RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 ZFYVE9O95405 1425 aa29.7■■■□□ 2.34
CDKN2A-213ENST00000579122 BCANQ96GW7 911 aa29.69■■■□□ 2.34
CDKN2A-213ENST00000579122 PLEKHG1Q9ULL1 1385 aa29.67■■■□□ 2.34
CDKN2A-213ENST00000579122 UNC13BO14795 1591 aa29.66■■■□□ 2.34
CDKN2A-213ENST00000579122 HDGFP51858 240 aaKnown RBP29.66■■■□□ 2.34
CDKN2A-213ENST00000579122 RBM33Q96EV2 1170 aaKnown RBP29.66■■■□□ 2.34
CDKN2A-213ENST00000579122 GCC2Q8IWJ2 1684 aa29.66■■■□□ 2.34
CDKN2A-213ENST00000579122 RIMS2Q9UQ26 1411 aa29.65■■■□□ 2.34
CDKN2A-213ENST00000579122 TMEM131LA2VDJ0 1609 aa29.64■■■□□ 2.34
CDKN2A-213ENST00000579122 ROBO1Q9Y6N7 1651 aa29.64■■■□□ 2.34
CDKN2A-213ENST00000579122 RGS17Q9UGC6 210 aaPredicted RBP29.63■■■□□ 2.33
CDKN2A-213ENST00000579122 MSH6P52701 1360 aa29.63■■■□□ 2.33
CDKN2A-213ENST00000579122 MYO5BQ9ULV0 1848 aa29.62■■■□□ 2.33
CDKN2A-213ENST00000579122 PPP1R15AO75807 674 aaPredicted RBP29.62■■■□□ 2.33
CDKN2A-213ENST00000579122 ROCK1Q13464 1354 aa29.62■■■□□ 2.33
CDKN2A-213ENST00000579122 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.59■■■□□ 2.33
CDKN2A-213ENST00000579122 CHD2O14647 1828 aaKnown RBP29.58■■■□□ 2.33
CDKN2A-213ENST00000579122 TBX22Q9Y458 520 aa29.57■■■□□ 2.32
CDKN2A-213ENST00000579122 E9PCH4 1651 aa29.56■■■□□ 2.32
CDKN2A-213ENST00000579122 SLAIN2Q9P270 581 aa29.55■■■□□ 2.32
CDKN2A-213ENST00000579122 IQGAP3Q86VI3 1631 aa29.55■■■□□ 2.32
CDKN2A-213ENST00000579122 CHGAP10645 457 aaKnown RBP29.54■■■□□ 2.32
CDKN2A-213ENST00000579122 NCOA3Q9Y6Q9 1424 aa29.53■■■□□ 2.32
CDKN2A-213ENST00000579122 ADAMTS13Q76LX8 1427 aa29.5■■■□□ 2.31
CDKN2A-213ENST00000579122 DIP2AQ14689 1571 aa29.49■■■□□ 2.31
CDKN2A-213ENST00000579122 NUP155O75694 1391 aa29.48■■■□□ 2.31
CDKN2A-213ENST00000579122 PIK3R4Q99570 1358 aa29.48■■■□□ 2.31
CDKN2A-213ENST00000579122 PHLPP1O60346 1717 aa29.46■■■□□ 2.31
CDKN2A-213ENST00000579122 NUTM2DQ5VT03 806 aaPredicted RBP29.45■■■□□ 2.31
CDKN2A-213ENST00000579122 JCADQ9P266 1359 aa29.44■■■□□ 2.3
CDKN2A-213ENST00000579122 POTEAQ6S8J7 498 aa29.44■■■□□ 2.3
CDKN2A-213ENST00000579122 C14orf37Q86TY3 774 aa29.42■■■□□ 2.3
CDKN2A-213ENST00000579122 ITGAEP38570 1179 aa29.4■■■□□ 2.3
CDKN2A-213ENST00000579122 TRPM2O94759 1503 aa29.4■■■□□ 2.3
CDKN2A-213ENST00000579122 CADPS2Q86UW7 1296 aa29.39■■■□□ 2.3
CDKN2A-213ENST00000579122 C19orf44Q9H6X5 657 aa29.39■■■□□ 2.3
CDKN2A-213ENST00000579122 COL16A1Q07092 1604 aaPredicted RBP29.38■■■□□ 2.29
CDKN2A-213ENST00000579122 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.37■■■□□ 2.29
CDKN2A-213ENST00000579122 ATF3P18847 181 aa29.35■■■□□ 2.29
CDKN2A-213ENST00000579122 AMOTL2Q9Y2J4 779 aa29.35■■■□□ 2.29
CDKN2A-213ENST00000579122 PTPRUQ92729 1446 aa29.34■■■□□ 2.29
CDKN2A-213ENST00000579122 AHDC1Q5TGY3 1603 aaPredicted RBP29.31■■■□□ 2.28
CDKN2A-213ENST00000579122 SPHKAPQ2M3C7 1700 aa29.31■■■□□ 2.28
CDKN2A-213ENST00000579122 SPATA31A6Q5VVP1 1343 aa29.3■■■□□ 2.28
CDKN2A-213ENST00000579122 SETBP1Q9Y6X0 1596 aa29.3■■■□□ 2.28
CDKN2A-213ENST00000579122 NRXN3Q9Y4C0 1643 aa29.28■■■□□ 2.28
CDKN2A-213ENST00000579122 PPARGC1BQ86YN6 1023 aaKnown RBP29.28■■■□□ 2.28
CDKN2A-213ENST00000579122 DCCP43146 1447 aa29.27■■■□□ 2.28
CDKN2A-213ENST00000579122 XRN1Q8IZH2 1706 aaKnown RBP29.25■■■□□ 2.27
CDKN2A-213ENST00000579122 LRP6O75581 1613 aa29.25■■■□□ 2.27
CDKN2A-213ENST00000579122 ZNF326Q5BKZ1 582 aaKnown RBP29.25■■■□□ 2.27
CDKN2A-213ENST00000579122 BRINP3Q76B58 766 aa29.24■■■□□ 2.27
CDKN2A-213ENST00000579122 SHPRHQ149N8 1683 aa29.23■■■□□ 2.27
CDKN2A-213ENST00000579122 MEX3CQ5U5Q3 659 aaKnown RBP29.2■■■□□ 2.26
CDKN2A-213ENST00000579122 METP08581 1390 aa29.19■■■□□ 2.26
CDKN2A-213ENST00000579122 ZNF772Q68DY9 489 aaPredicted RBP29.18■■■□□ 2.26
CDKN2A-213ENST00000579122 CLTCL1P53675 1640 aa29.18■■■□□ 2.26
CDKN2A-213ENST00000579122 NEXMIFQ5QGS0 1516 aa29.17■■■□□ 2.26
CDKN2A-213ENST00000579122 ASXL1Q8IXJ9 1541 aa29.16■■■□□ 2.26
CDKN2A-213ENST00000579122 MST1RQ04912 1400 aa29.16■■■□□ 2.26
CDKN2A-213ENST00000579122 RRBP1Q9P2E9 1410 aaKnown RBP29.16■■■□□ 2.26
CDKN2A-213ENST00000579122 SETD1AO15047 1707 aaKnown RBP29.15■■■□□ 2.26
CDKN2A-213ENST00000579122 NAIPQ13075 1403 aa29.14■■■□□ 2.26
CDKN2A-213ENST00000579122 SETD5Q9C0A6 1442 aa29.11■■■□□ 2.25
CDKN2A-213ENST00000579122 ADGRL3Q9HAR2 1447 aa29.11■■■□□ 2.25
CDKN2A-213ENST00000579122 NHSL1Q5SYE7 1610 aa29.1■■■□□ 2.25
CDKN2A-213ENST00000579122 KIF1BO60333 1816 aa29.09■■■□□ 2.25
CDKN2A-213ENST00000579122 NUTM2BA6NNL0 878 aaPredicted RBP29.06■■■□□ 2.24
CDKN2A-213ENST00000579122 NUTM2EB1AL46 878 aaPredicted RBP29.06■■■□□ 2.24
CDKN2A-213ENST00000579122 NUTM2AQ8IVF1 878 aaPredicted RBP29.06■■■□□ 2.24
CDKN2A-213ENST00000579122 LRRC59Q96AG4 307 aaKnown RBP29.06■■■□□ 2.24
CDKN2A-213ENST00000579122 NALCNQ8IZF0 1738 aa29.05■■■□□ 2.24
CDKN2A-213ENST00000579122 VGFO15240 615 aaPredicted RBP29.03■■■□□ 2.24
CDKN2A-213ENST00000579122 RXRBP28702 533 aa29.02■■■□□ 2.24
CDKN2A-213ENST00000579122 PTCH1Q13635 1447 aa29.02■■■□□ 2.24
CDKN2A-213ENST00000579122 TRIM52Q96A61 297 aa29.01■■■□□ 2.23
CDKN2A-213ENST00000579122 HFM1A2PYH4 1435 aa29.01■■■□□ 2.23
CDKN2A-213ENST00000579122 RPGRIP1LQ68CZ1 1315 aa28.99■■■□□ 2.23
CDKN2A-213ENST00000579122 AFF2P51816 1311 aa28.98■■■□□ 2.23
CDKN2A-213ENST00000579122 PNPLA6Q8IY17 1366 aa28.98■■■□□ 2.23
CDKN2A-213ENST00000579122 C1orf167Q5SNV9 1468 aa28.97■■■□□ 2.23
CDKN2A-213ENST00000579122 CDK12Q9NYV4 1490 aaPredicted RBP28.97■■■□□ 2.23
CDKN2A-213ENST00000579122 PRAG1Q86YV5 1406 aa28.97■■■□□ 2.23
CDKN2A-213ENST00000579122 DDX17Q92841 729 aaKnown RBP28.97■■■□□ 2.23
CDKN2A-213ENST00000579122 UPF1Q92900 1129 aaKnown RBP eCLIP28.96■■■□□ 2.23
CDKN2A-213ENST00000579122 SLC4A1APQ9BWU0 796 aaKnown RBP28.96■■■□□ 2.23
CDKN2A-213ENST00000579122 ROBO2Q9HCK4 1378 aa28.96■■■□□ 2.23
CDKN2A-213ENST00000579122 LAMC1P11047 1609 aa28.93■■■□□ 2.22
CDKN2A-213ENST00000579122 C8orf37Q96NL8 207 aa28.9■■■□□ 2.22
CDKN2A-213ENST00000579122 PPLO60437 1756 aa28.89■■■□□ 2.22
CDKN2A-213ENST00000579122 SOS2Q07890 1332 aaPredicted RBP28.88■■■□□ 2.21
CDKN2A-213ENST00000579122 ORAI2Q96SN7 254 aa28.87■■■□□ 2.21
CDKN2A-213ENST00000579122 QTRT2Q9H974 415 aaKnown RBP28.85■■■□□ 2.21
CDKN2A-213ENST00000579122 RBM6P78332 1123 aaKnown RBP28.84■■■□□ 2.21
CDKN2A-213ENST00000579122 ADAMTS2O95450 1211 aa28.81■■■□□ 2.2
CDKN2A-213ENST00000579122 NGLY1Q96IV0 654 aa28.81■■■□□ 2.2
CDKN2A-213ENST00000579122 RGS12O14924 1447 aa28.8■■■□□ 2.2
CDKN2A-213ENST00000579122 FOXD1Q16676 465 aa28.79■■■□□ 2.2
CDKN2A-213ENST00000579122 CDC42BPGQ6DT37 1551 aa28.79■■■□□ 2.2
CDKN2A-213ENST00000579122 CCDC144AA2RUR9 1427 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms