RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 EVC2Q86UK5 1308 aa14.99□□□□□ -0.01
ERBB2-206ENST00000578373 NGDNQ8NEJ9 315 aaKnown RBP14.98□□□□□ -0.01
ERBB2-206ENST00000578373 DIAPH1O60610 1272 aaKnown RBP14.97□□□□□ -0.01
ERBB2-206ENST00000578373 AMPHP49418 695 aa14.97□□□□□ -0.01
ERBB2-206ENST00000578373 CCDC9Q9Y3X0 531 aaKnown RBP14.97□□□□□ -0.01
ERBB2-206ENST00000578373 C22orf23Q9BZE7 217 aa14.97□□□□□ -0.01
ERBB2-206ENST00000578373 VGFO15240 615 aaPredicted RBP14.97□□□□□ -0.01
ERBB2-206ENST00000578373 POLA1P09884 1462 aaPredicted RBP14.97□□□□□ -0.01
ERBB2-206ENST00000578373 C1orf115Q9H7X2 142 aa14.96□□□□□ -0.01
ERBB2-206ENST00000578373 DDX19BQ9UMR2 479 aa14.96□□□□□ -0.01
ERBB2-206ENST00000578373 PDZRN3Q9UPQ7 1066 aa14.96□□□□□ -0.01
ERBB2-206ENST00000578373 EXOSC9Q06265 439 aaKnown RBP14.95□□□□□ -0.02
ERBB2-206ENST00000578373 KIAA1107Q9UPP5 1409 aa14.95□□□□□ -0.02
ERBB2-206ENST00000578373 CDK13Q14004 1512 aaKnown RBP14.95□□□□□ -0.02
ERBB2-206ENST00000578373 HMMRO75330 724 aa14.95□□□□□ -0.02
ERBB2-206ENST00000578373 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
ERBB2-206ENST00000578373 SMG6Q86US8 1419 aaKnown RBP14.94□□□□□ -0.02
ERBB2-206ENST00000578373 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
ERBB2-206ENST00000578373 MIA2Q96PC5 1412 aa14.93□□□□□ -0.02
ERBB2-206ENST00000578373 TULP1O00294 542 aaPredicted RBP14.93□□□□□ -0.02
ERBB2-206ENST00000578373 CHMP5Q9NZZ3 219 aa14.93□□□□□ -0.02
ERBB2-206ENST00000578373 ST18O60284 1047 aa14.93□□□□□ -0.02
ERBB2-206ENST00000578373 DDX11L8A8MPP1 907 aa14.92□□□□□ -0.02
ERBB2-206ENST00000578373 COG3Q96JB2 828 aa14.92□□□□□ -0.02
ERBB2-206ENST00000578373 CHMP3Q9Y3E7 222 aa14.92□□□□□ -0.02
ERBB2-206ENST00000578373 ANKRD30BQ9BXX2 1392 aa14.91□□□□□ -0.02
ERBB2-206ENST00000578373 EIF2S2P20042 333 aaKnown RBP14.91□□□□□ -0.02
ERBB2-206ENST00000578373 TRHP20396 242 aaPredicted RBP14.91□□□□□ -0.02
ERBB2-206ENST00000578373 KIAA2012Q0VF49 1180 aa14.91□□□□□ -0.02
ERBB2-206ENST00000578373 TOPBP1Q92547 1522 aa14.9□□□□□ -0.02
ERBB2-206ENST00000578373 DAPK1P53355 1430 aa14.9□□□□□ -0.02
ERBB2-206ENST00000578373 CHAF1AQ13111 956 aaPredicted RBP14.89□□□□□ -0.03
ERBB2-206ENST00000578373 PCF11O94913 1555 aaKnown RBP14.89□□□□□ -0.03
ERBB2-206ENST00000578373 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.89□□□□□ -0.03
ERBB2-206ENST00000578373 HMGXB3Q12766 1538 aa14.89□□□□□ -0.03
ERBB2-206ENST00000578373 C9orf84Q5VXU9 1444 aa14.89□□□□□ -0.03
ERBB2-206ENST00000578373 LMOD3Q0VAK6 560 aa14.89□□□□□ -0.03
ERBB2-206ENST00000578373 CYB5RLQ6IPT4 315 aa14.89□□□□□ -0.03
ERBB2-206ENST00000578373 CDK11BP21127 795 aaKnown RBP14.89□□□□□ -0.03
ERBB2-206ENST00000578373 PTPRKQ15262 1439 aa14.88□□□□□ -0.03
ERBB2-206ENST00000578373 CSB-PGBD3P0DP91 1061 aa14.88□□□□□ -0.03
ERBB2-206ENST00000578373 CFAP44Q96MT7 982 aa14.88□□□□□ -0.03
ERBB2-206ENST00000578373 ZNF428Q96B54 188 aa14.88□□□□□ -0.03
ERBB2-206ENST00000578373 HSP90AA2PQ14568 343 aaPredicted RBP14.87□□□□□ -0.03
ERBB2-206ENST00000578373 NGEFQ8N5V2 710 aa14.87□□□□□ -0.03
ERBB2-206ENST00000578373 ANO2Q9NQ90 1003 aa14.87□□□□□ -0.03
ERBB2-206ENST00000578373 NUTM2GQ5VZR2 741 aa14.87□□□□□ -0.03
ERBB2-206ENST00000578373 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
ERBB2-206ENST00000578373 VSIG10Q8N0Z9 540 aa14.86□□□□□ -0.03
ERBB2-206ENST00000578373 MCTP1Q6DN14 999 aa14.85□□□□□ -0.03
ERBB2-206ENST00000578373 MAPKBP1O60336 1514 aa14.85□□□□□ -0.03
ERBB2-206ENST00000578373 TRAK2O60296 914 aa14.85□□□□□ -0.03
ERBB2-206ENST00000578373 FKBP5Q13451 457 aaPredicted RBP14.85□□□□□ -0.03
ERBB2-206ENST00000578373 NOB1Q9ULX3 412 aaKnown RBP14.85□□□□□ -0.03
ERBB2-206ENST00000578373 RNF214Q8ND24 703 aa14.84□□□□□ -0.03
ERBB2-206ENST00000578373 SYAP1Q96A49 352 aaPredicted RBP14.84□□□□□ -0.03
ERBB2-206ENST00000578373 RSPH6AQ9H0K4 717 aa14.83□□□□□ -0.04
ERBB2-206ENST00000578373 TROQ12816 1431 aaPredicted RBP14.83□□□□□ -0.04
ERBB2-206ENST00000578373 EPRSP07814 1512 aaKnown RBP14.83□□□□□ -0.04
ERBB2-206ENST00000578373 NPHP1O15259 732 aa14.83□□□□□ -0.04
ERBB2-206ENST00000578373 HSP90B1P14625 803 aaKnown RBP14.83□□□□□ -0.04
ERBB2-206ENST00000578373 PTMSP20962 102 aa14.83□□□□□ -0.04
ERBB2-206ENST00000578373 PDE3AQ14432 1141 aa14.83□□□□□ -0.04
ERBB2-206ENST00000578373 EHBP1L1Q8N3D4 1523 aa14.83□□□□□ -0.04
ERBB2-206ENST00000578373 GRIN2BQ13224 1484 aa14.83□□□□□ -0.04
ERBB2-206ENST00000578373 MPNDQ8N594 471 aa14.82□□□□□ -0.04
ERBB2-206ENST00000578373 THUMPD2Q9BTF0 503 aaKnown RBP14.82□□□□□ -0.04
ERBB2-206ENST00000578373 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.82□□□□□ -0.04
ERBB2-206ENST00000578373 SLFN5Q08AF3 891 aa14.82□□□□□ -0.04
ERBB2-206ENST00000578373 BCL11BQ9C0K0 894 aaPredicted RBP14.82□□□□□ -0.04
ERBB2-206ENST00000578373 KIF16BQ96L93 1317 aa14.82□□□□□ -0.04
ERBB2-206ENST00000578373 EFCAB5A4FU69 1503 aa14.82□□□□□ -0.04
ERBB2-206ENST00000578373 NCOA1Q15788 1441 aa14.81□□□□□ -0.04
ERBB2-206ENST00000578373 WWC1Q8IX03 1113 aa14.81□□□□□ -0.04
ERBB2-206ENST00000578373 API5Q9BZZ5 524 aaKnown RBP14.81□□□□□ -0.04
ERBB2-206ENST00000578373 ABCC5O15440 1437 aa14.81□□□□□ -0.04
ERBB2-206ENST00000578373 ERBINQ96RT1 1412 aa14.81□□□□□ -0.04
ERBB2-206ENST00000578373 GNL2Q13823 731 aaKnown RBP14.8□□□□□ -0.04
ERBB2-206ENST00000578373 PRAM1Q96QH2 718 aa14.8□□□□□ -0.04
ERBB2-206ENST00000578373 ARHGAP5Q13017 1502 aa14.8□□□□□ -0.04
ERBB2-206ENST00000578373 FAM13BQ9NYF5 915 aa14.8□□□□□ -0.04
ERBB2-206ENST00000578373 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.8□□□□□ -0.04
ERBB2-206ENST00000578373 GORABQ5T7V8 394 aa14.79□□□□□ -0.04
ERBB2-206ENST00000578373 GNAI1P63096 354 aa14.79□□□□□ -0.04
ERBB2-206ENST00000578373 REC8O95072 547 aa14.78□□□□□ -0.04
ERBB2-206ENST00000578373 CABP1Q9NZU7 370 aa14.78□□□□□ -0.04
ERBB2-206ENST00000578373 TSPYL4Q9UJ04 414 aa14.78□□□□□ -0.04
ERBB2-206ENST00000578373 GOLGA6L6A8MZA4 724 aa14.78□□□□□ -0.04
ERBB2-206ENST00000578373 SKOR2Q2VWA4 1001 aaPredicted RBP14.78□□□□□ -0.04
ERBB2-206ENST00000578373 NRDCO43847 1150 aa14.78□□□□□ -0.04
ERBB2-206ENST00000578373 SCAPERQ9BY12 1400 aa14.77□□□□□ -0.04
ERBB2-206ENST00000578373 CAVIN1Q6NZI2 390 aaKnown RBP14.77□□□□□ -0.04
ERBB2-206ENST00000578373 TEFQ10587 303 aa14.77□□□□□ -0.05
ERBB2-206ENST00000578373 EID1Q9Y6B2 187 aa14.77□□□□□ -0.05
ERBB2-206ENST00000578373 PLB1Q6P1J6 1458 aa14.76□□□□□ -0.05
ERBB2-206ENST00000578373 DUSP27Q5VZP5 1158 aa14.76□□□□□ -0.05
ERBB2-206ENST00000578373 ATF7IPQ6VMQ6 1270 aa14.76□□□□□ -0.05
ERBB2-206ENST00000578373 VPS37CA5D8V6 355 aaPredicted RBP14.75□□□□□ -0.05
ERBB2-206ENST00000578373 TWISTNBQ3B726 338 aaPredicted RBP14.75□□□□□ -0.05
ERBB2-206ENST00000578373 DIAPH3Q9NSV4 1193 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms