RNA–Protein interactions for RNA: ENST00000574202.1

ATP2A3-213, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 230 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-213ENST00000574202 ARHGAP23Q9P227 1491 aa16.65■□□□□ 0.26
ATP2A3-213ENST00000574202 RPGRIP1LQ68CZ1 1315 aa16.65■□□□□ 0.26
ATP2A3-213ENST00000574202 NBPF8Q3BBV2 869 aa16.64■□□□□ 0.25
ATP2A3-213ENST00000574202 SLIT1O75093 1534 aa16.64■□□□□ 0.25
ATP2A3-213ENST00000574202 PPLO60437 1756 aa16.64■□□□□ 0.25
ATP2A3-213ENST00000574202 ZFYVE9O95405 1425 aa16.63■□□□□ 0.25
ATP2A3-213ENST00000574202 NEXMIFQ5QGS0 1516 aa16.63■□□□□ 0.25
ATP2A3-213ENST00000574202 PRAG1Q86YV5 1406 aa16.62■□□□□ 0.25
ATP2A3-213ENST00000574202 MYOM2P54296 1465 aa16.62■□□□□ 0.25
ATP2A3-213ENST00000574202 TMEM2Q9UHN6 1383 aa16.59■□□□□ 0.25
ATP2A3-213ENST00000574202 VGFO15240 615 aaPredicted RBP16.58■□□□□ 0.24
ATP2A3-213ENST00000574202 RALGAPBQ86X10 1494 aa16.58■□□□□ 0.24
ATP2A3-213ENST00000574202 TRPM1Q7Z4N2 1603 aa16.58■□□□□ 0.24
ATP2A3-213ENST00000574202 STRCQ7RTU9 1775 aa16.57■□□□□ 0.24
ATP2A3-213ENST00000574202 ADGRF5Q8IZF2 1346 aa16.57■□□□□ 0.24
ATP2A3-213ENST00000574202 RIMS2Q9UQ26 1411 aa16.56■□□□□ 0.24
ATP2A3-213ENST00000574202 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
ATP2A3-213ENST00000574202 POLR1AO95602 1720 aaPredicted RBP16.56■□□□□ 0.24
ATP2A3-213ENST00000574202 NRXN1Q9ULB1 1477 aa16.55■□□□□ 0.24
ATP2A3-213ENST00000574202 HDGFP51858 240 aaKnown RBP16.55■□□□□ 0.24
ATP2A3-213ENST00000574202 HSPA2P54652 639 aa16.55■□□□□ 0.24
ATP2A3-213ENST00000574202 ROCK2O75116 1388 aaKnown RBP16.54■□□□□ 0.24
ATP2A3-213ENST00000574202 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.54■□□□□ 0.24
ATP2A3-213ENST00000574202 NRXN3Q9Y4C0 1643 aa16.54■□□□□ 0.24
ATP2A3-213ENST00000574202 KIAA1210Q9ULL0 1709 aa16.53■□□□□ 0.24
ATP2A3-213ENST00000574202 LTKP29376 864 aa16.53■□□□□ 0.24
ATP2A3-213ENST00000574202 THEMISQ8N1K5 641 aaPredicted RBP16.53■□□□□ 0.24
ATP2A3-213ENST00000574202 SCAF11Q99590 1463 aaKnown RBP16.53■□□□□ 0.24
ATP2A3-213ENST00000574202 PIK3C2GO75747 1445 aa16.53■□□□□ 0.24
ATP2A3-213ENST00000574202 CARD11Q9BXL7 1154 aa16.52■□□□□ 0.24
ATP2A3-213ENST00000574202 MED14O60244 1454 aa16.52■□□□□ 0.23
ATP2A3-213ENST00000574202 IQGAP1P46940 1657 aa16.5■□□□□ 0.23
ATP2A3-213ENST00000574202 LAMC1P11047 1609 aa16.5■□□□□ 0.23
ATP2A3-213ENST00000574202 ZNF316A6NFI3 1004 aaPredicted RBP16.5■□□□□ 0.23
ATP2A3-213ENST00000574202 EIF4G2P78344 907 aaKnown RBP eCLIP16.5■□□□□ 0.23
ATP2A3-213ENST00000574202 NBPF1Q3BBV0 1214 aa16.5■□□□□ 0.23
ATP2A3-213ENST00000574202 CFAP70Q5T0N1 1121 aa16.5■□□□□ 0.23
ATP2A3-213ENST00000574202 SETD1AO15047 1707 aaKnown RBP16.5■□□□□ 0.23
ATP2A3-213ENST00000574202 EID1Q9Y6B2 187 aa16.49■□□□□ 0.23
ATP2A3-213ENST00000574202 SETBP1Q9Y6X0 1596 aa16.49■□□□□ 0.23
ATP2A3-213ENST00000574202 GPRASP1Q5JY77 1395 aa16.49■□□□□ 0.23
ATP2A3-213ENST00000574202 C14orf93Q9H972 538 aaKnown RBP16.48■□□□□ 0.23
ATP2A3-213ENST00000574202 ADAMTS13Q76LX8 1427 aa16.47■□□□□ 0.23
ATP2A3-213ENST00000574202 HSPA5P11021 654 aaKnown RBP16.47■□□□□ 0.23
ATP2A3-213ENST00000574202 AEBP2Q6ZN18 517 aaPredicted RBP16.47■□□□□ 0.23
ATP2A3-213ENST00000574202 TXNDC2Q86VQ3 553 aa16.47■□□□□ 0.23
ATP2A3-213ENST00000574202 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
ATP2A3-213ENST00000574202 USP47Q96K76 1375 aa16.47■□□□□ 0.23
ATP2A3-213ENST00000574202 PLEKHG1Q9ULL1 1385 aa16.47■□□□□ 0.23
ATP2A3-213ENST00000574202 NCKAP5LQ9HCH0 1330 aa16.46■□□□□ 0.23
ATP2A3-213ENST00000574202 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
ATP2A3-213ENST00000574202 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
ATP2A3-213ENST00000574202 BCANQ96GW7 911 aa16.45■□□□□ 0.22
ATP2A3-213ENST00000574202 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
ATP2A3-213ENST00000574202 ALKQ9UM73 1620 aa16.44■□□□□ 0.22
ATP2A3-213ENST00000574202 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
ATP2A3-213ENST00000574202 DIP2AQ14689 1571 aa16.42■□□□□ 0.22
ATP2A3-213ENST00000574202 ADGRB1O14514 1584 aa16.41■□□□□ 0.22
ATP2A3-213ENST00000574202 TMEM132EQ6IEE7 984 aa16.4■□□□□ 0.22
ATP2A3-213ENST00000574202 EIF3AQ14152 1382 aaKnown RBP16.39■□□□□ 0.21
ATP2A3-213ENST00000574202 ST20-MTHFSA0A0A6YYL1 179 aa16.38■□□□□ 0.21
ATP2A3-213ENST00000574202 STRCP1A6NGW2 1772 aa16.36■□□□□ 0.21
ATP2A3-213ENST00000574202 NWD1Q149M9 1564 aa16.36■□□□□ 0.21
ATP2A3-213ENST00000574202 TRAK1Q9UPV9 953 aa16.36■□□□□ 0.21
ATP2A3-213ENST00000574202 METP08581 1390 aa16.36■□□□□ 0.21
ATP2A3-213ENST00000574202 XRN1Q8IZH2 1706 aaKnown RBP16.36■□□□□ 0.21
ATP2A3-213ENST00000574202 PTPRUQ92729 1446 aa16.36■□□□□ 0.21
ATP2A3-213ENST00000574202 STK26Q9P289 416 aa16.35■□□□□ 0.21
ATP2A3-213ENST00000574202 YTHDC2Q9H6S0 1430 aaKnown RBP16.35■□□□□ 0.21
ATP2A3-213ENST00000574202 SLC26A8Q96RN1 970 aa16.34■□□□□ 0.21
ATP2A3-213ENST00000574202 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.21
ATP2A3-213ENST00000574202 TBX22Q9Y458 520 aa16.33■□□□□ 0.2
ATP2A3-213ENST00000574202 KNDC1Q76NI1 1749 aa16.33■□□□□ 0.2
ATP2A3-213ENST00000574202 LRPPRCP42704 1394 aaKnown RBP16.32■□□□□ 0.2
ATP2A3-213ENST00000574202 ARHGEF28Q8N1W1 1705 aaKnown RBP16.32■□□□□ 0.2
ATP2A3-213ENST00000574202 PIK3R4Q99570 1358 aa16.3■□□□□ 0.2
ATP2A3-213ENST00000574202 CENPJQ9HC77 1338 aaPredicted RBP16.3■□□□□ 0.2
ATP2A3-213ENST00000574202 TECPR2O15040 1411 aa16.29■□□□□ 0.2
ATP2A3-213ENST00000574202 TESK2Q96S53 571 aa16.29■□□□□ 0.2
ATP2A3-213ENST00000574202 QRICH2Q9H0J4 1663 aa16.29■□□□□ 0.2
ATP2A3-213ENST00000574202 LTBP4Q8N2S1 1624 aa16.29■□□□□ 0.2
ATP2A3-213ENST00000574202 CPS1P31327 1500 aa16.29■□□□□ 0.2
ATP2A3-213ENST00000574202 DLC1Q96QB1 1528 aa16.29■□□□□ 0.2
ATP2A3-213ENST00000574202 ABCC11Q96J66 1382 aa16.28■□□□□ 0.2
ATP2A3-213ENST00000574202 TMF1P82094 1093 aa16.28■□□□□ 0.2
ATP2A3-213ENST00000574202 POGKQ9P215 609 aa16.28■□□□□ 0.2
ATP2A3-213ENST00000574202 CCDC7Q96M83 1385 aa16.27■□□□□ 0.2
ATP2A3-213ENST00000574202 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.2
ATP2A3-213ENST00000574202 C11orf95C9JLR9 678 aaPredicted RBP16.27■□□□□ 0.2
ATP2A3-213ENST00000574202 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
ATP2A3-213ENST00000574202 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
ATP2A3-213ENST00000574202 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
ATP2A3-213ENST00000574202 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
ATP2A3-213ENST00000574202 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
ATP2A3-213ENST00000574202 PTCH1Q13635 1447 aa16.26■□□□□ 0.19
ATP2A3-213ENST00000574202 ZNF335Q9H4Z2 1342 aaPredicted RBP16.25■□□□□ 0.19
ATP2A3-213ENST00000574202 NKTRP30414 1462 aaKnown RBP16.25■□□□□ 0.19
ATP2A3-213ENST00000574202 SBNO2Q9Y2G9 1366 aa16.25■□□□□ 0.19
ATP2A3-213ENST00000574202 SAFB2Q14151 953 aaKnown RBP eCLIP16.24■□□□□ 0.19
ATP2A3-213ENST00000574202 SIRT1Q96EB6 747 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms