RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 SCAF11Q99590 1463 aaKnown RBP13.02□□□□□ -0.33
BPTF-211ENST00000578307 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
BPTF-211ENST00000578307 PNISRQ8TF01 805 aaKnown RBP13.01□□□□□ -0.33
BPTF-211ENST00000578307 FRMPD1Q5SYB0 1578 aa13.01□□□□□ -0.33
BPTF-211ENST00000578307 ABCA6Q8N139 1617 aa13.01□□□□□ -0.33
BPTF-211ENST00000578307 MAP3K4Q9Y6R4 1608 aa13.01□□□□□ -0.33
BPTF-211ENST00000578307 IFT172Q9UG01 1749 aa13.01□□□□□ -0.33
BPTF-211ENST00000578307 FANCIQ9NVI1 1328 aa13.01□□□□□ -0.33
BPTF-211ENST00000578307 WASHC2CQ9Y4E1 1318 aa13.01□□□□□ -0.33
BPTF-211ENST00000578307 MYOM2P54296 1465 aa13.01□□□□□ -0.33
BPTF-211ENST00000578307 UGGT1Q9NYU2 1555 aa13.01□□□□□ -0.33
BPTF-211ENST00000578307 PARD3Q8TEW0 1356 aa13□□□□□ -0.33
BPTF-211ENST00000578307 EIF3AQ14152 1382 aaKnown RBP13□□□□□ -0.33
BPTF-211ENST00000578307 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
BPTF-211ENST00000578307 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
BPTF-211ENST00000578307 ZBTB22O15209 634 aa12.99□□□□□ -0.33
BPTF-211ENST00000578307 PER1O15534 1290 aaPredicted RBP12.99□□□□□ -0.33
BPTF-211ENST00000578307 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
BPTF-211ENST00000578307 CDCA8Q53HL2 280 aa12.98□□□□□ -0.33
BPTF-211ENST00000578307 NLRP13Q86W25 1043 aa12.98□□□□□ -0.33
BPTF-211ENST00000578307 LRPPRCP42704 1394 aaKnown RBP12.97□□□□□ -0.33
BPTF-211ENST00000578307 GGT6Q6P531 493 aa12.97□□□□□ -0.33
BPTF-211ENST00000578307 PANK3Q9H999 370 aa12.97□□□□□ -0.33
BPTF-211ENST00000578307 CFAP65Q6ZU64 1925 aaKnown RBP12.97□□□□□ -0.33
BPTF-211ENST00000578307 ADGRB3O60242 1522 aa12.96□□□□□ -0.33
BPTF-211ENST00000578307 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.33
BPTF-211ENST00000578307 RICTORQ6R327 1708 aa12.96□□□□□ -0.34
BPTF-211ENST00000578307 SYNMO15061 1565 aa12.95□□□□□ -0.34
BPTF-211ENST00000578307 NPATQ14207 1427 aa12.95□□□□□ -0.34
BPTF-211ENST00000578307 DIP2CQ9Y2E4 1556 aa12.95□□□□□ -0.34
BPTF-211ENST00000578307 CAMSAP1Q5T5Y3 1602 aa12.95□□□□□ -0.34
BPTF-211ENST00000578307 ABCC3O15438 1527 aa12.95□□□□□ -0.34
BPTF-211ENST00000578307 KDM5AP29375 1690 aaKnown RBP12.94□□□□□ -0.34
BPTF-211ENST00000578307 RAPGEF3O95398 923 aa12.94□□□□□ -0.34
BPTF-211ENST00000578307 IRX6P78412 446 aaPredicted RBP12.94□□□□□ -0.34
BPTF-211ENST00000578307 GLI2P10070 1586 aa12.94□□□□□ -0.34
BPTF-211ENST00000578307 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
BPTF-211ENST00000578307 NRXN1Q9ULB1 1477 aa12.94□□□□□ -0.34
BPTF-211ENST00000578307 PPLO60437 1756 aa12.93□□□□□ -0.34
BPTF-211ENST00000578307 ADGRF5Q8IZF2 1346 aa12.93□□□□□ -0.34
BPTF-211ENST00000578307 DEKP35659 375 aaKnown RBP12.93□□□□□ -0.34
BPTF-211ENST00000578307 NUDCQ9Y266 331 aa12.93□□□□□ -0.34
BPTF-211ENST00000578307 ZC3H13Q5T200 1668 aaKnown RBP12.93□□□□□ -0.34
BPTF-211ENST00000578307 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
BPTF-211ENST00000578307 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
BPTF-211ENST00000578307 CYB5RLQ6IPT4 315 aa12.91□□□□□ -0.34
BPTF-211ENST00000578307 MYOM1P52179 1685 aa12.91□□□□□ -0.34
BPTF-211ENST00000578307 NOS1P29475 1434 aa12.91□□□□□ -0.34
BPTF-211ENST00000578307 SETBP1Q9Y6X0 1596 aa12.91□□□□□ -0.34
BPTF-211ENST00000578307 KNSTRNQ9Y448 316 aa12.91□□□□□ -0.34
BPTF-211ENST00000578307 SALL2Q9Y467 1007 aaPredicted RBP12.91□□□□□ -0.34
BPTF-211ENST00000578307 RIMBP3CA6NJZ7 1639 aa12.9□□□□□ -0.34
BPTF-211ENST00000578307 RIMBP3BA6NNM3 1639 aa12.9□□□□□ -0.34
BPTF-211ENST00000578307 MYO3AQ8NEV4 1616 aa12.9□□□□□ -0.34
BPTF-211ENST00000578307 RIMBP3Q9UFD9 1639 aa12.9□□□□□ -0.34
BPTF-211ENST00000578307 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
BPTF-211ENST00000578307 SIGLEC1Q9BZZ2 1709 aa12.89□□□□□ -0.35
BPTF-211ENST00000578307 PPP4R2Q9NY27 417 aa12.89□□□□□ -0.35
BPTF-211ENST00000578307 ZMYM4Q5VZL5 1548 aa12.89□□□□□ -0.35
BPTF-211ENST00000578307 PIK3C2BO00750 1634 aa12.88□□□□□ -0.35
BPTF-211ENST00000578307 INSRP06213 1382 aa12.88□□□□□ -0.35
BPTF-211ENST00000578307 PKNOX2Q96KN3 472 aa12.88□□□□□ -0.35
BPTF-211ENST00000578307 PIK3C2GO75747 1445 aa12.87□□□□□ -0.35
BPTF-211ENST00000578307 ASXL1Q8IXJ9 1541 aa12.87□□□□□ -0.35
BPTF-211ENST00000578307 ARHGAP31Q2M1Z3 1444 aa12.87□□□□□ -0.35
BPTF-211ENST00000578307 ERVK-7P63135 1459 aa12.87□□□□□ -0.35
BPTF-211ENST00000578307 MSH5O43196 834 aa12.86□□□□□ -0.35
BPTF-211ENST00000578307 DIP2BQ9P265 1576 aa12.86□□□□□ -0.35
BPTF-211ENST00000578307 SBNO2Q9Y2G9 1366 aa12.86□□□□□ -0.35
BPTF-211ENST00000578307 YEATS2Q9ULM3 1422 aa12.86□□□□□ -0.35
BPTF-211ENST00000578307 SENP3-EIF4A1A0A087X0R7 540 aa12.85□□□□□ -0.35
BPTF-211ENST00000578307 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
BPTF-211ENST00000578307 C14orf93Q9H972 538 aaKnown RBP12.85□□□□□ -0.35
BPTF-211ENST00000578307 BLMP54132 1417 aaPredicted RBP12.84□□□□□ -0.35
BPTF-211ENST00000578307 NPC1L1Q9UHC9 1359 aa12.84□□□□□ -0.35
BPTF-211ENST00000578307 CENPJQ9HC77 1338 aaPredicted RBP12.84□□□□□ -0.35
BPTF-211ENST00000578307 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
BPTF-211ENST00000578307 PDE3BQ13370 1112 aa12.84□□□□□ -0.35
BPTF-211ENST00000578307 QRICH2Q9H0J4 1663 aa12.84□□□□□ -0.35
BPTF-211ENST00000578307 TSPOAP1O95153 1857 aa12.84□□□□□ -0.35
BPTF-211ENST00000578307 RNF123Q5XPI4 1314 aa12.83□□□□□ -0.35
BPTF-211ENST00000578307 FAM69CQ0P6D2 419 aa12.83□□□□□ -0.35
BPTF-211ENST00000578307 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
BPTF-211ENST00000578307 ADGRB1O14514 1584 aa12.83□□□□□ -0.36
BPTF-211ENST00000578307 NEXMIFQ5QGS0 1516 aa12.82□□□□□ -0.36
BPTF-211ENST00000578307 PREX1Q8TCU6 1659 aa12.82□□□□□ -0.36
BPTF-211ENST00000578307 VGFO15240 615 aaPredicted RBP12.82□□□□□ -0.36
BPTF-211ENST00000578307 TRAK1Q9UPV9 953 aa12.81□□□□□ -0.36
BPTF-211ENST00000578307 SLC52A1Q9NWF4 448 aa12.8□□□□□ -0.36
BPTF-211ENST00000578307 MYO5BQ9ULV0 1848 aa12.79□□□□□ -0.36
BPTF-211ENST00000578307 WDR43Q15061 677 aaKnown RBP eCLIP12.79□□□□□ -0.36
BPTF-211ENST00000578307 REREQ9P2R6 1566 aa12.78□□□□□ -0.36
BPTF-211ENST00000578307 ARHGEF28Q8N1W1 1705 aaKnown RBP12.78□□□□□ -0.36
BPTF-211ENST00000578307 IDI1Q13907 227 aa12.78□□□□□ -0.36
BPTF-211ENST00000578307 TMEM132EQ6IEE7 984 aa12.78□□□□□ -0.36
BPTF-211ENST00000578307 B4GALNT3Q6L9W6 998 aa12.77□□□□□ -0.36
BPTF-211ENST00000578307 ZFYVE9O95405 1425 aa12.77□□□□□ -0.36
BPTF-211ENST00000578307 ADAMTS8Q9UP79 889 aa12.77□□□□□ -0.37
BPTF-211ENST00000578307 TMEM131LA2VDJ0 1609 aa12.77□□□□□ -0.37
BPTF-211ENST00000578307 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms