RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CHIC2Q9UKJ5 165 aa20.86■□□□□ 0.93
COPS3-214ENST00000577246 POTEAQ6S8J7 498 aa20.85■□□□□ 0.93
COPS3-214ENST00000577246 RPRD2Q5VT52 1461 aaKnown RBP20.85■□□□□ 0.93
COPS3-214ENST00000577246 RBM33Q96EV2 1170 aaKnown RBP20.83■□□□□ 0.93
COPS3-214ENST00000577246 SLAIN2Q9P270 581 aa20.83■□□□□ 0.93
COPS3-214ENST00000577246 JCADQ9P266 1359 aa20.83■□□□□ 0.92
COPS3-214ENST00000577246 PPP1R15AO75807 674 aaPredicted RBP20.82■□□□□ 0.92
COPS3-214ENST00000577246 PLEKHG1Q9ULL1 1385 aa20.82■□□□□ 0.92
COPS3-214ENST00000577246 ADGRL2O95490 1459 aa20.8■□□□□ 0.92
COPS3-214ENST00000577246 NCOA3Q9Y6Q9 1424 aa20.79■□□□□ 0.92
COPS3-214ENST00000577246 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
COPS3-214ENST00000577246 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.77■□□□□ 0.92
COPS3-214ENST00000577246 ANKRD50Q9ULJ7 1429 aa20.77■□□□□ 0.91
COPS3-214ENST00000577246 RIMS2Q9UQ26 1411 aa20.77■□□□□ 0.91
COPS3-214ENST00000577246 PHLPP1O60346 1717 aa20.75■□□□□ 0.91
COPS3-214ENST00000577246 TBX22Q9Y458 520 aa20.75■□□□□ 0.91
COPS3-214ENST00000577246 C14orf37Q86TY3 774 aa20.74■□□□□ 0.91
COPS3-214ENST00000577246 SPATA31A6Q5VVP1 1343 aa20.74■□□□□ 0.91
COPS3-214ENST00000577246 CADPS2Q86UW7 1296 aa20.72■□□□□ 0.91
COPS3-214ENST00000577246 FAM50AQ14320 339 aaKnown RBP20.71■□□□□ 0.91
COPS3-214ENST00000577246 MEX3CQ5U5Q3 659 aaKnown RBP20.71■□□□□ 0.91
COPS3-214ENST00000577246 PIK3R4Q99570 1358 aa20.71■□□□□ 0.91
COPS3-214ENST00000577246 ATF3P18847 181 aa20.7■□□□□ 0.9
COPS3-214ENST00000577246 ZNF772Q68DY9 489 aaPredicted RBP20.7■□□□□ 0.9
COPS3-214ENST00000577246 CHD2O14647 1828 aaKnown RBP20.69■□□□□ 0.9
COPS3-214ENST00000577246 DIP2AQ14689 1571 aa20.69■□□□□ 0.9
COPS3-214ENST00000577246 TMEM131LA2VDJ0 1609 aa20.69■□□□□ 0.9
COPS3-214ENST00000577246 C19orf44Q9H6X5 657 aa20.69■□□□□ 0.9
COPS3-214ENST00000577246 COL16A1Q07092 1604 aaPredicted RBP20.68■□□□□ 0.9
COPS3-214ENST00000577246 CHGAP10645 457 aaKnown RBP20.68■□□□□ 0.9
COPS3-214ENST00000577246 GCC2Q8IWJ2 1684 aa20.67■□□□□ 0.9
COPS3-214ENST00000577246 AHDC1Q5TGY3 1603 aaPredicted RBP20.64■□□□□ 0.9
COPS3-214ENST00000577246 ADAMTS13Q76LX8 1427 aa20.64■□□□□ 0.89
COPS3-214ENST00000577246 LRP6O75581 1613 aa20.63■□□□□ 0.89
COPS3-214ENST00000577246 SETD1AO15047 1707 aaKnown RBP20.62■□□□□ 0.89
COPS3-214ENST00000577246 UNC13BO14795 1591 aa20.62■□□□□ 0.89
COPS3-214ENST00000577246 TRPM2O94759 1503 aa20.62■□□□□ 0.89
COPS3-214ENST00000577246 MYO5BQ9ULV0 1848 aa20.6■□□□□ 0.89
COPS3-214ENST00000577246 DCCP43146 1447 aa20.6■□□□□ 0.89
COPS3-214ENST00000577246 SHPRHQ149N8 1683 aa20.59■□□□□ 0.89
COPS3-214ENST00000577246 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
COPS3-214ENST00000577246 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
COPS3-214ENST00000577246 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.58■□□□□ 0.89
COPS3-214ENST00000577246 RXRBP28702 533 aa20.58■□□□□ 0.89
COPS3-214ENST00000577246 TRIM52Q96A61 297 aa20.58■□□□□ 0.89
COPS3-214ENST00000577246 AMOTL2Q9Y2J4 779 aa20.58■□□□□ 0.89
COPS3-214ENST00000577246 BRINP3Q76B58 766 aa20.57■□□□□ 0.88
COPS3-214ENST00000577246 UPF1Q92900 1129 aaKnown RBP eCLIP20.57■□□□□ 0.88
COPS3-214ENST00000577246 E9PCH4 1651 aa20.55■□□□□ 0.88
COPS3-214ENST00000577246 IQGAP3Q86VI3 1631 aa20.55■□□□□ 0.88
COPS3-214ENST00000577246 CDK12Q9NYV4 1490 aaPredicted RBP20.55■□□□□ 0.88
COPS3-214ENST00000577246 NUP155O75694 1391 aa20.53■□□□□ 0.88
COPS3-214ENST00000577246 NUTM2BA6NNL0 878 aaPredicted RBP20.52■□□□□ 0.88
COPS3-214ENST00000577246 NUTM2EB1AL46 878 aaPredicted RBP20.52■□□□□ 0.88
COPS3-214ENST00000577246 NUTM2AQ8IVF1 878 aaPredicted RBP20.52■□□□□ 0.88
COPS3-214ENST00000577246 SETD5Q9C0A6 1442 aa20.52■□□□□ 0.87
COPS3-214ENST00000577246 ASXL1Q8IXJ9 1541 aa20.51■□□□□ 0.87
COPS3-214ENST00000577246 PTPRUQ92729 1446 aa20.51■□□□□ 0.87
COPS3-214ENST00000577246 LRRC59Q96AG4 307 aaKnown RBP20.5■□□□□ 0.87
COPS3-214ENST00000577246 SETBP1Q9Y6X0 1596 aa20.49■□□□□ 0.87
COPS3-214ENST00000577246 AFF2P51816 1311 aa20.48■□□□□ 0.87
COPS3-214ENST00000577246 MST1RQ04912 1400 aa20.47■□□□□ 0.87
COPS3-214ENST00000577246 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
COPS3-214ENST00000577246 XRN1Q8IZH2 1706 aaKnown RBP20.46■□□□□ 0.87
COPS3-214ENST00000577246 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
COPS3-214ENST00000577246 C8orf37Q96NL8 207 aa20.43■□□□□ 0.86
COPS3-214ENST00000577246 NHSL1Q5SYE7 1610 aa20.42■□□□□ 0.86
COPS3-214ENST00000577246 RBM6P78332 1123 aaKnown RBP20.42■□□□□ 0.86
COPS3-214ENST00000577246 METP08581 1390 aa20.42■□□□□ 0.86
COPS3-214ENST00000577246 NRXN3Q9Y4C0 1643 aa20.42■□□□□ 0.86
COPS3-214ENST00000577246 PNPLA6Q8IY17 1366 aa20.4■□□□□ 0.86
COPS3-214ENST00000577246 QTRT2Q9H974 415 aaKnown RBP20.4■□□□□ 0.86
COPS3-214ENST00000577246 ITGAEP38570 1179 aa20.39■□□□□ 0.85
COPS3-214ENST00000577246 NGLY1Q96IV0 654 aa20.39■□□□□ 0.85
COPS3-214ENST00000577246 SPHKAPQ2M3C7 1700 aa20.38■□□□□ 0.85
COPS3-214ENST00000577246 RGS12O14924 1447 aa20.37■□□□□ 0.85
COPS3-214ENST00000577246 FOXD1Q16676 465 aa20.34■□□□□ 0.85
COPS3-214ENST00000577246 C1orf167Q5SNV9 1468 aa20.34■□□□□ 0.85
COPS3-214ENST00000577246 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
COPS3-214ENST00000577246 NEXMIFQ5QGS0 1516 aa20.33■□□□□ 0.85
COPS3-214ENST00000577246 DDX17Q92841 729 aaKnown RBP20.33■□□□□ 0.85
COPS3-214ENST00000577246 ADAMTS2O95450 1211 aa20.32■□□□□ 0.84
COPS3-214ENST00000577246 ATAD2Q6PL18 1390 aa20.32■□□□□ 0.84
COPS3-214ENST00000577246 NALCNQ8IZF0 1738 aa20.31■□□□□ 0.84
COPS3-214ENST00000577246 VGFO15240 615 aaPredicted RBP20.31■□□□□ 0.84
COPS3-214ENST00000577246 SOS2Q07890 1332 aaPredicted RBP20.29■□□□□ 0.84
COPS3-214ENST00000577246 USP21Q9UK80 565 aa20.29■□□□□ 0.84
COPS3-214ENST00000577246 TRPC5Q9UL62 973 aaPredicted RBP20.29■□□□□ 0.84
COPS3-214ENST00000577246 LAMC1P11047 1609 aa20.28■□□□□ 0.84
COPS3-214ENST00000577246 CLTCL1P53675 1640 aa20.28■□□□□ 0.84
COPS3-214ENST00000577246 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
COPS3-214ENST00000577246 HFM1A2PYH4 1435 aa20.26■□□□□ 0.83
COPS3-214ENST00000577246 RPGRIP1LQ68CZ1 1315 aa20.26■□□□□ 0.83
COPS3-214ENST00000577246 ROBO2Q9HCK4 1378 aa20.25■□□□□ 0.83
COPS3-214ENST00000577246 FNBP4Q8N3X1 1017 aaPredicted RBP20.25■□□□□ 0.83
COPS3-214ENST00000577246 ORAI2Q96SN7 254 aa20.25■□□□□ 0.83
COPS3-214ENST00000577246 NPHP3Q7Z494 1330 aa20.23■□□□□ 0.83
COPS3-214ENST00000577246 KIF1BO60333 1816 aa20.23■□□□□ 0.83
COPS3-214ENST00000577246 ATRNO75882 1429 aa20.2■□□□□ 0.82
COPS3-214ENST00000577246 CCDC125Q86Z20 511 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms