RNA–Protein interactions for RNA: ENST00000581593.1

CDK12-206, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-206ENST00000581593 TMEM134Q9H6X4 195 aa9.24□□□□□ -0.93
CDK12-206ENST00000581593 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
CDK12-206ENST00000581593 PHOX2BQ99453 314 aa9.23□□□□□ -0.93
CDK12-206ENST00000581593 IRF6O14896 467 aa9.22□□□□□ -0.93
CDK12-206ENST00000581593 SLC4A3P48751 1232 aa9.22□□□□□ -0.93
CDK12-206ENST00000581593 SLF2Q8IX21 1173 aa9.22□□□□□ -0.93
CDK12-206ENST00000581593 CCDC102AQ96A19 550 aa9.22□□□□□ -0.93
CDK12-206ENST00000581593 MINK1Q8N4C8 1332 aaPredicted RBP9.21□□□□□ -0.94
CDK12-206ENST00000581593 ZMYND10O75800 440 aa9.2□□□□□ -0.94
CDK12-206ENST00000581593 BARGINQ6ZT62 677 aa9.19□□□□□ -0.94
CDK12-206ENST00000581593 MDM2Q00987 491 aaPredicted RBP9.17□□□□□ -0.94
CDK12-206ENST00000581593 PLA2G2EQ9NZK7 142 aa9.17□□□□□ -0.94
CDK12-206ENST00000581593 DDX11L8A8MPP1 907 aa9.16□□□□□ -0.94
CDK12-206ENST00000581593 APLP1P51693 650 aa9.16□□□□□ -0.94
CDK12-206ENST00000581593 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.94
CDK12-206ENST00000581593 RDH13Q8NBN7 331 aa9.15□□□□□ -0.94
CDK12-206ENST00000581593 DAXXQ9UER7 740 aaPredicted RBP9.15□□□□□ -0.94
CDK12-206ENST00000581593 CFHP08603 1231 aa9.14□□□□□ -0.95
CDK12-206ENST00000581593 SLC10A3P09131 477 aa9.14□□□□□ -0.95
CDK12-206ENST00000581593 NECTIN2Q92692 538 aa9.13□□□□□ -0.95
CDK12-206ENST00000581593 SLC24A3Q9HC58 644 aa9.12□□□□□ -0.95
CDK12-206ENST00000581593 COPS2P61201 443 aa9.11□□□□□ -0.95
CDK12-206ENST00000581593 TTLL12Q14166 644 aaPredicted RBP9.1□□□□□ -0.95
CDK12-206ENST00000581593 KMT5BQ4FZB7 885 aa9.1□□□□□ -0.95
CDK12-206ENST00000581593 RSPH4AQ5TD94 716 aa9.1□□□□□ -0.95
CDK12-206ENST00000581593 SULF1Q8IWU6 871 aa9.09□□□□□ -0.95
CDK12-206ENST00000581593 AK7Q96M32 723 aa9.09□□□□□ -0.95
CDK12-206ENST00000581593 MTRQ99707 1265 aa9.09□□□□□ -0.95
CDK12-206ENST00000581593 CLCN1P35523 988 aa9.08□□□□□ -0.96
CDK12-206ENST00000581593 PRR14Q9BWN1 585 aa9.08□□□□□ -0.96
CDK12-206ENST00000581593 GPCPD1Q9NPB8 672 aa9.08□□□□□ -0.96
CDK12-206ENST00000581593 PCDHB3Q9Y5E6 796 aa9.08□□□□□ -0.96
CDK12-206ENST00000581593 TRIM66O15016 1216 aa9.07□□□□□ -0.96
CDK12-206ENST00000581593 KCNC4Q03721 635 aa9.07□□□□□ -0.96
CDK12-206ENST00000581593 REPIN1Q9BWE0 567 aaKnown RBP9.07□□□□□ -0.96
CDK12-206ENST00000581593 ITGBL1O95965 494 aaPredicted RBP9.06□□□□□ -0.96
CDK12-206ENST00000581593 TJAP1Q5JTD0 557 aa9.06□□□□□ -0.96
CDK12-206ENST00000581593 BLOC1S3Q6QNY0 202 aa9.06□□□□□ -0.96
CDK12-206ENST00000581593 ZNF516Q92618 1163 aa9.06□□□□□ -0.96
CDK12-206ENST00000581593 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
CDK12-206ENST00000581593 PUS10Q3MIT2 529 aaKnown RBP9.05□□□□□ -0.96
CDK12-206ENST00000581593 IL21Q9HBE4 155 aa9.05□□□□□ -0.96
CDK12-206ENST00000581593 CD46P15529 392 aa9.03□□□□□ -0.96
CDK12-206ENST00000581593 GCGRP47871 477 aa9.03□□□□□ -0.96
CDK12-206ENST00000581593 FUT2Q10981 343 aa9.03□□□□□ -0.96
CDK12-206ENST00000581593 AMHR2Q16671 573 aa9.03□□□□□ -0.96
CDK12-206ENST00000581593 FAM217BQ9NTX9 383 aaPredicted RBP9.03□□□□□ -0.96
CDK12-206ENST00000581593 TPRNQ4KMQ1 711 aa9.02□□□□□ -0.97
CDK12-206ENST00000581593 GIGYF2Q6Y7W6 1299 aaKnown RBP9.02□□□□□ -0.97
CDK12-206ENST00000581593 PARP9Q8IXQ6 854 aa9.02□□□□□ -0.97
CDK12-206ENST00000581593 TMUB1Q9BVT8 246 aa9.02□□□□□ -0.97
CDK12-206ENST00000581593 SSTR3P32745 418 aaPredicted RBP9.01□□□□□ -0.97
CDK12-206ENST00000581593 NKX2-3Q8TAU0 364 aa9.01□□□□□ -0.97
CDK12-206ENST00000581593 TLL1O43897 1013 aa9□□□□□ -0.97
CDK12-206ENST00000581593 PDE4DQ08499 809 aa9□□□□□ -0.97
CDK12-206ENST00000581593 ZPR1O75312 459 aa8.99□□□□□ -0.97
CDK12-206ENST00000581593 KDM4AO75164 1064 aa8.98□□□□□ -0.97
CDK12-206ENST00000581593 NR1I2O75469 434 aa8.98□□□□□ -0.97
CDK12-206ENST00000581593 A0A0G2JS52 829 aa8.97□□□□□ -0.97
CDK12-206ENST00000581593 ATP6V1AP38606 617 aa8.97□□□□□ -0.97
CDK12-206ENST00000581593 IFFO2Q5TF58 517 aa8.96□□□□□ -0.98
CDK12-206ENST00000581593 NUTM1Q86Y26 1132 aa8.96□□□□□ -0.98
CDK12-206ENST00000581593 SCUBE3Q8IX30 993 aa8.96□□□□□ -0.98
CDK12-206ENST00000581593 HLA-CQ95604 372 aa8.96□□□□□ -0.98
CDK12-206ENST00000581593 MS4A1P11836 297 aa8.95□□□□□ -0.98
CDK12-206ENST00000581593 MORN1Q5T089 497 aa8.95□□□□□ -0.98
CDK12-206ENST00000581593 BEGAINQ9BUH8 593 aa8.95□□□□□ -0.98
CDK12-206ENST00000581593 SLC27A5Q9Y2P5 690 aa8.95□□□□□ -0.98
CDK12-206ENST00000581593 GRIPAP1Q4V328 841 aa8.94□□□□□ -0.98
CDK12-206ENST00000581593 GUCA2AQ02747 115 aa8.93□□□□□ -0.98
CDK12-206ENST00000581593 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
CDK12-206ENST00000581593 PPP1R18Q6NYC8 613 aa8.92□□□□□ -0.98
CDK12-206ENST00000581593 HOXA2O43364 376 aa8.91□□□□□ -0.98
CDK12-206ENST00000581593 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
CDK12-206ENST00000581593 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
CDK12-206ENST00000581593 SPSB2Q99619 263 aa8.91□□□□□ -0.98
CDK12-206ENST00000581593 S1PR4O95977 384 aa8.9□□□□□ -0.98
CDK12-206ENST00000581593 ADH1BP00325 375 aa8.9□□□□□ -0.98
CDK12-206ENST00000581593 USP46P62068 366 aa8.9□□□□□ -0.98
CDK12-206ENST00000581593 RNF19BQ6ZMZ0 732 aa8.9□□□□□ -0.98
CDK12-206ENST00000581593 NDUFV2P19404 249 aa8.89□□□□□ -0.99
CDK12-206ENST00000581593 FMNL1O95466 1100 aaPredicted RBP8.88□□□□□ -0.99
CDK12-206ENST00000581593 GGCXP38435 758 aa8.88□□□□□ -0.99
CDK12-206ENST00000581593 TBC1D2Q9BYX2 928 aa8.88□□□□□ -0.99
CDK12-206ENST00000581593 KDM4CQ9H3R0 1056 aa8.88□□□□□ -0.99
CDK12-206ENST00000581593 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.88□□□□□ -0.99
CDK12-206ENST00000581593 MOXD2PA6NHM9 499 aa8.87□□□□□ -0.99
CDK12-206ENST00000581593 PPEF1O14829 653 aaPredicted RBP8.87□□□□□ -0.99
CDK12-206ENST00000581593 THAP11Q96EK4 314 aa8.87□□□□□ -0.99
CDK12-206ENST00000581593 SLC6A16Q9GZN6 736 aa8.87□□□□□ -0.99
CDK12-206ENST00000581593 ABCC9O60706 1549 aa8.86□□□□□ -0.99
CDK12-206ENST00000581593 FDX1P10109 184 aa8.86□□□□□ -0.99
CDK12-206ENST00000581593 NEUROD2Q15784 382 aa8.86□□□□□ -0.99
CDK12-206ENST00000581593 Q3C1V9 767 aa8.86□□□□□ -0.99
CDK12-206ENST00000581593 BRICD5Q6PL45 260 aa8.86□□□□□ -0.99
CDK12-206ENST00000581593 SYMPKQ92797 1274 aaKnown RBP8.86□□□□□ -0.99
CDK12-206ENST00000581593 PRDM9Q9NQV7 894 aa8.86□□□□□ -0.99
CDK12-206ENST00000581593 RNF223E7ERA6 249 aa8.85□□□□□ -0.99
CDK12-206ENST00000581593 FAM160A2Q8N612 972 aaPredicted RBP8.84□□□□□ -0.99
CDK12-206ENST00000581593 PCDHGC3Q9UN70 934 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms