RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 KCTD12Q96CX2 325 aaKnown RBP7.87□□□□□ -1.15
CDC27-218ENST00000575830 REPIN1Q9BWE0 567 aaKnown RBP7.87□□□□□ -1.15
CDC27-218ENST00000575830 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.87□□□□□ -1.15
CDC27-218ENST00000575830 GOLGA8CPA6NN73 597 aa7.86□□□□□ -1.15
CDC27-218ENST00000575830 BCAMP50895 628 aa7.86□□□□□ -1.15
CDC27-218ENST00000575830 LRCH3Q96II8 777 aa7.86□□□□□ -1.15
CDC27-218ENST00000575830 SLC10A3P09131 477 aa7.85□□□□□ -1.15
CDC27-218ENST00000575830 SLF2Q8IX21 1173 aa7.85□□□□□ -1.15
CDC27-218ENST00000575830 TSR3Q9UJK0 312 aaKnown RBP7.85□□□□□ -1.15
CDC27-218ENST00000575830 CLCN1P35523 988 aa7.84□□□□□ -1.15
CDC27-218ENST00000575830 NLRP7Q8WX94 980 aa7.84□□□□□ -1.15
CDC27-218ENST00000575830 HCSTQ9UBK5 93 aa7.84□□□□□ -1.15
CDC27-218ENST00000575830 PRKCSHP14314 528 aaPredicted RBP7.83□□□□□ -1.16
CDC27-218ENST00000575830 HDGFP51858 240 aaKnown RBP7.83□□□□□ -1.16
CDC27-218ENST00000575830 PDE4DQ08499 809 aa7.83□□□□□ -1.16
CDC27-218ENST00000575830 NYAP1Q6ZVC0 841 aa7.83□□□□□ -1.16
CDC27-218ENST00000575830 PARP9Q8IXQ6 854 aa7.83□□□□□ -1.16
CDC27-218ENST00000575830 GPCPD1Q9NPB8 672 aa7.83□□□□□ -1.16
CDC27-218ENST00000575830 FAM217BQ9NTX9 383 aaPredicted RBP7.83□□□□□ -1.16
CDC27-218ENST00000575830 MDM2Q00987 491 aaPredicted RBP7.82□□□□□ -1.16
CDC27-218ENST00000575830 WBP1LQ9NX94 342 aa7.82□□□□□ -1.16
CDC27-218ENST00000575830 CD46P15529 392 aa7.81□□□□□ -1.16
CDC27-218ENST00000575830 NECTIN2Q92692 538 aa7.81□□□□□ -1.16
CDC27-218ENST00000575830 HPS5Q9UPZ3 1129 aa7.81□□□□□ -1.16
CDC27-218ENST00000575830 PPP4CP60510 307 aa7.79□□□□□ -1.16
CDC27-218ENST00000575830 GIGYF2Q6Y7W6 1299 aaKnown RBP7.79□□□□□ -1.16
CDC27-218ENST00000575830 SULF1Q8IWU6 871 aa7.79□□□□□ -1.16
CDC27-218ENST00000575830 GCGRP47871 477 aa7.78□□□□□ -1.16
CDC27-218ENST00000575830 APLP1P51693 650 aa7.78□□□□□ -1.16
CDC27-218ENST00000575830 ACTN4O43707 911 aaKnown RBP7.77□□□□□ -1.17
CDC27-218ENST00000575830 SSTR3P32745 418 aaPredicted RBP7.77□□□□□ -1.17
CDC27-218ENST00000575830 SLC4A3P48751 1232 aa7.77□□□□□ -1.17
CDC27-218ENST00000575830 MS4A1P11836 297 aa7.76□□□□□ -1.17
CDC27-218ENST00000575830 PTPN5P54829 565 aa7.76□□□□□ -1.17
CDC27-218ENST00000575830 RSPH4AQ5TD94 716 aa7.76□□□□□ -1.17
CDC27-218ENST00000575830 DDX11L8A8MPP1 907 aa7.75□□□□□ -1.17
CDC27-218ENST00000575830 ITGBL1O95965 494 aaPredicted RBP7.75□□□□□ -1.17
CDC27-218ENST00000575830 IFFO2Q5TF58 517 aa7.75□□□□□ -1.17
CDC27-218ENST00000575830 CFHP08603 1231 aa7.74□□□□□ -1.17
CDC27-218ENST00000575830 BRPF1P55201 1214 aaPredicted RBP7.74□□□□□ -1.17
CDC27-218ENST00000575830 PRR14Q9BWN1 585 aa7.74□□□□□ -1.17
CDC27-218ENST00000575830 TTLL12Q14166 644 aaPredicted RBP7.73□□□□□ -1.17
CDC27-218ENST00000575830 TJAP1Q5JTD0 557 aa7.73□□□□□ -1.17
CDC27-218ENST00000575830 KDM4CQ9H3R0 1056 aa7.72□□□□□ -1.17
CDC27-218ENST00000575830 GPBP1L1Q9HC44 474 aaPredicted RBP7.72□□□□□ -1.17
CDC27-218ENST00000575830 USP46P62068 366 aa7.71□□□□□ -1.18
CDC27-218ENST00000575830 KMT5BQ4FZB7 885 aa7.71□□□□□ -1.18
CDC27-218ENST00000575830 RDH13Q8NBN7 331 aa7.71□□□□□ -1.18
CDC27-218ENST00000575830 MORN1Q5T089 497 aa7.7□□□□□ -1.18
CDC27-218ENST00000575830 PLEKHG3A1L390 1219 aa7.69□□□□□ -1.18
CDC27-218ENST00000575830 RNF40O75150 1001 aa7.69□□□□□ -1.18
CDC27-218ENST00000575830 KDM4AO75164 1064 aa7.69□□□□□ -1.18
CDC27-218ENST00000575830 GJA5P36382 358 aa7.69□□□□□ -1.18
CDC27-218ENST00000575830 BEGAINQ9BUH8 593 aa7.69□□□□□ -1.18
CDC27-218ENST00000575830 ATP6V1AP38606 617 aa7.68□□□□□ -1.18
CDC27-218ENST00000575830 FUT2Q10981 343 aa7.68□□□□□ -1.18
CDC27-218ENST00000575830 SPIRE2Q8WWL2 714 aa7.68□□□□□ -1.18
CDC27-218ENST00000575830 MTRQ99707 1265 aa7.68□□□□□ -1.18
CDC27-218ENST00000575830 SALL2Q9Y467 1007 aaPredicted RBP7.68□□□□□ -1.18
CDC27-218ENST00000575830 FAM117AQ9C073 453 aa7.67□□□□□ -1.18
CDC27-218ENST00000575830 IL21Q9HBE4 155 aa7.67□□□□□ -1.18
CDC27-218ENST00000575830 PCDHB3Q9Y5E6 796 aa7.67□□□□□ -1.18
CDC27-218ENST00000575830 HOXA2O43364 376 aa7.66□□□□□ -1.18
CDC27-218ENST00000575830 TUSC1Q2TAM9 212 aa7.66□□□□□ -1.18
CDC27-218ENST00000575830 BLOC1S3Q6QNY0 202 aa7.66□□□□□ -1.18
CDC27-218ENST00000575830 THAP11Q96EK4 314 aa7.66□□□□□ -1.18
CDC27-218ENST00000575830 DIXDC1Q155Q3 683 aa7.65□□□□□ -1.18
CDC27-218ENST00000575830 SCUBE3Q8IX30 993 aa7.65□□□□□ -1.18
CDC27-218ENST00000575830 DDRGK1Q96HY6 314 aa7.65□□□□□ -1.18
CDC27-218ENST00000575830 TBC1D2Q9BYX2 928 aa7.65□□□□□ -1.18
CDC27-218ENST00000575830 SPTLC1O15269 473 aa7.64□□□□□ -1.19
CDC27-218ENST00000575830 ZPR1O75312 459 aa7.64□□□□□ -1.19
CDC27-218ENST00000575830 NEUROD2Q15784 382 aa7.64□□□□□ -1.19
CDC27-218ENST00000575830 ZNF516Q92618 1163 aa7.64□□□□□ -1.19
CDC27-218ENST00000575830 GOPCQ9HD26 462 aa7.64□□□□□ -1.19
CDC27-218ENST00000575830 SLC27A5Q9Y2P5 690 aa7.64□□□□□ -1.19
CDC27-218ENST00000575830 NR1I2O75469 434 aa7.63□□□□□ -1.19
CDC27-218ENST00000575830 PUS10Q3MIT2 529 aaKnown RBP7.63□□□□□ -1.19
CDC27-218ENST00000575830 GRIPAP1Q4V328 841 aa7.63□□□□□ -1.19
CDC27-218ENST00000575830 BRICD5Q6PL45 260 aa7.63□□□□□ -1.19
CDC27-218ENST00000575830 MOXD2PA6NHM9 499 aa7.62□□□□□ -1.19
CDC27-218ENST00000575830 KCNC4Q03721 635 aa7.62□□□□□ -1.19
CDC27-218ENST00000575830 MYSM1Q5VVJ2 828 aa7.62□□□□□ -1.19
CDC27-218ENST00000575830 RSBN1LQ6PCB5 846 aaPredicted RBP7.62□□□□□ -1.19
CDC27-218ENST00000575830 NUTM1Q86Y26 1132 aa7.62□□□□□ -1.19
CDC27-218ENST00000575830 PCDHGC3Q9UN70 934 aa7.62□□□□□ -1.19
CDC27-218ENST00000575830 SH3D19Q5HYK7 790 aa7.61□□□□□ -1.19
CDC27-218ENST00000575830 HLA-CQ95604 372 aa7.61□□□□□ -1.19
CDC27-218ENST00000575830 PLA2G2EQ9NZK7 142 aa7.61□□□□□ -1.19
CDC27-218ENST00000575830 COPS2P61201 443 aa7.6□□□□□ -1.19
CDC27-218ENST00000575830 RSPH6AQ9H0K4 717 aa7.6□□□□□ -1.19
CDC27-218ENST00000575830 NDUFV2P19404 249 aa7.59□□□□□ -1.19
CDC27-218ENST00000575830 SKIV2LQ15477 1246 aaKnown RBP7.59□□□□□ -1.19
CDC27-218ENST00000575830 NKX2-3Q8TAU0 364 aa7.59□□□□□ -1.19
CDC27-218ENST00000575830 FDX1P10109 184 aa7.58□□□□□ -1.2
CDC27-218ENST00000575830 GUCA2AQ02747 115 aa7.58□□□□□ -1.2
CDC27-218ENST00000575830 Q3C1V9 767 aa7.58□□□□□ -1.2
CDC27-218ENST00000575830 RIC3Q7Z5B4 369 aa7.58□□□□□ -1.2
CDC27-218ENST00000575830 FAM160A2Q8N612 972 aaPredicted RBP7.58□□□□□ -1.2
CDC27-218ENST00000575830 LIMD1Q9UGP4 676 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms