RNA–Protein interactions for RNA: ENST00000587396.1

CXXC1-210, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-210ENST00000587396 PTPN23Q9H3S7 1636 aa28.32■■■□□ 2.12
CXXC1-210ENST00000587396 KDM5AP29375 1690 aaKnown RBP28.32■■■□□ 2.12
CXXC1-210ENST00000587396 TRIM52Q96A61 297 aa28.31■■■□□ 2.12
CXXC1-210ENST00000587396 SLC52A1Q9NWF4 448 aa28.3■■■□□ 2.12
CXXC1-210ENST00000587396 ANKRD30AQ9BXX3 1397 aa28.29■■■□□ 2.12
CXXC1-210ENST00000587396 MEX3CQ5U5Q3 659 aaKnown RBP28.29■■■□□ 2.12
CXXC1-210ENST00000587396 LRP6O75581 1613 aa28.29■■■□□ 2.12
CXXC1-210ENST00000587396 PPP1R15AO75807 674 aaPredicted RBP28.28■■■□□ 2.12
CXXC1-210ENST00000587396 C14orf37Q86TY3 774 aa28.27■■■□□ 2.12
CXXC1-210ENST00000587396 UPF1Q92900 1129 aaKnown RBP eCLIP28.27■■■□□ 2.12
CXXC1-210ENST00000587396 COL16A1Q07092 1604 aaPredicted RBP28.25■■■□□ 2.11
CXXC1-210ENST00000587396 PLEKHG1Q9ULL1 1385 aa28.24■■■□□ 2.11
CXXC1-210ENST00000587396 NUTM2DQ5VT03 806 aaPredicted RBP28.24■■■□□ 2.11
CXXC1-210ENST00000587396 ZFYVE9O95405 1425 aa28.24■■■□□ 2.11
CXXC1-210ENST00000587396 FGD6Q6ZV73 1430 aa28.23■■■□□ 2.11
CXXC1-210ENST00000587396 RIMS2Q9UQ26 1411 aa28.23■■■□□ 2.11
CXXC1-210ENST00000587396 ZNF772Q68DY9 489 aaPredicted RBP28.21■■■□□ 2.11
CXXC1-210ENST00000587396 SPATA31A6Q5VVP1 1343 aa28.2■■■□□ 2.11
CXXC1-210ENST00000587396 CHGAP10645 457 aaKnown RBP28.2■■■□□ 2.1
CXXC1-210ENST00000587396 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
CXXC1-210ENST00000587396 APLP2Q06481 763 aa28.18■■■□□ 2.1
CXXC1-210ENST00000587396 TBX22Q9Y458 520 aa28.18■■■□□ 2.1
CXXC1-210ENST00000587396 NUTM2BA6NNL0 878 aaPredicted RBP28.17■■■□□ 2.1
CXXC1-210ENST00000587396 NUTM2EB1AL46 878 aaPredicted RBP28.17■■■□□ 2.1
CXXC1-210ENST00000587396 NUTM2AQ8IVF1 878 aaPredicted RBP28.17■■■□□ 2.1
CXXC1-210ENST00000587396 HDGFP51858 240 aaKnown RBP28.16■■■□□ 2.1
CXXC1-210ENST00000587396 MYO5BQ9ULV0 1848 aa28.15■■■□□ 2.1
CXXC1-210ENST00000587396 ATF3P18847 181 aa28.15■■■□□ 2.1
CXXC1-210ENST00000587396 CADPS2Q86UW7 1296 aa28.14■■■□□ 2.1
CXXC1-210ENST00000587396 RXRBP28702 533 aa28.13■■■□□ 2.09
CXXC1-210ENST00000587396 C19orf44Q9H6X5 657 aa28.13■■■□□ 2.09
CXXC1-210ENST00000587396 GCC2Q8IWJ2 1684 aa28.12■■■□□ 2.09
CXXC1-210ENST00000587396 ADAMTS13Q76LX8 1427 aa28.1■■■□□ 2.09
CXXC1-210ENST00000587396 NCOA3Q9Y6Q9 1424 aa28.1■■■□□ 2.09
CXXC1-210ENST00000587396 RPRD2Q5VT52 1461 aaKnown RBP28.1■■■□□ 2.09
CXXC1-210ENST00000587396 FAM50AQ14320 339 aaKnown RBP28.1■■■□□ 2.09
CXXC1-210ENST00000587396 TMEM131LA2VDJ0 1609 aa28.1■■■□□ 2.09
CXXC1-210ENST00000587396 BRINP3Q76B58 766 aa28.09■■■□□ 2.09
CXXC1-210ENST00000587396 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.09■■■□□ 2.09
CXXC1-210ENST00000587396 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.09■■■□□ 2.09
CXXC1-210ENST00000587396 ANKRD50Q9ULJ7 1429 aa28.09■■■□□ 2.09
CXXC1-210ENST00000587396 AHDC1Q5TGY3 1603 aaPredicted RBP28.08■■■□□ 2.09
CXXC1-210ENST00000587396 ADGRL2O95490 1459 aa28.07■■■□□ 2.08
CXXC1-210ENST00000587396 AMOTL2Q9Y2J4 779 aa28.06■■■□□ 2.08
CXXC1-210ENST00000587396 SHPRHQ149N8 1683 aa28.04■■■□□ 2.08
CXXC1-210ENST00000587396 AFF2P51816 1311 aa28.04■■■□□ 2.08
CXXC1-210ENST00000587396 PTPRUQ92729 1446 aa28.02■■■□□ 2.08
CXXC1-210ENST00000587396 DIP2AQ14689 1571 aa28■■■□□ 2.07
CXXC1-210ENST00000587396 PIK3R4Q99570 1358 aa27.99■■■□□ 2.07
CXXC1-210ENST00000587396 DDX17Q92841 729 aaKnown RBP27.98■■■□□ 2.07
CXXC1-210ENST00000587396 C8orf37Q96NL8 207 aa27.96■■■□□ 2.07
CXXC1-210ENST00000587396 QTRT2Q9H974 415 aaKnown RBP27.94■■■□□ 2.06
CXXC1-210ENST00000587396 CDK12Q9NYV4 1490 aaPredicted RBP27.94■■■□□ 2.06
CXXC1-210ENST00000587396 ASXL1Q8IXJ9 1541 aa27.93■■■□□ 2.06
CXXC1-210ENST00000587396 TRPM2O94759 1503 aa27.92■■■□□ 2.06
CXXC1-210ENST00000587396 E9PCH4 1651 aa27.91■■■□□ 2.06
CXXC1-210ENST00000587396 RGS12O14924 1447 aa27.91■■■□□ 2.06
CXXC1-210ENST00000587396 SETD5Q9C0A6 1442 aa27.91■■■□□ 2.06
CXXC1-210ENST00000587396 MST1RQ04912 1400 aa27.9■■■□□ 2.06
CXXC1-210ENST00000587396 LRRC59Q96AG4 307 aaKnown RBP27.89■■■□□ 2.06
CXXC1-210ENST00000587396 UNC13BO14795 1591 aa27.87■■■□□ 2.05
CXXC1-210ENST00000587396 DCCP43146 1447 aa27.87■■■□□ 2.05
CXXC1-210ENST00000587396 RBM6P78332 1123 aaKnown RBP27.87■■■□□ 2.05
CXXC1-210ENST00000587396 SRCAPQ6ZRS2 3230 aa27.86■■■□□ 2.05
CXXC1-210ENST00000587396 ADAMTS2O95450 1211 aa27.85■■■□□ 2.05
CXXC1-210ENST00000587396 PNPLA6Q8IY17 1366 aa27.85■■■□□ 2.05
CXXC1-210ENST00000587396 METP08581 1390 aa27.84■■■□□ 2.05
CXXC1-210ENST00000587396 NUP155O75694 1391 aa27.83■■■□□ 2.05
CXXC1-210ENST00000587396 ZNF326Q5BKZ1 582 aaKnown RBP27.82■■■□□ 2.04
CXXC1-210ENST00000587396 NGLY1Q96IV0 654 aa27.82■■■□□ 2.04
CXXC1-210ENST00000587396 NHSL1Q5SYE7 1610 aa27.81■■■□□ 2.04
CXXC1-210ENST00000587396 NRXN3Q9Y4C0 1643 aa27.8■■■□□ 2.04
CXXC1-210ENST00000587396 XRN1Q8IZH2 1706 aaKnown RBP27.8■■■□□ 2.04
CXXC1-210ENST00000587396 IQGAP3Q86VI3 1631 aa27.77■■■□□ 2.04
CXXC1-210ENST00000587396 SETBP1Q9Y6X0 1596 aa27.75■■■□□ 2.03
CXXC1-210ENST00000587396 ITGAEP38570 1179 aa27.75■■■□□ 2.03
CXXC1-210ENST00000587396 ADGRL3Q9HAR2 1447 aa27.75■■■□□ 2.03
CXXC1-210ENST00000587396 USP21Q9UK80 565 aa27.72■■■□□ 2.03
CXXC1-210ENST00000587396 ORAI2Q96SN7 254 aa27.71■■■□□ 2.03
CXXC1-210ENST00000587396 ROCK1Q13464 1354 aa27.71■■■□□ 2.03
CXXC1-210ENST00000587396 C1orf167Q5SNV9 1468 aa27.7■■■□□ 2.02
CXXC1-210ENST00000587396 ATAD2Q6PL18 1390 aa27.69■■■□□ 2.02
CXXC1-210ENST00000587396 NALCNQ8IZF0 1738 aa27.67■■■□□ 2.02
CXXC1-210ENST00000587396 TRPC5Q9UL62 973 aaPredicted RBP27.65■■■□□ 2.02
CXXC1-210ENST00000587396 SOS2Q07890 1332 aaPredicted RBP27.64■■■□□ 2.01
CXXC1-210ENST00000587396 ZRANB1Q9UGI0 708 aa27.62■■■□□ 2.01
CXXC1-210ENST00000587396 FNBP4Q8N3X1 1017 aaPredicted RBP27.61■■■□□ 2.01
CXXC1-210ENST00000587396 ROBO2Q9HCK4 1378 aa27.6■■■□□ 2.01
CXXC1-210ENST00000587396 SPHKAPQ2M3C7 1700 aa27.59■■■□□ 2.01
CXXC1-210ENST00000587396 NEXMIFQ5QGS0 1516 aa27.59■■■□□ 2.01
CXXC1-210ENST00000587396 ATRNO75882 1429 aa27.58■■■□□ 2
CXXC1-210ENST00000587396 PTCH1Q13635 1447 aa27.55■■■□□ 2
CXXC1-210ENST00000587396 CLTCL1P53675 1640 aa27.55■■■□□ 2
CXXC1-210ENST00000587396 PPARGC1BQ86YN6 1023 aaKnown RBP27.54■■■□□ 2
CXXC1-210ENST00000587396 XPCQ01831 940 aaPredicted RBP27.53■■■□□ 2
CXXC1-210ENST00000587396 LAMC1P11047 1609 aa27.52■■■□□ 2
CXXC1-210ENST00000587396 EP400Q96L91 3159 aa27.52■■■□□ 2
CXXC1-210ENST00000587396 FOXD1Q16676 465 aa27.5■■□□□ 1.99
CXXC1-210ENST00000587396 ESCO1Q5FWF5 840 aa27.5■■□□□ 1.99
CXXC1-210ENST00000587396 BCL9LQ86UU0 1499 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms