RNA–Protein interactions for RNA: ENST00000579205.5

MSI2-207, Transcript of musashi RNA binding protein 2, humanhuman

TSL 4

Gene MSI2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-207ENST00000579205 ABCF1Q8NE71 845 aaKnown RBP eCLIP21■□□□□ 0.95
MSI2-207ENST00000579205 SETD1BQ9UPS6 1966 aaKnown RBP20.99■□□□□ 0.95
MSI2-207ENST00000579205 UBR1Q8IWV7 1749 aa20.98■□□□□ 0.95
MSI2-207ENST00000579205 RALGAPBQ86X10 1494 aa20.98■□□□□ 0.95
MSI2-207ENST00000579205 NEXMIFQ5QGS0 1516 aa20.98■□□□□ 0.95
MSI2-207ENST00000579205 THEMISQ8N1K5 641 aaPredicted RBP20.97■□□□□ 0.95
MSI2-207ENST00000579205 CEP170BQ9Y4F5 1589 aaPredicted RBP20.97■□□□□ 0.95
MSI2-207ENST00000579205 ROCK2O75116 1388 aaKnown RBP20.97■□□□□ 0.95
MSI2-207ENST00000579205 RIMS2Q9UQ26 1411 aa20.96■□□□□ 0.95
MSI2-207ENST00000579205 NBPF8Q3BBV2 869 aa20.96■□□□□ 0.95
MSI2-207ENST00000579205 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
MSI2-207ENST00000579205 TRPM1Q7Z4N2 1603 aa20.94■□□□□ 0.94
MSI2-207ENST00000579205 ZNF142P52746 1687 aaPredicted RBP20.94■□□□□ 0.94
MSI2-207ENST00000579205 EID1Q9Y6B2 187 aa20.94■□□□□ 0.94
MSI2-207ENST00000579205 TMEM2Q9UHN6 1383 aa20.93■□□□□ 0.94
MSI2-207ENST00000579205 KIAA1210Q9ULL0 1709 aa20.92■□□□□ 0.94
MSI2-207ENST00000579205 CARD11Q9BXL7 1154 aa20.92■□□□□ 0.94
MSI2-207ENST00000579205 NRXN1Q9ULB1 1477 aa20.92■□□□□ 0.94
MSI2-207ENST00000579205 LAMC1P11047 1609 aa20.92■□□□□ 0.94
MSI2-207ENST00000579205 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
MSI2-207ENST00000579205 EIF4G2P78344 907 aaKnown RBP eCLIP20.9■□□□□ 0.941e-6■■■■■ 30.9
MSI2-207ENST00000579205 NUTM2DQ5VT03 806 aaPredicted RBP20.9■□□□□ 0.94
MSI2-207ENST00000579205 PIK3C2GO75747 1445 aa20.89■□□□□ 0.94
MSI2-207ENST00000579205 BCANQ96GW7 911 aa20.89■□□□□ 0.93
MSI2-207ENST00000579205 SLIT1O75093 1534 aa20.87■□□□□ 0.93
MSI2-207ENST00000579205 KDM4FA0A1W2PPD8 638 aa20.86■□□□□ 0.93
MSI2-207ENST00000579205 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
MSI2-207ENST00000579205 TXNDC2Q86VQ3 553 aa20.85■□□□□ 0.93
MSI2-207ENST00000579205 EIF3AQ14152 1382 aaKnown RBP20.85■□□□□ 0.93
MSI2-207ENST00000579205 GPRASP1Q5JY77 1395 aa20.85■□□□□ 0.93
MSI2-207ENST00000579205 USP47Q96K76 1375 aa20.85■□□□□ 0.93
MSI2-207ENST00000579205 ARHGAP23Q9P227 1491 aa20.83■□□□□ 0.93
MSI2-207ENST00000579205 CFAP70Q5T0N1 1121 aa20.83■□□□□ 0.93
MSI2-207ENST00000579205 C14orf93Q9H972 538 aaKnown RBP20.83■□□□□ 0.93
MSI2-207ENST00000579205 SETBP1Q9Y6X0 1596 aa20.83■□□□□ 0.92
MSI2-207ENST00000579205 SCAF11Q99590 1463 aaKnown RBP20.82■□□□□ 0.92
MSI2-207ENST00000579205 ANKLE2Q86XL3 938 aa20.81■□□□□ 0.92
MSI2-207ENST00000579205 PLEKHG1Q9ULL1 1385 aa20.81■□□□□ 0.92
MSI2-207ENST00000579205 HSPA5P11021 654 aaKnown RBP20.8■□□□□ 0.92
MSI2-207ENST00000579205 NBPF1Q3BBV0 1214 aa20.8■□□□□ 0.92
MSI2-207ENST00000579205 SENP3Q9H4L4 574 aaPredicted RBP20.77■□□□□ 0.92
MSI2-207ENST00000579205 ALKQ9UM73 1620 aa20.77■□□□□ 0.92
MSI2-207ENST00000579205 IQGAP1P46940 1657 aa20.75■□□□□ 0.91
MSI2-207ENST00000579205 LTKP29376 864 aa20.75■□□□□ 0.91
MSI2-207ENST00000579205 DIP2AQ14689 1571 aa20.74■□□□□ 0.91
MSI2-207ENST00000579205 POLR1AO95602 1720 aaPredicted RBP20.73■□□□□ 0.91
MSI2-207ENST00000579205 SLC24A1O60721 1099 aa20.72■□□□□ 0.91
MSI2-207ENST00000579205 ADGRB1O14514 1584 aa20.72■□□□□ 0.91
MSI2-207ENST00000579205 TMEM132EQ6IEE7 984 aa20.71■□□□□ 0.91
MSI2-207ENST00000579205 HIRIP3Q9BW71 556 aaPredicted RBP20.71■□□□□ 0.91
MSI2-207ENST00000579205 NRXN3Q9Y4C0 1643 aa20.7■□□□□ 0.9
MSI2-207ENST00000579205 ST20-MTHFSA0A0A6YYL1 179 aa20.69■□□□□ 0.9
MSI2-207ENST00000579205 YTHDC2Q9H6S0 1430 aaKnown RBP20.69■□□□□ 0.9
MSI2-207ENST00000579205 STK26Q9P289 416 aa20.68■□□□□ 0.9
MSI2-207ENST00000579205 TRAK1Q9UPV9 953 aa20.68■□□□□ 0.9
MSI2-207ENST00000579205 TBX22Q9Y458 520 aa20.67■□□□□ 0.9
MSI2-207ENST00000579205 NPHP4O75161 1426 aaPredicted RBP20.67■□□□□ 0.9
MSI2-207ENST00000579205 SETD1AO15047 1707 aaKnown RBP20.67■□□□□ 0.9
MSI2-207ENST00000579205 CENPJQ9HC77 1338 aaPredicted RBP20.66■□□□□ 0.9
MSI2-207ENST00000579205 LRPPRCP42704 1394 aaKnown RBP20.66■□□□□ 0.9
MSI2-207ENST00000579205 ADAMTS13Q76LX8 1427 aa20.66■□□□□ 0.9
MSI2-207ENST00000579205 ASXL1Q8IXJ9 1541 aa20.65■□□□□ 0.9
MSI2-207ENST00000579205 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
MSI2-207ENST00000579205 POGKQ9P215 609 aa20.65■□□□□ 0.9
MSI2-207ENST00000579205 LMTK3Q96Q04 1460 aa20.64■□□□□ 0.89
MSI2-207ENST00000579205 TMF1P82094 1093 aa20.64■□□□□ 0.89
MSI2-207ENST00000579205 CDCA8Q53HL2 280 aa20.64■□□□□ 0.89
MSI2-207ENST00000579205 MED14O60244 1454 aa20.63■□□□□ 0.89
MSI2-207ENST00000579205 PIK3R4Q99570 1358 aa20.63■□□□□ 0.89
MSI2-207ENST00000579205 ARHGEF28Q8N1W1 1705 aaKnown RBP20.62■□□□□ 0.89
MSI2-207ENST00000579205 NCKAP5LQ9HCH0 1330 aa20.62■□□□□ 0.89
MSI2-207ENST00000579205 DLC1Q96QB1 1528 aa20.62■□□□□ 0.89
MSI2-207ENST00000579205 METP08581 1390 aa20.61■□□□□ 0.89
MSI2-207ENST00000579205 KNDC1Q76NI1 1749 aa20.61■□□□□ 0.89
MSI2-207ENST00000579205 ABCC11Q96J66 1382 aa20.6■□□□□ 0.89
MSI2-207ENST00000579205 HSPA2P54652 639 aa20.6■□□□□ 0.89
MSI2-207ENST00000579205 QRICH2Q9H0J4 1663 aa20.6■□□□□ 0.89
MSI2-207ENST00000579205 SBNO2Q9Y2G9 1366 aa20.59■□□□□ 0.89
MSI2-207ENST00000579205 POLR3GLQ9BT43 218 aa20.59■□□□□ 0.89
MSI2-207ENST00000579205 TECPR2O15040 1411 aa20.57■□□□□ 0.88
MSI2-207ENST00000579205 PRAM1Q96QH2 718 aa20.57■□□□□ 0.88
MSI2-207ENST00000579205 CPS1P31327 1500 aa20.57■□□□□ 0.88
MSI2-207ENST00000579205 CCDC7Q96M83 1385 aa20.57■□□□□ 0.88
MSI2-207ENST00000579205 SIRT1Q96EB6 747 aa20.56■□□□□ 0.88
MSI2-207ENST00000579205 FAM135BQ49AJ0 1406 aa20.55■□□□□ 0.88
MSI2-207ENST00000579205 TESK2Q96S53 571 aa20.55■□□□□ 0.88
MSI2-207ENST00000579205 KIF7Q2M1P5 1343 aa20.54■□□□□ 0.88
MSI2-207ENST00000579205 SAFB2Q14151 953 aaKnown RBP eCLIP20.54■□□□□ 0.882e-6■■■■□ 20
MSI2-207ENST00000579205 AMOTL2Q9Y2J4 779 aa20.54■□□□□ 0.88
MSI2-207ENST00000579205 EVC2Q86UK5 1308 aa20.53■□□□□ 0.88
MSI2-207ENST00000579205 PTCH1Q13635 1447 aa20.53■□□□□ 0.88
MSI2-207ENST00000579205 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
MSI2-207ENST00000579205 DIEXFQ68CQ4 756 aaKnown RBP20.52■□□□□ 0.88
MSI2-207ENST00000579205 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
MSI2-207ENST00000579205 XRN1Q8IZH2 1706 aaKnown RBP20.5■□□□□ 0.87
MSI2-207ENST00000579205 DISP3Q9P2K9 1392 aa20.5■□□□□ 0.87
MSI2-207ENST00000579205 CHD2O14647 1828 aaKnown RBP20.49■□□□□ 0.87
MSI2-207ENST00000579205 DDX10Q13206 875 aaKnown RBP20.49■□□□□ 0.87
MSI2-207ENST00000579205 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
MSI2-207ENST00000579205 MINK1Q8N4C8 1332 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms