RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 TRPM2O94759 1503 aa32.13■■■□□ 2.73
HCFC1R1-205ENST00000573842 HDGFP51858 240 aaKnown RBP32.13■■■□□ 2.73
HCFC1R1-205ENST00000573842 NWD1Q149M9 1564 aa32.12■■■□□ 2.73
HCFC1R1-205ENST00000573842 PLEKHG1Q9ULL1 1385 aa32.12■■■□□ 2.73
HCFC1R1-205ENST00000573842 TOM1O60784 492 aa32.12■■■□□ 2.73
HCFC1R1-205ENST00000573842 KIF1BO60333 1816 aa32.11■■■□□ 2.73
HCFC1R1-205ENST00000573842 CLTCL1P53675 1640 aa32.11■■■□□ 2.73
HCFC1R1-205ENST00000573842 BCANQ96GW7 911 aa32.09■■■□□ 2.73
HCFC1R1-205ENST00000573842 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.08■■■□□ 2.73
HCFC1R1-205ENST00000573842 ALKQ9UM73 1620 aa32.08■■■□□ 2.73
HCFC1R1-205ENST00000573842 DIP2AQ14689 1571 aa32.07■■■□□ 2.72
HCFC1R1-205ENST00000573842 SLC26A8Q96RN1 970 aa32.07■■■□□ 2.72
HCFC1R1-205ENST00000573842 SCAF1Q9H7N4 1312 aaKnown RBP32.06■■■□□ 2.72
HCFC1R1-205ENST00000573842 NKTRP30414 1462 aaKnown RBP32.06■■■□□ 2.72
HCFC1R1-205ENST00000573842 CHD2O14647 1828 aaKnown RBP32.06■■■□□ 2.72
HCFC1R1-205ENST00000573842 TRIM52Q96A61 297 aa32.06■■■□□ 2.72
HCFC1R1-205ENST00000573842 PIP4K2BP78356 416 aa32.02■■■□□ 2.72
HCFC1R1-205ENST00000573842 KCNA6P17658 529 aa32.01■■■□□ 2.71
HCFC1R1-205ENST00000573842 SENP3Q9H4L4 574 aaPredicted RBP31.98■■■□□ 2.71
HCFC1R1-205ENST00000573842 SLC4A1APQ9BWU0 796 aaKnown RBP31.96■■■□□ 2.71
HCFC1R1-205ENST00000573842 NUTM2DQ5VT03 806 aaPredicted RBP31.95■■■□□ 2.71
HCFC1R1-205ENST00000573842 TMEM94Q12767 1356 aa31.94■■■□□ 2.7
HCFC1R1-205ENST00000573842 ADAMTS13Q76LX8 1427 aa31.94■■■□□ 2.7
HCFC1R1-205ENST00000573842 NRXN3Q9Y4C0 1643 aa31.93■■■□□ 2.7
HCFC1R1-205ENST00000573842 NEXMIFQ5QGS0 1516 aa31.93■■■□□ 2.7
HCFC1R1-205ENST00000573842 SETBP1Q9Y6X0 1596 aa31.93■■■□□ 2.7
HCFC1R1-205ENST00000573842 ZNF326Q5BKZ1 582 aaKnown RBP31.92■■■□□ 2.7
HCFC1R1-205ENST00000573842 TBX22Q9Y458 520 aa31.9■■■□□ 2.7
HCFC1R1-205ENST00000573842 PROSER2Q86WR7 435 aaPredicted RBP31.89■■■□□ 2.7
HCFC1R1-205ENST00000573842 PIK3R4Q99570 1358 aa31.88■■■□□ 2.69
HCFC1R1-205ENST00000573842 HSPA1LP34931 641 aa31.86■■■□□ 2.69
HCFC1R1-205ENST00000573842 PPLO60437 1756 aa31.84■■■□□ 2.69
HCFC1R1-205ENST00000573842 DISP3Q9P2K9 1392 aa31.83■■■□□ 2.69
HCFC1R1-205ENST00000573842 SETD5Q9C0A6 1442 aa31.83■■■□□ 2.69
HCFC1R1-205ENST00000573842 ACIN1Q9UKV3 1341 aaKnown RBP31.82■■■□□ 2.68
HCFC1R1-205ENST00000573842 MSH6P52701 1360 aa31.81■■■□□ 2.68
HCFC1R1-205ENST00000573842 XRN1Q8IZH2 1706 aaKnown RBP31.81■■■□□ 2.68
HCFC1R1-205ENST00000573842 RBM33Q96EV2 1170 aaKnown RBP31.79■■■□□ 2.68
HCFC1R1-205ENST00000573842 ROBO1Q9Y6N7 1651 aa31.78■■■□□ 2.68
HCFC1R1-205ENST00000573842 CCDC144AA2RUR9 1427 aa31.77■■■□□ 2.68
HCFC1R1-205ENST00000573842 NCOA3Q9Y6Q9 1424 aa31.75■■■□□ 2.67
HCFC1R1-205ENST00000573842 FOXD1Q16676 465 aa31.75■■■□□ 2.67
HCFC1R1-205ENST00000573842 MPHOSPH9Q99550 1183 aa31.75■■■□□ 2.67
HCFC1R1-205ENST00000573842 SETD1AO15047 1707 aaKnown RBP31.74■■■□□ 2.67
HCFC1R1-205ENST00000573842 PTPRUQ92729 1446 aa31.73■■■□□ 2.67
HCFC1R1-205ENST00000573842 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.72■■■□□ 2.67
HCFC1R1-205ENST00000573842 FAM135BQ49AJ0 1406 aa31.72■■■□□ 2.67
HCFC1R1-205ENST00000573842 MED1Q15648 1581 aaPredicted RBP31.72■■■□□ 2.67
HCFC1R1-205ENST00000573842 IFT172Q9UG01 1749 aa31.72■■■□□ 2.67
HCFC1R1-205ENST00000573842 RAB3GAP2Q9H2M9 1393 aa31.7■■■□□ 2.67
HCFC1R1-205ENST00000573842 RPGRIP1LQ68CZ1 1315 aa31.7■■■□□ 2.66
HCFC1R1-205ENST00000573842 C14orf37Q86TY3 774 aa31.69■■■□□ 2.66
HCFC1R1-205ENST00000573842 AMOTL2Q9Y2J4 779 aa31.69■■■□□ 2.66
HCFC1R1-205ENST00000573842 VGFO15240 615 aaPredicted RBP31.67■■■□□ 2.66
HCFC1R1-205ENST00000573842 METP08581 1390 aa31.66■■■□□ 2.66
HCFC1R1-205ENST00000573842 SPATA31E1Q6ZUB1 1445 aa31.62■■■□□ 2.65
HCFC1R1-205ENST00000573842 PHLPP1O60346 1717 aa31.61■■■□□ 2.65
HCFC1R1-205ENST00000573842 NALCNQ8IZF0 1738 aa31.6■■■□□ 2.65
HCFC1R1-205ENST00000573842 DCCP43146 1447 aa31.58■■■□□ 2.65
HCFC1R1-205ENST00000573842 SLAIN2Q9P270 581 aa31.58■■■□□ 2.65
HCFC1R1-205ENST00000573842 CADPS2Q86UW7 1296 aa31.57■■■□□ 2.64
HCFC1R1-205ENST00000573842 C19orf44Q9H6X5 657 aa31.57■■■□□ 2.64
HCFC1R1-205ENST00000573842 ATF3P18847 181 aa31.56■■■□□ 2.64
HCFC1R1-205ENST00000573842 PTCH1Q13635 1447 aa31.55■■■□□ 2.64
HCFC1R1-205ENST00000573842 ANKRD30BQ9BXX2 1392 aa31.55■■■□□ 2.64
HCFC1R1-205ENST00000573842 RGL3Q3MIN7 710 aa31.52■■■□□ 2.64
HCFC1R1-205ENST00000573842 PRAG1Q86YV5 1406 aa31.51■■■□□ 2.64
HCFC1R1-205ENST00000573842 ADGRL3Q9HAR2 1447 aa31.51■■■□□ 2.64
HCFC1R1-205ENST00000573842 COL16A1Q07092 1604 aaPredicted RBP31.49■■■□□ 2.63
HCFC1R1-205ENST00000573842 AHDC1Q5TGY3 1603 aaPredicted RBP31.47■■■□□ 2.63
HCFC1R1-205ENST00000573842 LAMC1P11047 1609 aa31.46■■■□□ 2.63
HCFC1R1-205ENST00000573842 ILDR2Q71H61 639 aa31.46■■■□□ 2.63
HCFC1R1-205ENST00000573842 KNDC1Q76NI1 1749 aa31.46■■■□□ 2.63
HCFC1R1-205ENST00000573842 ADGRF5Q8IZF2 1346 aa31.46■■■□□ 2.63
HCFC1R1-205ENST00000573842 PIK3C2GO75747 1445 aa31.45■■■□□ 2.63
HCFC1R1-205ENST00000573842 HRCP23327 699 aa31.43■■■□□ 2.62
HCFC1R1-205ENST00000573842 PHF23Q9BUL5 403 aaPredicted RBP31.43■■■□□ 2.62
HCFC1R1-205ENST00000573842 MYOM2P54296 1465 aa31.43■■■□□ 2.62
HCFC1R1-205ENST00000573842 ROBO2Q9HCK4 1378 aa31.43■■■□□ 2.62
HCFC1R1-205ENST00000573842 MST1RQ04912 1400 aa31.42■■■□□ 2.62
HCFC1R1-205ENST00000573842 ASXL1Q8IXJ9 1541 aa31.41■■■□□ 2.62
HCFC1R1-205ENST00000573842 NHSL1Q5SYE7 1610 aa31.39■■■□□ 2.62
HCFC1R1-205ENST00000573842 NRXN1Q9ULB1 1477 aa31.37■■■□□ 2.61
HCFC1R1-205ENST00000573842 SHPRHQ149N8 1683 aa31.36■■■□□ 2.61
HCFC1R1-205ENST00000573842 JCADQ9P266 1359 aa31.36■■■□□ 2.61
HCFC1R1-205ENST00000573842 TECPR2O15040 1411 aa31.34■■■□□ 2.61
HCFC1R1-205ENST00000573842 BRINP3Q76B58 766 aa31.34■■■□□ 2.61
HCFC1R1-205ENST00000573842 CDC42BPGQ6DT37 1551 aa31.34■■■□□ 2.61
HCFC1R1-205ENST00000573842 LRPPRCP42704 1394 aaKnown RBP31.31■■■□□ 2.6
HCFC1R1-205ENST00000573842 YTHDC2Q9H6S0 1430 aaKnown RBP31.27■■■□□ 2.6
HCFC1R1-205ENST00000573842 C1orf167Q5SNV9 1468 aa31.27■■■□□ 2.6
HCFC1R1-205ENST00000573842 STK26Q9P289 416 aa31.26■■■□□ 2.59
HCFC1R1-205ENST00000573842 ABCC11Q96J66 1382 aa31.26■■■□□ 2.59
HCFC1R1-205ENST00000573842 SOCS7O14512 581 aa31.24■■■□□ 2.59
HCFC1R1-205ENST00000573842 TMEM132EQ6IEE7 984 aa31.23■■■□□ 2.59
HCFC1R1-205ENST00000573842 C14orf93Q9H972 538 aaKnown RBP31.22■■■□□ 2.59
HCFC1R1-205ENST00000573842 SPATA31A6Q5VVP1 1343 aa31.2■■■□□ 2.58
HCFC1R1-205ENST00000573842 FMN2Q9NZ56 1722 aa31.19■■■□□ 2.58
HCFC1R1-205ENST00000573842 DHX57Q6P158 1386 aaKnown RBP31.18■■■□□ 2.58
HCFC1R1-205ENST00000573842 CFAP70Q5T0N1 1121 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms