15■□□□□ 0.98
DNMT1-213ENST00000587604 ORAI2Q96SN7 254 aa21.14■□□□□ 0.97
DNMT1-213ENST00000587604 PPLO60437 1756 aa21.14■□□□□ 0.97
DNMT1-213ENST00000587604 SOS2Q07890 1332 aaPredicted RBP21.13■□□□□ 0.97
DNMT1-213ENST00000587604 QTRT2Q9H974 415 aaKnown RBP21.13■□□□□ 0.97
DNMT1-213ENST00000587604 RBM6P78332 1123 aaKnown RBP21.11■□□□□ 0.97
DNMT1-213ENST00000587604 NGLY1Q96IV0 654 aa21.1■□□□□ 0.97
DNMT1-213ENST00000587604 ADAMTS2O95450 1211 aa21.09■□□□□ 0.97
DNMT1-213ENST00000587604 FOXD1Q16676 465 aa21.08■□□□□ 0.97
DNMT1-213ENST00000587604 ADGRF5Q8IZF2 1346 aa21.05■□□□□ 0.96
DNMT1-213ENST00000587604 CCDC144AA2RUR9 1427 aa21.04■□□□□ 0.96
DNMT1-213ENST00000587604 RGS12O14924 1447 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms