RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 FAM161AQ3B820 660 aa10.77□□□□□ -0.69
SMCHD1-206ENST00000581631 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
SMCHD1-206ENST00000581631 EMID1Q96A84 441 aaPredicted RBP10.77□□□□□ -0.69
SMCHD1-206ENST00000581631 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.69
SMCHD1-206ENST00000581631 SLC4A3P48751 1232 aa10.76□□□□□ -0.69
SMCHD1-206ENST00000581631 TRAF7Q6Q0C0 670 aa10.76□□□□□ -0.69
SMCHD1-206ENST00000581631 SEMA3EO15041 775 aa10.75□□□□□ -0.69
SMCHD1-206ENST00000581631 P3H3Q8IVL6 736 aa10.75□□□□□ -0.69
SMCHD1-206ENST00000581631 ACTN4O43707 911 aaKnown RBP10.74□□□□□ -0.69
SMCHD1-206ENST00000581631 SLC10A3P09131 477 aa10.74□□□□□ -0.69
SMCHD1-206ENST00000581631 GGCXP38435 758 aa10.74□□□□□ -0.69
SMCHD1-206ENST00000581631 NUTM2FA1L443 756 aa10.73□□□□□ -0.69
SMCHD1-206ENST00000581631 TLL1O43897 1013 aa10.73□□□□□ -0.69
SMCHD1-206ENST00000581631 FCHSD2O94868 740 aa10.73□□□□□ -0.69
SMCHD1-206ENST00000581631 RNF223E7ERA6 249 aa10.72□□□□□ -0.69
SMCHD1-206ENST00000581631 TRIM67Q6ZTA4 783 aa10.71□□□□□ -0.69
SMCHD1-206ENST00000581631 PXYLP1Q8TE99 480 aa10.71□□□□□ -0.69
SMCHD1-206ENST00000581631 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.7□□□□□ -0.7
SMCHD1-206ENST00000581631 CFHP08603 1231 aa10.7□□□□□ -0.7
SMCHD1-206ENST00000581631 PDZRN3Q9UPQ7 1066 aa10.69□□□□□ -0.7
SMCHD1-206ENST00000581631 TESPA1A2RU30 521 aaPredicted RBP10.68□□□□□ -0.7
SMCHD1-206ENST00000581631 GPR37O15354 613 aa10.68□□□□□ -0.7
SMCHD1-206ENST00000581631 KMT5BQ4FZB7 885 aa10.68□□□□□ -0.7
SMCHD1-206ENST00000581631 ANKLE1Q8NAG6 615 aa10.66□□□□□ -0.7
SMCHD1-206ENST00000581631 HIC1Q14526 733 aa10.65□□□□□ -0.7
SMCHD1-206ENST00000581631 METTL3Q86U44 580 aaKnown RBP10.65□□□□□ -0.7
SMCHD1-206ENST00000581631 S1PR4O95977 384 aa10.64□□□□□ -0.71
SMCHD1-206ENST00000581631 ADH1BP00325 375 aa10.64□□□□□ -0.71
SMCHD1-206ENST00000581631 OATP04181 439 aa10.64□□□□□ -0.71
SMCHD1-206ENST00000581631 SLC19A1P41440 591 aa10.64□□□□□ -0.71
SMCHD1-206ENST00000581631 PPEF1O14829 653 aaPredicted RBP10.63□□□□□ -0.71
SMCHD1-206ENST00000581631 RBM26Q5T8P6 1007 aaKnown RBP10.63□□□□□ -0.71
SMCHD1-206ENST00000581631 SPRYD7Q5W111 196 aa10.63□□□□□ -0.71
SMCHD1-206ENST00000581631 FECHP22830 423 aa10.62□□□□□ -0.71
SMCHD1-206ENST00000581631 LIAT1Q6ZQX7 453 aa10.62□□□□□ -0.71
SMCHD1-206ENST00000581631 NR1I2O75469 434 aa10.6□□□□□ -0.71
SMCHD1-206ENST00000581631 PRR20EP86478 221 aa10.6□□□□□ -0.71
SMCHD1-206ENST00000581631 PRR20CP86479 221 aa10.6□□□□□ -0.71
SMCHD1-206ENST00000581631 PRR20DP86480 221 aa10.6□□□□□ -0.71
SMCHD1-206ENST00000581631 PRR20BP86481 221 aa10.6□□□□□ -0.71
SMCHD1-206ENST00000581631 PRR20AP86496 221 aa10.6□□□□□ -0.71
SMCHD1-206ENST00000581631 PLA2G2CQ5R387 149 aa10.6□□□□□ -0.71
SMCHD1-206ENST00000581631 ZNF598Q86UK7 904 aaKnown RBP10.6□□□□□ -0.71
SMCHD1-206ENST00000581631 GNPATO15228 680 aa10.59□□□□□ -0.71
SMCHD1-206ENST00000581631 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
SMCHD1-206ENST00000581631 SCUBE3Q8IX30 993 aa10.58□□□□□ -0.72
SMCHD1-206ENST00000581631 GDF9O60383 454 aa10.56□□□□□ -0.72
SMCHD1-206ENST00000581631 PUS10Q3MIT2 529 aaKnown RBP10.56□□□□□ -0.72
SMCHD1-206ENST00000581631 SLC6A16Q9GZN6 736 aa10.56□□□□□ -0.72
SMCHD1-206ENST00000581631 DAXXQ9UER7 740 aaPredicted RBP10.55□□□□□ -0.72
SMCHD1-206ENST00000581631 ZNF697Q5TEC3 545 aa10.54□□□□□ -0.72
SMCHD1-206ENST00000581631 PHOX2BQ99453 314 aa10.54□□□□□ -0.72
SMCHD1-206ENST00000581631 MORN1Q5T089 497 aa10.53□□□□□ -0.72
SMCHD1-206ENST00000581631 SMYD5Q6GMV2 418 aa10.53□□□□□ -0.72
SMCHD1-206ENST00000581631 THAP11Q96EK4 314 aa10.53□□□□□ -0.72
SMCHD1-206ENST00000581631 DGAT1O75907 488 aa10.52□□□□□ -0.73
SMCHD1-206ENST00000581631 MYT1Q01538 1121 aa10.52□□□□□ -0.73
SMCHD1-206ENST00000581631 ZNF787Q6DD87 383 aa10.52□□□□□ -0.73
SMCHD1-206ENST00000581631 NLRP7Q8WX94 980 aa10.51□□□□□ -0.73
SMCHD1-206ENST00000581631 SPSB2Q99619 263 aa10.51□□□□□ -0.73
SMCHD1-206ENST00000581631 RSPH4AQ5TD94 716 aa10.5□□□□□ -0.73
SMCHD1-206ENST00000581631 FUT2Q10981 343 aa10.49□□□□□ -0.73
SMCHD1-206ENST00000581631 PKD2L1Q9P0L9 805 aa10.48□□□□□ -0.73
SMCHD1-206ENST00000581631 TNFRSF10AO00220 468 aa10.47□□□□□ -0.73
SMCHD1-206ENST00000581631 GCGRP47871 477 aa10.47□□□□□ -0.73
SMCHD1-206ENST00000581631 FAM160A2Q8N612 972 aaPredicted RBP10.47□□□□□ -0.73
SMCHD1-206ENST00000581631 RDH13Q8NBN7 331 aa10.47□□□□□ -0.73
SMCHD1-206ENST00000581631 DDX11L8A8MPP1 907 aa10.46□□□□□ -0.73
SMCHD1-206ENST00000581631 PKDCCQ504Y2 493 aa10.46□□□□□ -0.73
SMCHD1-206ENST00000581631 ATP6V1AP38606 617 aa10.45□□□□□ -0.74
SMCHD1-206ENST00000581631 SLC27A5Q9Y2P5 690 aa10.45□□□□□ -0.74
SMCHD1-206ENST00000581631 SALL2Q9Y467 1007 aaPredicted RBP10.45□□□□□ -0.74
SMCHD1-206ENST00000581631 RPIAP49247 311 aa10.44□□□□□ -0.74
SMCHD1-206ENST00000581631 ZNF775Q96BV0 537 aaPredicted RBP10.44□□□□□ -0.74
SMCHD1-206ENST00000581631 FAM187AA6NFU0 413 aa10.43□□□□□ -0.74
SMCHD1-206ENST00000581631 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
SMCHD1-206ENST00000581631 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
SMCHD1-206ENST00000581631 SULF1Q8IWU6 871 aa10.43□□□□□ -0.74
SMCHD1-206ENST00000581631 POTECB2RU33 542 aa10.42□□□□□ -0.74
SMCHD1-206ENST00000581631 BRICD5Q6PL45 260 aa10.42□□□□□ -0.74
SMCHD1-206ENST00000581631 PRDM9Q9NQV7 894 aa10.42□□□□□ -0.74
SMCHD1-206ENST00000581631 KDM2AQ9Y2K7 1162 aa10.42□□□□□ -0.74
SMCHD1-206ENST00000581631 FCF1Q9Y324 198 aaKnown RBP10.42□□□□□ -0.74
SMCHD1-206ENST00000581631 FMNL1O95466 1100 aaPredicted RBP10.41□□□□□ -0.74
SMCHD1-206ENST00000581631 MSS51Q4VC12 460 aa10.4□□□□□ -0.74
SMCHD1-206ENST00000581631 RNF19BQ6ZMZ0 732 aa10.39□□□□□ -0.75
SMCHD1-206ENST00000581631 AAASQ9NRG9 546 aa10.39□□□□□ -0.75
SMCHD1-206ENST00000581631 TOR4AQ9NXH8 423 aa10.39□□□□□ -0.75
SMCHD1-206ENST00000581631 CD46P15529 392 aa10.38□□□□□ -0.75
SMCHD1-206ENST00000581631 ST8SIA5O15466 376 aa10.37□□□□□ -0.75
SMCHD1-206ENST00000581631 CRIPAKQ8N1N5 446 aa10.37□□□□□ -0.75
SMCHD1-206ENST00000581631 AVPP01185 164 aa10.36□□□□□ -0.75
SMCHD1-206ENST00000581631 FOXC1Q12948 553 aa10.36□□□□□ -0.75
SMCHD1-206ENST00000581631 MAP2K5Q13163 448 aa10.35□□□□□ -0.75
SMCHD1-206ENST00000581631 MMP16P51512 607 aa10.33□□□□□ -0.76
SMCHD1-206ENST00000581631 CD2BP2O95400 341 aaKnown RBP10.32□□□□□ -0.76
SMCHD1-206ENST00000581631 HAP1P54257 671 aaPredicted RBP10.32□□□□□ -0.76
SMCHD1-206ENST00000581631 GRIPAP1Q4V328 841 aa10.31□□□□□ -0.76
SMCHD1-206ENST00000581631 LCE2AQ5TA79 106 aaPredicted RBP10.31□□□□□ -0.76
SMCHD1-206ENST00000581631 IRF6O14896 467 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms