RNA–Protein interactions for RNA: ENST00000586035.1

PDCD5-204, Transcript of programmed cell death 5, human

TSL 3 BASIC

Gene PDCD5, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD5-204	ENST00000586035	ZFYVE9	O95405	1425 aa		32.78	■■■□□ 2.84
PDCD5-204	ENST00000586035	SENP3	Q9H4L4	574 aa	Predicted RBP	32.78	■■■□□ 2.84
PDCD5-204	ENST00000586035	TMEM94	Q12767	1356 aa		32.74	■■■□□ 2.83
PDCD5-204	ENST00000586035	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.74	■■■□□ 2.83
PDCD5-204	ENST00000586035	KCNA6	P17658	529 aa		32.73	■■■□□ 2.83
PDCD5-204	ENST00000586035	RIMS2	Q9UQ26	1411 aa		32.71	■■■□□ 2.83
PDCD5-204	ENST00000586035	CHD2	O14647	1828 aa	Known RBP	32.7	■■■□□ 2.82
PDCD5-204	ENST00000586035	NKTR	P30414	1462 aa	Known RBP	32.69	■■■□□ 2.82
PDCD5-204	ENST00000586035	ITGAE	P38570	1179 aa		32.69	■■■□□ 2.82
PDCD5-204	ENST00000586035	PLEKHG1	Q9ULL1	1385 aa		32.68	■■■□□ 2.82
PDCD5-204	ENST00000586035	RBM33	Q96EV2	1170 aa	Known RBP	32.67	■■■□□ 2.82
PDCD5-204	ENST00000586035	NUP155	O75694	1391 aa		32.63	■■■□□ 2.81
PDCD5-204	ENST00000586035	PROSER2	Q86WR7	435 aa	Predicted RBP	32.63	■■■□□ 2.81
PDCD5-204	ENST00000586035	BCAN	Q96GW7	911 aa		32.63	■■■□□ 2.81
PDCD5-204	ENST00000586035	ROBO1	Q9Y6N7	1651 aa		32.62	■■■□□ 2.81
PDCD5-204	ENST00000586035	FAM135B	Q49AJ0	1406 aa		32.61	■■■□□ 2.81
PDCD5-204	ENST00000586035	PPP1R15A	O75807	674 aa	Predicted RBP	32.59	■■■□□ 2.81
PDCD5-204	ENST00000586035	CHGA	P10645	457 aa	Known RBP	32.59	■■■□□ 2.81
PDCD5-204	ENST00000586035	SPHKAP	Q2M3C7	1700 aa		32.57	■■■□□ 2.81
PDCD5-204	ENST00000586035	ADAMTS13	Q76LX8	1427 aa		32.57	■■■□□ 2.8
PDCD5-204	ENST00000586035	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.55	■■■□□ 2.8
PDCD5-204	ENST00000586035	HDGF	P51858	240 aa	Known RBP	32.53	■■■□□ 2.8
PDCD5-204	ENST00000586035	PHF23	Q9BUL5	403 aa	Predicted RBP	32.53	■■■□□ 2.8
PDCD5-204	ENST00000586035	DIP2A	Q14689	1571 aa		32.53	■■■□□ 2.8
PDCD5-204	ENST00000586035	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.51	■■■□□ 2.79
PDCD5-204	ENST00000586035	TBX22	Q9Y458	520 aa		32.51	■■■□□ 2.79
PDCD5-204	ENST00000586035	RRBP1	Q9P2E9	1410 aa	Known RBP	32.51	■■■□□ 2.79
PDCD5-204	ENST00000586035	MSH6	P52701	1360 aa		32.5	■■■□□ 2.79
PDCD5-204	ENST00000586035	NRXN3	Q9Y4C0	1643 aa		32.46	■■■□□ 2.79
PDCD5-204	ENST00000586035	PHLPP1	O60346	1717 aa		32.43	■■■□□ 2.78
PDCD5-204	ENST00000586035	TRPM2	O94759	1503 aa		32.42	■■■□□ 2.78
PDCD5-204	ENST00000586035	CLTCL1	P53675	1640 aa		32.41	■■■□□ 2.78
PDCD5-204	ENST00000586035	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.41	■■■□□ 2.78
PDCD5-204	ENST00000586035	PIK3R4	Q99570	1358 aa		32.41	■■■□□ 2.78
PDCD5-204	ENST00000586035	NAIP	Q13075	1403 aa		32.41	■■■□□ 2.78
PDCD5-204	ENST00000586035	RGS17	Q9UGC6	210 aa	Predicted RBP	32.4	■■■□□ 2.78
PDCD5-204	ENST00000586035	PTPRU	Q92729	1446 aa		32.4	■■■□□ 2.78
PDCD5-204	ENST00000586035	SLAIN2	Q9P270	581 aa		32.39	■■■□□ 2.78
PDCD5-204	ENST00000586035	NCOA3	Q9Y6Q9	1424 aa		32.39	■■■□□ 2.78
PDCD5-204	ENST00000586035	SETBP1	Q9Y6X0	1596 aa		32.38	■■■□□ 2.77
PDCD5-204	ENST00000586035	XRN1	Q8IZH2	1706 aa	Known RBP	32.37	■■■□□ 2.77
PDCD5-204	ENST00000586035	COL16A1	Q07092	1604 aa	Predicted RBP	32.34	■■■□□ 2.77
PDCD5-204	ENST00000586035	KIF1B	O60333	1816 aa		32.33	■■■□□ 2.77
PDCD5-204	ENST00000586035	NEXMIF	Q5QGS0	1516 aa		32.32	■■■□□ 2.76
PDCD5-204	ENST00000586035	C14orf37	Q86TY3	774 aa		32.3	■■■□□ 2.76
PDCD5-204	ENST00000586035	AMOTL2	Q9Y2J4	779 aa		32.3	■■■□□ 2.76
PDCD5-204	ENST00000586035	ZNF326	Q5BKZ1	582 aa	Known RBP	32.27	■■■□□ 2.76
PDCD5-204	ENST00000586035	HFM1	A2PYH4	1435 aa		32.26	■■■□□ 2.75
PDCD5-204	ENST00000586035	C19orf44	Q9H6X5	657 aa		32.25	■■■□□ 2.75
PDCD5-204	ENST00000586035	MET	P08581	1390 aa		32.24	■■■□□ 2.75
PDCD5-204	ENST00000586035	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.24	■■■□□ 2.75
PDCD5-204	ENST00000586035	JCAD	Q9P266	1359 aa		32.23	■■■□□ 2.75
PDCD5-204	ENST00000586035	CADPS2	Q86UW7	1296 aa		32.23	■■■□□ 2.75
PDCD5-204	ENST00000586035	ATF3	P18847	181 aa		32.2	■■■□□ 2.75
PDCD5-204	ENST00000586035	POTEA	Q6S8J7	498 aa		32.19	■■■□□ 2.74
PDCD5-204	ENST00000586035	SETD1A	O15047	1707 aa	Known RBP	32.19	■■■□□ 2.74
PDCD5-204	ENST00000586035	DCC	P43146	1447 aa		32.17	■■■□□ 2.74
PDCD5-204	ENST00000586035	NALCN	Q8IZF0	1738 aa		32.16	■■■□□ 2.74
PDCD5-204	ENST00000586035	SHPRH	Q149N8	1683 aa		32.15	■■■□□ 2.74
PDCD5-204	ENST00000586035	TRIM52	Q96A61	297 aa		32.15	■■■□□ 2.74
PDCD5-204	ENST00000586035	LRP6	O75581	1613 aa		32.15	■■■□□ 2.74
PDCD5-204	ENST00000586035	PPL	O60437	1756 aa		32.12	■■■□□ 2.73
PDCD5-204	ENST00000586035	BRINP3	Q76B58	766 aa		32.12	■■■□□ 2.73
PDCD5-204	ENST00000586035	ASXL1	Q8IXJ9	1541 aa		32.11	■■■□□ 2.73
PDCD5-204	ENST00000586035	MST1R	Q04912	1400 aa		32.11	■■■□□ 2.73
PDCD5-204	ENST00000586035	NHSL1	Q5SYE7	1610 aa		32.1	■■■□□ 2.73
PDCD5-204	ENST00000586035	ADGRL3	Q9HAR2	1447 aa		32.09	■■■□□ 2.73
PDCD5-204	ENST00000586035	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.08	■■■□□ 2.73
PDCD5-204	ENST00000586035	SPATA31A6	Q5VVP1	1343 aa		32.04	■■■□□ 2.72
PDCD5-204	ENST00000586035	PTCH1	Q13635	1447 aa		32	■■■□□ 2.71
PDCD5-204	ENST00000586035	FOXD1	Q16676	465 aa		32	■■■□□ 2.71
PDCD5-204	ENST00000586035	VGF	O15240	615 aa	Predicted RBP	31.99	■■■□□ 2.71
PDCD5-204	ENST00000586035	ROBO2	Q9HCK4	1378 aa		31.98	■■■□□ 2.71
PDCD5-204	ENST00000586035	RPGRIP1L	Q68CZ1	1315 aa		31.98	■■■□□ 2.71
PDCD5-204	ENST00000586035	PRAG1	Q86YV5	1406 aa		31.97	■■■□□ 2.71
PDCD5-204	ENST00000586035	SETD5	Q9C0A6	1442 aa		31.96	■■■□□ 2.71
PDCD5-204	ENST00000586035	IFT172	Q9UG01	1749 aa		31.95	■■■□□ 2.7
PDCD5-204	ENST00000586035	MEX3C	Q5U5Q3	659 aa	Known RBP	31.92	■■■□□ 2.7
PDCD5-204	ENST00000586035	DDX17	Q92841	729 aa	Known RBP	31.92	■■■□□ 2.7
PDCD5-204	ENST00000586035	C1orf167	Q5SNV9	1468 aa		31.91	■■■□□ 2.7
PDCD5-204	ENST00000586035	LAMC1	P11047	1609 aa		31.9	■■■□□ 2.7
PDCD5-204	ENST00000586035	CCDC144A	A2RUR9	1427 aa		31.89	■■■□□ 2.7
PDCD5-204	ENST00000586035	SPATA31E1	Q6ZUB1	1445 aa		31.89	■■■□□ 2.7
PDCD5-204	ENST00000586035	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.87	■■■□□ 2.69
PDCD5-204	ENST00000586035	NUTM2E	B1AL46	878 aa	Predicted RBP	31.87	■■■□□ 2.69
PDCD5-204	ENST00000586035	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.87	■■■□□ 2.69
PDCD5-204	ENST00000586035	ADGRF5	Q8IZF2	1346 aa		31.85	■■■□□ 2.69
PDCD5-204	ENST00000586035	PNPLA6	Q8IY17	1366 aa		31.84	■■■□□ 2.69
PDCD5-204	ENST00000586035	MPHOSPH9	Q99550	1183 aa		31.84	■■■□□ 2.69
PDCD5-204	ENST00000586035	ZNF772	Q68DY9	489 aa	Predicted RBP	31.83	■■■□□ 2.69
PDCD5-204	ENST00000586035	LRRC59	Q96AG4	307 aa	Known RBP	31.82	■■■□□ 2.68
PDCD5-204	ENST00000586035	RGL3	Q3MIN7	710 aa		31.8	■■■□□ 2.68
PDCD5-204	ENST00000586035	CDC42BPG	Q6DT37	1551 aa		31.8	■■■□□ 2.68
PDCD5-204	ENST00000586035	ORAI2	Q96SN7	254 aa		31.79	■■■□□ 2.68
PDCD5-204	ENST00000586035	KNDC1	Q76NI1	1749 aa		31.78	■■■□□ 2.68
PDCD5-204	ENST00000586035	AFF2	P51816	1311 aa		31.75	■■■□□ 2.67
PDCD5-204	ENST00000586035	ANKRD30B	Q9BXX2	1392 aa		31.75	■■■□□ 2.67
PDCD5-204	ENST00000586035	TECPR2	O15040	1411 aa		31.75	■■■□□ 2.67
PDCD5-204	ENST00000586035	PIK3C2G	O75747	1445 aa		31.75	■■■□□ 2.67
PDCD5-204	ENST00000586035	SOS2	Q07890	1332 aa	Predicted RBP	31.74	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms