RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 TET3O43151 1660 aa21.88■■□□□ 1.09
SMARCD2-205ENST00000577686 MSH6P52701 1360 aa21.87■■□□□ 1.09
SMARCD2-205ENST00000577686 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.86■■□□□ 1.09
SMARCD2-205ENST00000577686 NWD1Q149M9 1564 aa21.86■■□□□ 1.09
SMARCD2-205ENST00000577686 PLEKHG1Q9ULL1 1385 aa21.85■■□□□ 1.09
SMARCD2-205ENST00000577686 XIRP1Q702N8 1843 aaKnown RBP21.85■■□□□ 1.09
SMARCD2-205ENST00000577686 RIMS2Q9UQ26 1411 aa21.82■■□□□ 1.08
SMARCD2-205ENST00000577686 ROCK1Q13464 1354 aa21.82■■□□□ 1.08
SMARCD2-205ENST00000577686 UNC13BO14795 1591 aa21.82■■□□□ 1.08
SMARCD2-205ENST00000577686 GCC2Q8IWJ2 1684 aa21.82■■□□□ 1.08
SMARCD2-205ENST00000577686 ZFYVE9O95405 1425 aa21.8■■□□□ 1.08
SMARCD2-205ENST00000577686 CHGAP10645 457 aaKnown RBP21.8■■□□□ 1.08
SMARCD2-205ENST00000577686 ROBO1Q9Y6N7 1651 aa21.78■■□□□ 1.08
SMARCD2-205ENST00000577686 TBX22Q9Y458 520 aa21.77■■□□□ 1.08
SMARCD2-205ENST00000577686 NCOA3Q9Y6Q9 1424 aa21.77■■□□□ 1.08
SMARCD2-205ENST00000577686 C14orf37Q86TY3 774 aa21.76■■□□□ 1.07
SMARCD2-205ENST00000577686 TMEM131LA2VDJ0 1609 aa21.76■■□□□ 1.07
SMARCD2-205ENST00000577686 DIP2AQ14689 1571 aa21.75■■□□□ 1.07
SMARCD2-205ENST00000577686 SLAIN2Q9P270 581 aa21.75■■□□□ 1.07
SMARCD2-205ENST00000577686 PIK3R4Q99570 1358 aa21.74■■□□□ 1.07
SMARCD2-205ENST00000577686 RBM33Q96EV2 1170 aaKnown RBP21.73■■□□□ 1.07
SMARCD2-205ENST00000577686 IQGAP3Q86VI3 1631 aa21.73■■□□□ 1.07
SMARCD2-205ENST00000577686 NUP155O75694 1391 aa21.72■■□□□ 1.07
SMARCD2-205ENST00000577686 JCADQ9P266 1359 aa21.71■■□□□ 1.07
SMARCD2-205ENST00000577686 E9PCH4 1651 aa21.7■■□□□ 1.06
SMARCD2-205ENST00000577686 CHD2O14647 1828 aaKnown RBP21.69■■□□□ 1.06
SMARCD2-205ENST00000577686 CADPS2Q86UW7 1296 aa21.69■■□□□ 1.06
SMARCD2-205ENST00000577686 ATF3P18847 181 aa21.68■■□□□ 1.06
SMARCD2-205ENST00000577686 TRPM2O94759 1503 aa21.68■■□□□ 1.06
SMARCD2-205ENST00000577686 MYO5BQ9ULV0 1848 aa21.68■■□□□ 1.06
SMARCD2-205ENST00000577686 RGS17Q9UGC6 210 aaPredicted RBP21.67■■□□□ 1.06
SMARCD2-205ENST00000577686 PHLPP1O60346 1717 aa21.66■■□□□ 1.06
SMARCD2-205ENST00000577686 ITGAEP38570 1179 aa21.66■■□□□ 1.06
SMARCD2-205ENST00000577686 ADAMTS13Q76LX8 1427 aa21.65■■□□□ 1.06
SMARCD2-205ENST00000577686 C19orf44Q9H6X5 657 aa21.65■■□□□ 1.06
SMARCD2-205ENST00000577686 NUTM2DQ5VT03 806 aaPredicted RBP21.62■■□□□ 1.05
SMARCD2-205ENST00000577686 SPATA31A6Q5VVP1 1343 aa21.61■■□□□ 1.05
SMARCD2-205ENST00000577686 DCCP43146 1447 aa21.59■■□□□ 1.05
SMARCD2-205ENST00000577686 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
SMARCD2-205ENST00000577686 MEX3CQ5U5Q3 659 aaKnown RBP21.59■■□□□ 1.05
SMARCD2-205ENST00000577686 POTEAQ6S8J7 498 aa21.59■■□□□ 1.05
SMARCD2-205ENST00000577686 AMOTL2Q9Y2J4 779 aa21.59■■□□□ 1.05
SMARCD2-205ENST00000577686 COL16A1Q07092 1604 aaPredicted RBP21.58■■□□□ 1.04
SMARCD2-205ENST00000577686 AHDC1Q5TGY3 1603 aaPredicted RBP21.57■■□□□ 1.04
SMARCD2-205ENST00000577686 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.56■■□□□ 1.04
SMARCD2-205ENST00000577686 SPHKAPQ2M3C7 1700 aa21.55■■□□□ 1.04
SMARCD2-205ENST00000577686 SETBP1Q9Y6X0 1596 aa21.55■■□□□ 1.04
SMARCD2-205ENST00000577686 ZNF772Q68DY9 489 aaPredicted RBP21.54■■□□□ 1.04
SMARCD2-205ENST00000577686 PTPRUQ92729 1446 aa21.5■■□□□ 1.03
SMARCD2-205ENST00000577686 SHPRHQ149N8 1683 aa21.5■■□□□ 1.03
SMARCD2-205ENST00000577686 BRINP3Q76B58 766 aa21.49■■□□□ 1.03
SMARCD2-205ENST00000577686 XRN1Q8IZH2 1706 aaKnown RBP21.49■■□□□ 1.03
SMARCD2-205ENST00000577686 PPARGC1BQ86YN6 1023 aaKnown RBP21.47■■□□□ 1.03
SMARCD2-205ENST00000577686 ASXL1Q8IXJ9 1541 aa21.46■■□□□ 1.03
SMARCD2-205ENST00000577686 NRXN3Q9Y4C0 1643 aa21.46■■□□□ 1.03
SMARCD2-205ENST00000577686 LRP6O75581 1613 aa21.45■■□□□ 1.02
SMARCD2-205ENST00000577686 ADGRL3Q9HAR2 1447 aa21.45■■□□□ 1.02
SMARCD2-205ENST00000577686 RRBP1Q9P2E9 1410 aaKnown RBP21.45■■□□□ 1.02
SMARCD2-205ENST00000577686 VGFO15240 615 aaPredicted RBP21.43■■□□□ 1.02
SMARCD2-205ENST00000577686 LRRC59Q96AG4 307 aaKnown RBP21.43■■□□□ 1.02
SMARCD2-205ENST00000577686 METP08581 1390 aa21.43■■□□□ 1.02
SMARCD2-205ENST00000577686 MST1RQ04912 1400 aa21.43■■□□□ 1.02
SMARCD2-205ENST00000577686 NEXMIFQ5QGS0 1516 aa21.43■■□□□ 1.02
SMARCD2-205ENST00000577686 CLTCL1P53675 1640 aa21.42■■□□□ 1.02
SMARCD2-205ENST00000577686 SETD5Q9C0A6 1442 aa21.42■■□□□ 1.02
SMARCD2-205ENST00000577686 NAIPQ13075 1403 aa21.41■■□□□ 1.02
SMARCD2-205ENST00000577686 NUTM2BA6NNL0 878 aaPredicted RBP21.41■■□□□ 1.02
SMARCD2-205ENST00000577686 NUTM2EB1AL46 878 aaPredicted RBP21.41■■□□□ 1.02
SMARCD2-205ENST00000577686 NUTM2AQ8IVF1 878 aaPredicted RBP21.41■■□□□ 1.02
SMARCD2-205ENST00000577686 TRIM52Q96A61 297 aa21.41■■□□□ 1.02
SMARCD2-205ENST00000577686 KIF1BO60333 1816 aa21.4■■□□□ 1.02
SMARCD2-205ENST00000577686 RPGRIP1LQ68CZ1 1315 aa21.39■■□□□ 1.01
SMARCD2-205ENST00000577686 RXRBP28702 533 aa21.39■■□□□ 1.01
SMARCD2-205ENST00000577686 PTCH1Q13635 1447 aa21.38■■□□□ 1.01
SMARCD2-205ENST00000577686 NHSL1Q5SYE7 1610 aa21.37■■□□□ 1.01
SMARCD2-205ENST00000577686 SETD1AO15047 1707 aaKnown RBP21.36■■□□□ 1.01
SMARCD2-205ENST00000577686 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
SMARCD2-205ENST00000577686 CDK12Q9NYV4 1490 aaPredicted RBP21.35■■□□□ 1.01
SMARCD2-205ENST00000577686 SLC4A1APQ9BWU0 796 aaKnown RBP21.35■■□□□ 1.01
SMARCD2-205ENST00000577686 AFF2P51816 1311 aa21.33■■□□□ 1.01
SMARCD2-205ENST00000577686 NALCNQ8IZF0 1738 aa21.32■■□□□ 1
SMARCD2-205ENST00000577686 C1orf167Q5SNV9 1468 aa21.32■■□□□ 1
SMARCD2-205ENST00000577686 PRAG1Q86YV5 1406 aa21.31■■□□□ 1
SMARCD2-205ENST00000577686 PNPLA6Q8IY17 1366 aa21.31■■□□□ 1
SMARCD2-205ENST00000577686 C8orf37Q96NL8 207 aa21.29■■□□□ 1
SMARCD2-205ENST00000577686 UPF1Q92900 1129 aaKnown RBP eCLIP21.28■■□□□ 1
SMARCD2-205ENST00000577686 ROBO2Q9HCK4 1378 aa21.26■□□□□ 0.99
SMARCD2-205ENST00000577686 RBM6P78332 1123 aaKnown RBP21.26■□□□□ 0.99
SMARCD2-205ENST00000577686 CCDC144AA2RUR9 1427 aa21.25■□□□□ 0.99
SMARCD2-205ENST00000577686 NGLY1Q96IV0 654 aa21.25■□□□□ 0.99
SMARCD2-205ENST00000577686 ACIN1Q9UKV3 1341 aaKnown RBP21.24■□□□□ 0.99
SMARCD2-205ENST00000577686 LAMC1P11047 1609 aa21.23■□□□□ 0.99
SMARCD2-205ENST00000577686 DDX17Q92841 729 aaKnown RBP21.23■□□□□ 0.99
SMARCD2-205ENST00000577686 QTRT2Q9H974 415 aaKnown RBP21.23■□□□□ 0.99
SMARCD2-205ENST00000577686 SOS2Q07890 1332 aaPredicted RBP21.23■□□□□ 0.99
SMARCD2-205ENST00000577686 NPHP3Q7Z494 1330 aa21.22■□□□□ 0.99
SMARCD2-205ENST00000577686 PPLO60437 1756 aa21.21■□□□□ 0.99
SMARCD2-205ENST00000577686 ADAMTS2O95450 1211 aa21.21■□□□□ 0.99
SMARCD2-205ENST00000577686 ANKRD30BQ9BXX2 1392 aa21.21■□□□□ 0.99
SMARCD2-205ENST00000577686 CDC42BPGQ6DT37 1551 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms