RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 HFM1A2PYH4 1435 aa20.22■□□□□ 0.83
SREBF1-223ENST00000584760 NUP155O75694 1391 aa20.21■□□□□ 0.83
SREBF1-223ENST00000584760 TMEM2Q9UHN6 1383 aa20.2■□□□□ 0.82
SREBF1-223ENST00000584760 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
SREBF1-223ENST00000584760 TMEM131LA2VDJ0 1609 aa20.18■□□□□ 0.82
SREBF1-223ENST00000584760 IDI1Q13907 227 aa20.18■□□□□ 0.82
SREBF1-223ENST00000584760 RBM33Q96EV2 1170 aaKnown RBP20.18■□□□□ 0.82
SREBF1-223ENST00000584760 TMEM94Q12767 1356 aa20.18■□□□□ 0.82
SREBF1-223ENST00000584760 FAM135BQ49AJ0 1406 aa20.18■□□□□ 0.82
SREBF1-223ENST00000584760 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
SREBF1-223ENST00000584760 SLC26A8Q96RN1 970 aa20.17■□□□□ 0.82
SREBF1-223ENST00000584760 KCNA6P17658 529 aa20.15■□□□□ 0.82
SREBF1-223ENST00000584760 POTEAQ6S8J7 498 aa20.15■□□□□ 0.82
SREBF1-223ENST00000584760 SLC52A1Q9NWF4 448 aa20.15■□□□□ 0.82
SREBF1-223ENST00000584760 XIRP1Q702N8 1843 aaKnown RBP20.14■□□□□ 0.81
SREBF1-223ENST00000584760 BCANQ96GW7 911 aa20.12■□□□□ 0.81
SREBF1-223ENST00000584760 ZFYVE9O95405 1425 aa20.1■□□□□ 0.81
SREBF1-223ENST00000584760 TRPM2O94759 1503 aa20.07■□□□□ 0.8
SREBF1-223ENST00000584760 CLTCL1P53675 1640 aa20.06■□□□□ 0.8
SREBF1-223ENST00000584760 SLAIN2Q9P270 581 aa20.05■□□□□ 0.8
SREBF1-223ENST00000584760 ROBO1Q9Y6N7 1651 aa20.05■□□□□ 0.8
SREBF1-223ENST00000584760 RIMS2Q9UQ26 1411 aa20.03■□□□□ 0.8
SREBF1-223ENST00000584760 MSH6P52701 1360 aa20.03■□□□□ 0.8
SREBF1-223ENST00000584760 KIF1BO60333 1816 aa20.02■□□□□ 0.79
SREBF1-223ENST00000584760 NWD1Q149M9 1564 aa20■□□□□ 0.79
SREBF1-223ENST00000584760 NKTRP30414 1462 aaKnown RBP20■□□□□ 0.79
SREBF1-223ENST00000584760 PPP1R15AO75807 674 aaPredicted RBP19.99■□□□□ 0.79
SREBF1-223ENST00000584760 PLEKHG1Q9ULL1 1385 aa19.98■□□□□ 0.79
SREBF1-223ENST00000584760 JCADQ9P266 1359 aa19.97■□□□□ 0.79
SREBF1-223ENST00000584760 TRIM52Q96A61 297 aa19.97■□□□□ 0.79
SREBF1-223ENST00000584760 CHGAP10645 457 aaKnown RBP19.96■□□□□ 0.79
SREBF1-223ENST00000584760 HDGFP51858 240 aaKnown RBP19.96■□□□□ 0.79
SREBF1-223ENST00000584760 CHD2O14647 1828 aaKnown RBP19.96■□□□□ 0.79
SREBF1-223ENST00000584760 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
SREBF1-223ENST00000584760 C14orf37Q86TY3 774 aa19.95■□□□□ 0.78
SREBF1-223ENST00000584760 NRXN3Q9Y4C0 1643 aa19.94■□□□□ 0.78
SREBF1-223ENST00000584760 NEXMIFQ5QGS0 1516 aa19.94■□□□□ 0.78
SREBF1-223ENST00000584760 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
SREBF1-223ENST00000584760 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
SREBF1-223ENST00000584760 PHLPP1O60346 1717 aa19.93■□□□□ 0.78
SREBF1-223ENST00000584760 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
SREBF1-223ENST00000584760 ADAMTS13Q76LX8 1427 aa19.92■□□□□ 0.78
SREBF1-223ENST00000584760 SETBP1Q9Y6X0 1596 aa19.91■□□□□ 0.78
SREBF1-223ENST00000584760 MEX3CQ5U5Q3 659 aaKnown RBP19.91■□□□□ 0.78
SREBF1-223ENST00000584760 NUTM2DQ5VT03 806 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-223ENST00000584760 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.91■□□□□ 0.78
SREBF1-223ENST00000584760 PPLO60437 1756 aa19.88■□□□□ 0.77
SREBF1-223ENST00000584760 SETD1AO15047 1707 aaKnown RBP19.88■□□□□ 0.77
SREBF1-223ENST00000584760 RAB3GAP2Q9H2M9 1393 aa19.88■□□□□ 0.77
SREBF1-223ENST00000584760 SPATA31A6Q5VVP1 1343 aa19.87■□□□□ 0.77
SREBF1-223ENST00000584760 ATF3P18847 181 aa19.87■□□□□ 0.77
SREBF1-223ENST00000584760 ZNF772Q68DY9 489 aaPredicted RBP19.86■□□□□ 0.77
SREBF1-223ENST00000584760 CADPS2Q86UW7 1296 aa19.86■□□□□ 0.77
SREBF1-223ENST00000584760 C19orf44Q9H6X5 657 aa19.86■□□□□ 0.77
SREBF1-223ENST00000584760 NCOA3Q9Y6Q9 1424 aa19.85■□□□□ 0.77
SREBF1-223ENST00000584760 ACIN1Q9UKV3 1341 aaKnown RBP19.85■□□□□ 0.77
SREBF1-223ENST00000584760 LRP6O75581 1613 aa19.85■□□□□ 0.77
SREBF1-223ENST00000584760 COL16A1Q07092 1604 aaPredicted RBP19.85■□□□□ 0.77
SREBF1-223ENST00000584760 FOXD1Q16676 465 aa19.85■□□□□ 0.77
SREBF1-223ENST00000584760 MPHOSPH9Q99550 1183 aa19.85■□□□□ 0.77
SREBF1-223ENST00000584760 XRN1Q8IZH2 1706 aaKnown RBP19.85■□□□□ 0.77
SREBF1-223ENST00000584760 IFT172Q9UG01 1749 aa19.85■□□□□ 0.77
SREBF1-223ENST00000584760 UPF1Q92900 1129 aaKnown RBP eCLIP19.83■□□□□ 0.77
SREBF1-223ENST00000584760 PIK3R4Q99570 1358 aa19.83■□□□□ 0.76
SREBF1-223ENST00000584760 NUTM2BA6NNL0 878 aaPredicted RBP19.82■□□□□ 0.76
SREBF1-223ENST00000584760 NUTM2EB1AL46 878 aaPredicted RBP19.82■□□□□ 0.76
SREBF1-223ENST00000584760 ZNF326Q5BKZ1 582 aaKnown RBP19.82■□□□□ 0.76
SREBF1-223ENST00000584760 NUTM2AQ8IVF1 878 aaPredicted RBP19.82■□□□□ 0.76
SREBF1-223ENST00000584760 CCDC144AA2RUR9 1427 aa19.82■□□□□ 0.76
SREBF1-223ENST00000584760 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
SREBF1-223ENST00000584760 SPATA31E1Q6ZUB1 1445 aa19.79■□□□□ 0.76
SREBF1-223ENST00000584760 RXRBP28702 533 aa19.79■□□□□ 0.76
SREBF1-223ENST00000584760 BRINP3Q76B58 766 aa19.79■□□□□ 0.76
SREBF1-223ENST00000584760 PTPRUQ92729 1446 aa19.78■□□□□ 0.76
SREBF1-223ENST00000584760 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.78■□□□□ 0.76
SREBF1-223ENST00000584760 AHDC1Q5TGY3 1603 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-223ENST00000584760 RPGRIP1LQ68CZ1 1315 aa19.75■□□□□ 0.75
SREBF1-223ENST00000584760 METP08581 1390 aa19.73■□□□□ 0.75
SREBF1-223ENST00000584760 SHPRHQ149N8 1683 aa19.72■□□□□ 0.75
SREBF1-223ENST00000584760 AFF2P51816 1311 aa19.72■□□□□ 0.75
SREBF1-223ENST00000584760 HRCP23327 699 aa19.71■□□□□ 0.75
SREBF1-223ENST00000584760 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-223ENST00000584760 PRAG1Q86YV5 1406 aa19.68■□□□□ 0.74
SREBF1-223ENST00000584760 NALCNQ8IZF0 1738 aa19.68■□□□□ 0.74
SREBF1-223ENST00000584760 DDX17Q92841 729 aaKnown RBP19.68■□□□□ 0.74
SREBF1-223ENST00000584760 LRRC59Q96AG4 307 aaKnown RBP19.68■□□□□ 0.74
SREBF1-223ENST00000584760 ANKRD30BQ9BXX2 1392 aa19.68■□□□□ 0.74
SREBF1-223ENST00000584760 C8orf37Q96NL8 207 aa19.67■□□□□ 0.74
SREBF1-223ENST00000584760 DCCP43146 1447 aa19.67■□□□□ 0.74
SREBF1-223ENST00000584760 ASXL1Q8IXJ9 1541 aa19.66■□□□□ 0.74
SREBF1-223ENST00000584760 QTRT2Q9H974 415 aaKnown RBP19.66■□□□□ 0.74
SREBF1-223ENST00000584760 MST1RQ04912 1400 aa19.66■□□□□ 0.74
SREBF1-223ENST00000584760 PIK3C2GO75747 1445 aa19.65■□□□□ 0.74
SREBF1-223ENST00000584760 PTCH1Q13635 1447 aa19.65■□□□□ 0.74
SREBF1-223ENST00000584760 MYOM2P54296 1465 aa19.65■□□□□ 0.74
SREBF1-223ENST00000584760 CDK12Q9NYV4 1490 aaPredicted RBP19.65■□□□□ 0.74
SREBF1-223ENST00000584760 RGL3Q3MIN7 710 aa19.64■□□□□ 0.73
SREBF1-223ENST00000584760 ADGRF5Q8IZF2 1346 aa19.64■□□□□ 0.73
SREBF1-223ENST00000584760 KNDC1Q76NI1 1749 aa19.63■□□□□ 0.73
SREBF1-223ENST00000584760 LAMC1P11047 1609 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms