RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 RIMS2Q9UQ26 1411 aa17.61■□□□□ 0.41
ERBB2-210ENST00000580074 CHGAP10645 457 aaKnown RBP17.6■□□□□ 0.41
ERBB2-210ENST00000580074 PLEKHG1Q9ULL1 1385 aa17.6■□□□□ 0.41
ERBB2-210ENST00000580074 NAIPQ13075 1403 aa17.6■□□□□ 0.41
ERBB2-210ENST00000580074 NKTRP30414 1462 aaKnown RBP17.6■□□□□ 0.41
ERBB2-210ENST00000580074 DIP2AQ14689 1571 aa17.59■□□□□ 0.41
ERBB2-210ENST00000580074 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
ERBB2-210ENST00000580074 NWD1Q149M9 1564 aa17.58■□□□□ 0.41
ERBB2-210ENST00000580074 PIP4K2BP78356 416 aa17.58■□□□□ 0.4
ERBB2-210ENST00000580074 DISP3Q9P2K9 1392 aa17.56■□□□□ 0.4
ERBB2-210ENST00000580074 KCNA6P17658 529 aa17.56■□□□□ 0.4
ERBB2-210ENST00000580074 ACIN1Q9UKV3 1341 aaKnown RBP17.54■□□□□ 0.4
ERBB2-210ENST00000580074 TRPM2O94759 1503 aa17.54■□□□□ 0.4
ERBB2-210ENST00000580074 SLC26A8Q96RN1 970 aa17.53■□□□□ 0.4
ERBB2-210ENST00000580074 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
ERBB2-210ENST00000580074 PIK3R4Q99570 1358 aa17.52■□□□□ 0.39
ERBB2-210ENST00000580074 KIF1BO60333 1816 aa17.51■□□□□ 0.39
ERBB2-210ENST00000580074 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
ERBB2-210ENST00000580074 TMEM94Q12767 1356 aa17.51■□□□□ 0.39
ERBB2-210ENST00000580074 CHD2O14647 1828 aaKnown RBP17.5■□□□□ 0.39
ERBB2-210ENST00000580074 PROSER2Q86WR7 435 aaPredicted RBP17.5■□□□□ 0.39
ERBB2-210ENST00000580074 MSH6P52701 1360 aa17.5■□□□□ 0.39
ERBB2-210ENST00000580074 TBX22Q9Y458 520 aa17.49■□□□□ 0.39
ERBB2-210ENST00000580074 ALKQ9UM73 1620 aa17.48■□□□□ 0.39
ERBB2-210ENST00000580074 HSPA1LP34931 641 aa17.48■□□□□ 0.39
ERBB2-210ENST00000580074 ZNF326Q5BKZ1 582 aaKnown RBP17.48■□□□□ 0.39
ERBB2-210ENST00000580074 NCOA3Q9Y6Q9 1424 aa17.47■□□□□ 0.39
ERBB2-210ENST00000580074 CLTCL1P53675 1640 aa17.47■□□□□ 0.39
ERBB2-210ENST00000580074 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
ERBB2-210ENST00000580074 SETBP1Q9Y6X0 1596 aa17.45■□□□□ 0.38
ERBB2-210ENST00000580074 ADAMTS13Q76LX8 1427 aa17.44■□□□□ 0.38
ERBB2-210ENST00000580074 FAM135BQ49AJ0 1406 aa17.43■□□□□ 0.38
ERBB2-210ENST00000580074 C14orf37Q86TY3 774 aa17.42■□□□□ 0.38
ERBB2-210ENST00000580074 MED1Q15648 1581 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-210ENST00000580074 NUTM2DQ5VT03 806 aaPredicted RBP17.41■□□□□ 0.38
ERBB2-210ENST00000580074 NEXMIFQ5QGS0 1516 aa17.41■□□□□ 0.38
ERBB2-210ENST00000580074 SENP3Q9H4L4 574 aaPredicted RBP17.4■□□□□ 0.38
ERBB2-210ENST00000580074 ROBO1Q9Y6N7 1651 aa17.39■□□□□ 0.37
ERBB2-210ENST00000580074 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
ERBB2-210ENST00000580074 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
ERBB2-210ENST00000580074 RPGRIP1LQ68CZ1 1315 aa17.38■□□□□ 0.37
ERBB2-210ENST00000580074 VGFO15240 615 aaPredicted RBP17.37■□□□□ 0.37
ERBB2-210ENST00000580074 XRN1Q8IZH2 1706 aaKnown RBP17.37■□□□□ 0.37
ERBB2-210ENST00000580074 HRCP23327 699 aa17.36■□□□□ 0.37
ERBB2-210ENST00000580074 CADPS2Q86UW7 1296 aa17.36■□□□□ 0.37
ERBB2-210ENST00000580074 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
ERBB2-210ENST00000580074 DCCP43146 1447 aa17.36■□□□□ 0.37
ERBB2-210ENST00000580074 AMOTL2Q9Y2J4 779 aa17.35■□□□□ 0.37
ERBB2-210ENST00000580074 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
ERBB2-210ENST00000580074 ATF3P18847 181 aa17.34■□□□□ 0.37
ERBB2-210ENST00000580074 C19orf44Q9H6X5 657 aa17.34■□□□□ 0.37
ERBB2-210ENST00000580074 PPLO60437 1756 aa17.33■□□□□ 0.36
ERBB2-210ENST00000580074 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.33■□□□□ 0.36
ERBB2-210ENST00000580074 RBM33Q96EV2 1170 aaKnown RBP17.32■□□□□ 0.36
ERBB2-210ENST00000580074 SLAIN2Q9P270 581 aa17.32■□□□□ 0.36
ERBB2-210ENST00000580074 PHLPP1O60346 1717 aa17.31■□□□□ 0.36
ERBB2-210ENST00000580074 MPHOSPH9Q99550 1183 aa17.31■□□□□ 0.36
ERBB2-210ENST00000580074 PTPRUQ92729 1446 aa17.3■□□□□ 0.36
ERBB2-210ENST00000580074 ANKRD30BQ9BXX2 1392 aa17.29■□□□□ 0.36
ERBB2-210ENST00000580074 PTCH1Q13635 1447 aa17.29■□□□□ 0.36
ERBB2-210ENST00000580074 METP08581 1390 aa17.28■□□□□ 0.36
ERBB2-210ENST00000580074 ADGRL3Q9HAR2 1447 aa17.27■□□□□ 0.35
ERBB2-210ENST00000580074 SOCS7O14512 581 aa17.26■□□□□ 0.35
ERBB2-210ENST00000580074 PRAG1Q86YV5 1406 aa17.26■□□□□ 0.35
ERBB2-210ENST00000580074 SETD1AO15047 1707 aaKnown RBP17.26■□□□□ 0.35
ERBB2-210ENST00000580074 RAB3GAP2Q9H2M9 1393 aa17.26■□□□□ 0.35
ERBB2-210ENST00000580074 AHDC1Q5TGY3 1603 aaPredicted RBP17.25■□□□□ 0.35
ERBB2-210ENST00000580074 ILDR2Q71H61 639 aa17.25■□□□□ 0.35
ERBB2-210ENST00000580074 JCADQ9P266 1359 aa17.25■□□□□ 0.35
ERBB2-210ENST00000580074 IFT172Q9UG01 1749 aa17.24■□□□□ 0.35
ERBB2-210ENST00000580074 FOXD1Q16676 465 aa17.23■□□□□ 0.35
ERBB2-210ENST00000580074 SPATA31E1Q6ZUB1 1445 aa17.22■□□□□ 0.35
ERBB2-210ENST00000580074 COL16A1Q07092 1604 aaPredicted RBP17.22■□□□□ 0.35
ERBB2-210ENST00000580074 NALCNQ8IZF0 1738 aa17.22■□□□□ 0.35
ERBB2-210ENST00000580074 LAMC1P11047 1609 aa17.21■□□□□ 0.35
ERBB2-210ENST00000580074 ASXL1Q8IXJ9 1541 aa17.2■□□□□ 0.34
ERBB2-210ENST00000580074 RGL3Q3MIN7 710 aa17.19■□□□□ 0.34
ERBB2-210ENST00000580074 MST1RQ04912 1400 aa17.19■□□□□ 0.34
ERBB2-210ENST00000580074 SHPRHQ149N8 1683 aa17.19■□□□□ 0.34
ERBB2-210ENST00000580074 SPATA31A6Q5VVP1 1343 aa17.19■□□□□ 0.34
ERBB2-210ENST00000580074 MYOM2P54296 1465 aa17.18■□□□□ 0.34
ERBB2-210ENST00000580074 PIK3C2GO75747 1445 aa17.17■□□□□ 0.34
ERBB2-210ENST00000580074 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
ERBB2-210ENST00000580074 NHSL1Q5SYE7 1610 aa17.17■□□□□ 0.34
ERBB2-210ENST00000580074 BRINP3Q76B58 766 aa17.16■□□□□ 0.34
ERBB2-210ENST00000580074 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
ERBB2-210ENST00000580074 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
ERBB2-210ENST00000580074 TECPR2O15040 1411 aa17.14■□□□□ 0.33
ERBB2-210ENST00000580074 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
ERBB2-210ENST00000580074 LRPPRCP42704 1394 aaKnown RBP17.14■□□□□ 0.33
ERBB2-210ENST00000580074 MEX3CQ5U5Q3 659 aaKnown RBP17.13■□□□□ 0.33
ERBB2-210ENST00000580074 C1orf167Q5SNV9 1468 aa17.12■□□□□ 0.33
ERBB2-210ENST00000580074 STAC3Q96MF2 364 aa17.11■□□□□ 0.33
ERBB2-210ENST00000580074 ABCC11Q96J66 1382 aa17.11■□□□□ 0.33
ERBB2-210ENST00000580074 LRRC59Q96AG4 307 aaKnown RBP17.1■□□□□ 0.33
ERBB2-210ENST00000580074 DHX57Q6P158 1386 aaKnown RBP17.1■□□□□ 0.33
ERBB2-210ENST00000580074 NRXN1Q9ULB1 1477 aa17.1■□□□□ 0.33
ERBB2-210ENST00000580074 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
ERBB2-210ENST00000580074 STK26Q9P289 416 aa17.07■□□□□ 0.32
ERBB2-210ENST00000580074 C14orf93Q9H972 538 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms