RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 SLC26A8Q96RN1 970 aa25.55■■□□□ 1.68
CDC42EP4-204ENST00000579611 CHGAP10645 457 aaKnown RBP25.53■■□□□ 1.68
CDC42EP4-204ENST00000579611 PPP1R15AO75807 674 aaPredicted RBP25.51■■□□□ 1.67
CDC42EP4-204ENST00000579611 TBX22Q9Y458 520 aa25.51■■□□□ 1.67
CDC42EP4-204ENST00000579611 TRIM52Q96A61 297 aa25.48■■□□□ 1.67
CDC42EP4-204ENST00000579611 BCANQ96GW7 911 aa25.47■■□□□ 1.67
CDC42EP4-204ENST00000579611 ALKQ9UM73 1620 aa25.47■■□□□ 1.67
CDC42EP4-204ENST00000579611 MYO5BQ9ULV0 1848 aa25.45■■□□□ 1.66
CDC42EP4-204ENST00000579611 PIP4K2BP78356 416 aa25.45■■□□□ 1.66
CDC42EP4-204ENST00000579611 TRPM2O94759 1503 aa25.45■■□□□ 1.66
CDC42EP4-204ENST00000579611 SPHKAPQ2M3C7 1700 aa25.45■■□□□ 1.66
CDC42EP4-204ENST00000579611 SLC4A1APQ9BWU0 796 aaKnown RBP25.44■■□□□ 1.66
CDC42EP4-204ENST00000579611 NKTRP30414 1462 aaKnown RBP25.44■■□□□ 1.66
CDC42EP4-204ENST00000579611 ADAMTS13Q76LX8 1427 aa25.44■■□□□ 1.66
CDC42EP4-204ENST00000579611 TMEM94Q12767 1356 aa25.44■■□□□ 1.66
CDC42EP4-204ENST00000579611 ACIN1Q9UKV3 1341 aaKnown RBP25.43■■□□□ 1.66
CDC42EP4-204ENST00000579611 NWD1Q149M9 1564 aa25.43■■□□□ 1.66
CDC42EP4-204ENST00000579611 PIK3R4Q99570 1358 aa25.42■■□□□ 1.66
CDC42EP4-204ENST00000579611 NUTM2DQ5VT03 806 aaPredicted RBP25.4■■□□□ 1.66
CDC42EP4-204ENST00000579611 PROSER2Q86WR7 435 aaPredicted RBP25.4■■□□□ 1.66
CDC42EP4-204ENST00000579611 SCAF1Q9H7N4 1312 aaKnown RBP25.39■■□□□ 1.66
CDC42EP4-204ENST00000579611 HSPA1LP34931 641 aa25.39■■□□□ 1.66
CDC42EP4-204ENST00000579611 DIP2AQ14689 1571 aa25.38■■□□□ 1.65
CDC42EP4-204ENST00000579611 CLTCL1P53675 1640 aa25.37■■□□□ 1.65
CDC42EP4-204ENST00000579611 ZNF326Q5BKZ1 582 aaKnown RBP25.36■■□□□ 1.65
CDC42EP4-204ENST00000579611 NCOA3Q9Y6Q9 1424 aa25.35■■□□□ 1.65
CDC42EP4-204ENST00000579611 SENP3Q9H4L4 574 aaPredicted RBP25.34■■□□□ 1.65
CDC42EP4-204ENST00000579611 XIRP1Q702N8 1843 aaKnown RBP25.33■■□□□ 1.65
CDC42EP4-204ENST00000579611 MPHOSPH9Q99550 1183 aa25.33■■□□□ 1.65
CDC42EP4-204ENST00000579611 SETD5Q9C0A6 1442 aa25.32■■□□□ 1.64
CDC42EP4-204ENST00000579611 SETBP1Q9Y6X0 1596 aa25.31■■□□□ 1.64
CDC42EP4-204ENST00000579611 CHD2O14647 1828 aaKnown RBP25.31■■□□□ 1.64
CDC42EP4-204ENST00000579611 RPGRIP1LQ68CZ1 1315 aa25.31■■□□□ 1.64
CDC42EP4-204ENST00000579611 FAM135BQ49AJ0 1406 aa25.3■■□□□ 1.64
CDC42EP4-204ENST00000579611 NEXMIFQ5QGS0 1516 aa25.3■■□□□ 1.64
CDC42EP4-204ENST00000579611 RBM33Q96EV2 1170 aaKnown RBP25.29■■□□□ 1.64
CDC42EP4-204ENST00000579611 DISP3Q9P2K9 1392 aa25.29■■□□□ 1.64
CDC42EP4-204ENST00000579611 MSH6P52701 1360 aa25.28■■□□□ 1.64
CDC42EP4-204ENST00000579611 VGFO15240 615 aaPredicted RBP25.27■■□□□ 1.64
CDC42EP4-204ENST00000579611 AMOTL2Q9Y2J4 779 aa25.27■■□□□ 1.64
CDC42EP4-204ENST00000579611 FOXD1Q16676 465 aa25.26■■□□□ 1.63
CDC42EP4-204ENST00000579611 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
CDC42EP4-204ENST00000579611 NRXN3Q9Y4C0 1643 aa25.26■■□□□ 1.63
CDC42EP4-204ENST00000579611 KIF1BO60333 1816 aa25.23■■□□□ 1.63
CDC42EP4-204ENST00000579611 CCDC144AA2RUR9 1427 aa25.22■■□□□ 1.63
CDC42EP4-204ENST00000579611 METP08581 1390 aa25.22■■□□□ 1.63
CDC42EP4-204ENST00000579611 C19orf44Q9H6X5 657 aa25.22■■□□□ 1.63
CDC42EP4-204ENST00000579611 SLAIN2Q9P270 581 aa25.21■■□□□ 1.63
CDC42EP4-204ENST00000579611 RAB3GAP2Q9H2M9 1393 aa25.2■■□□□ 1.63
CDC42EP4-204ENST00000579611 HRCP23327 699 aa25.2■■□□□ 1.62
CDC42EP4-204ENST00000579611 SPATA31E1Q6ZUB1 1445 aa25.19■■□□□ 1.62
CDC42EP4-204ENST00000579611 CADPS2Q86UW7 1296 aa25.17■■□□□ 1.62
CDC42EP4-204ENST00000579611 XRN1Q8IZH2 1706 aaKnown RBP25.15■■□□□ 1.62
CDC42EP4-204ENST00000579611 C14orf37Q86TY3 774 aa25.15■■□□□ 1.62
CDC42EP4-204ENST00000579611 DCCP43146 1447 aa25.12■■□□□ 1.61
CDC42EP4-204ENST00000579611 PRAG1Q86YV5 1406 aa25.12■■□□□ 1.61
CDC42EP4-204ENST00000579611 ATF3P18847 181 aa25.12■■□□□ 1.61
CDC42EP4-204ENST00000579611 ANKRD30BQ9BXX2 1392 aa25.12■■□□□ 1.61
CDC42EP4-204ENST00000579611 ILDR2Q71H61 639 aa25.09■■□□□ 1.61
CDC42EP4-204ENST00000579611 ROBO1Q9Y6N7 1651 aa25.09■■□□□ 1.61
CDC42EP4-204ENST00000579611 RGL3Q3MIN7 710 aa25.08■■□□□ 1.61
CDC42EP4-204ENST00000579611 MED1Q15648 1581 aaPredicted RBP25.07■■□□□ 1.6
CDC42EP4-204ENST00000579611 PTCH1Q13635 1447 aa25.07■■□□□ 1.6
CDC42EP4-204ENST00000579611 PPLO60437 1756 aa25.07■■□□□ 1.6
CDC42EP4-204ENST00000579611 ADGRF5Q8IZF2 1346 aa25.07■■□□□ 1.6
CDC42EP4-204ENST00000579611 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.06■■□□□ 1.6
CDC42EP4-204ENST00000579611 ADGRL3Q9HAR2 1447 aa25.04■■□□□ 1.6
CDC42EP4-204ENST00000579611 SETD1AO15047 1707 aaKnown RBP25.04■■□□□ 1.6
CDC42EP4-204ENST00000579611 ROBO2Q9HCK4 1378 aa25.02■■□□□ 1.6
CDC42EP4-204ENST00000579611 PIK3C2GO75747 1445 aa25■■□□□ 1.59
CDC42EP4-204ENST00000579611 BRINP3Q76B58 766 aa24.99■■□□□ 1.59
CDC42EP4-204ENST00000579611 MST1RQ04912 1400 aa24.98■■□□□ 1.59
CDC42EP4-204ENST00000579611 NRXN1Q9ULB1 1477 aa24.96■■□□□ 1.59
CDC42EP4-204ENST00000579611 TECPR2O15040 1411 aa24.96■■□□□ 1.59
CDC42EP4-204ENST00000579611 IFT172Q9UG01 1749 aa24.96■■□□□ 1.59
CDC42EP4-204ENST00000579611 ABCC11Q96J66 1382 aa24.95■■□□□ 1.59
CDC42EP4-204ENST00000579611 JCADQ9P266 1359 aa24.95■■□□□ 1.59
CDC42EP4-204ENST00000579611 C14orf93Q9H972 538 aaKnown RBP24.95■■□□□ 1.58
CDC42EP4-204ENST00000579611 LRPPRCP42704 1394 aaKnown RBP24.94■■□□□ 1.58
CDC42EP4-204ENST00000579611 AHDC1Q5TGY3 1603 aaPredicted RBP24.94■■□□□ 1.58
CDC42EP4-204ENST00000579611 MYOM2P54296 1465 aa24.94■■□□□ 1.58
CDC42EP4-204ENST00000579611 SOCS7O14512 581 aa24.93■■□□□ 1.58
CDC42EP4-204ENST00000579611 PHF23Q9BUL5 403 aaPredicted RBP24.93■■□□□ 1.58
CDC42EP4-204ENST00000579611 COL16A1Q07092 1604 aaPredicted RBP24.91■■□□□ 1.58
CDC42EP4-204ENST00000579611 STAC3Q96MF2 364 aa24.91■■□□□ 1.58
CDC42EP4-204ENST00000579611 PHLPP1O60346 1717 aa24.9■■□□□ 1.58
CDC42EP4-204ENST00000579611 SIRT1Q96EB6 747 aa24.9■■□□□ 1.58
CDC42EP4-204ENST00000579611 TMEM132EQ6IEE7 984 aa24.89■■□□□ 1.58
CDC42EP4-204ENST00000579611 ASXL1Q8IXJ9 1541 aa24.89■■□□□ 1.57
CDC42EP4-204ENST00000579611 NALCNQ8IZF0 1738 aa24.89■■□□□ 1.57
CDC42EP4-204ENST00000579611 C1orf167Q5SNV9 1468 aa24.88■■□□□ 1.57
CDC42EP4-204ENST00000579611 SPATA31A6Q5VVP1 1343 aa24.86■■□□□ 1.57
CDC42EP4-204ENST00000579611 YTHDC2Q9H6S0 1430 aaKnown RBP24.86■■□□□ 1.57
CDC42EP4-204ENST00000579611 STK26Q9P289 416 aa24.86■■□□□ 1.57
CDC42EP4-204ENST00000579611 RGS17Q9UGC6 210 aaPredicted RBP24.86■■□□□ 1.57
CDC42EP4-204ENST00000579611 CFAP70Q5T0N1 1121 aa24.85■■□□□ 1.57
CDC42EP4-204ENST00000579611 WAPLQ7Z5K2 1190 aa24.83■■□□□ 1.57
CDC42EP4-204ENST00000579611 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
CDC42EP4-204ENST00000579611 LRRC59Q96AG4 307 aaKnown RBP24.81■■□□□ 1.56
CDC42EP4-204ENST00000579611 CDC42BPGQ6DT37 1551 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms