RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 NISCHQ9Y2I1 1504 aa52.66■■■■■ 6.02
HCFC1R1-205ENST00000573842 CCDC180Q9P1Z9 1646 aa47.19■■■■■ 5.15
HCFC1R1-205ENST00000573842 ABCC9O60706 1549 aa46.42■■■■■ 5.02
HCFC1R1-205ENST00000573842 RB1CC1Q8TDY2 1594 aa44.56■■■■■ 4.72
HCFC1R1-205ENST00000573842 NACADO15069 1562 aa44.38■■■■■ 4.69
HCFC1R1-205ENST00000573842 DCAF8L2P0C7V8 631 aa44.04■■■■■ 4.64
HCFC1R1-205ENST00000573842 MYO15BQ96JP2 1530 aa43.94■■■■■ 4.62
HCFC1R1-205ENST00000573842 ZCCHC6Q5VYS8 1495 aaKnown RBP43.81■■■■■ 4.6
HCFC1R1-205ENST00000573842 UNC13AQ9UPW8 1703 aa43.65■■■■■ 4.58
HCFC1R1-205ENST00000573842 DCAF1Q9Y4B6 1507 aa43.58■■■■■ 4.57
HCFC1R1-205ENST00000573842 PABPN1Q86U42 306 aaKnown RBP eCLIP43.18■■■■■ 4.5
HCFC1R1-205ENST00000573842 BICRAQ9NZM4 1560 aa43.16■■■■■ 4.5
HCFC1R1-205ENST00000573842 SCRIBQ14160 1630 aa42.95■■■■■ 4.47
HCFC1R1-205ENST00000573842 DNAJC5BQ9UF47 199 aa42.83■■■■■ 4.45
HCFC1R1-205ENST00000573842 SHROOM4Q9ULL8 1493 aa42.75■■■■■ 4.43
HCFC1R1-205ENST00000573842 EIF4G1Q04637 1599 aaKnown RBP42.1■■■■■ 4.33
HCFC1R1-205ENST00000573842 CC2D2AQ9P2K1 1620 aa42.05■■■■■ 4.32
HCFC1R1-205ENST00000573842 CECR2Q9BXF3 1484 aa41.78■■■■■ 4.28
HCFC1R1-205ENST00000573842 SMARCA4P51532 1647 aa41.04■■■■■ 4.16
HCFC1R1-205ENST00000573842 BAZ1AQ9NRL2 1556 aaPredicted RBP40.91■■■■■ 4.14
HCFC1R1-205ENST00000573842 NCAPD3P42695 1498 aa40.85■■■■■ 4.13
HCFC1R1-205ENST00000573842 SMARCA2P51531 1590 aa40.85■■■■■ 4.13
HCFC1R1-205ENST00000573842 ATAD2BQ9ULI0 1458 aa40.83■■■■■ 4.13
HCFC1R1-205ENST00000573842 HMGXB3Q12766 1538 aa40.73■■■■■ 4.11
HCFC1R1-205ENST00000573842 PEG3Q9GZU2 1588 aa40.63■■■■■ 4.09
HCFC1R1-205ENST00000573842 MROH2BQ7Z745 1585 aa40.56■■■■■ 4.08
HCFC1R1-205ENST00000573842 BAZ1BQ9UIG0 1483 aaKnown RBP40.52■■■■■ 4.08
HCFC1R1-205ENST00000573842 WIZO95785 1651 aa40.18■■■■■ 4.02
HCFC1R1-205ENST00000573842 ERCC6Q03468 1493 aa40.11■■■■■ 4.01
HCFC1R1-205ENST00000573842 NESP48681 1621 aa40.02■■■■■ 4
HCFC1R1-205ENST00000573842 LAMC3Q9Y6N6 1575 aa39.97■■■■□ 3.99
HCFC1R1-205ENST00000573842 RSF1Q96T23 1441 aaPredicted RBP39.88■■■■□ 3.97
HCFC1R1-205ENST00000573842 CUX2O14529 1486 aa39.85■■■■□ 3.97
HCFC1R1-205ENST00000573842 TOP2AP11388 1531 aaKnown RBP39.73■■■■□ 3.95
HCFC1R1-205ENST00000573842 KIF21AQ7Z4S6 1674 aa39.71■■■■□ 3.95
HCFC1R1-205ENST00000573842 THOC2Q8NI27 1593 aaKnown RBP39.65■■■■□ 3.94
HCFC1R1-205ENST00000573842 PDS5BQ9NTI5 1447 aa39.63■■■■□ 3.93
HCFC1R1-205ENST00000573842 CADPSQ9ULU8 1353 aa39.61■■■■□ 3.93
HCFC1R1-205ENST00000573842 CFTRP13569 1480 aa39.33■■■■□ 3.89
HCFC1R1-205ENST00000573842 MRC2Q9UBG0 1479 aa39.3■■■■□ 3.88
HCFC1R1-205ENST00000573842 PRDM2Q13029 1718 aa39.28■■■■□ 3.88
HCFC1R1-205ENST00000573842 CEP164Q9UPV0 1460 aa39.27■■■■□ 3.88
HCFC1R1-205ENST00000573842 FANCD2Q9BXW9 1451 aa39.24■■■■□ 3.87
HCFC1R1-205ENST00000573842 WDR62O43379 1518 aa39.21■■■■□ 3.87
HCFC1R1-205ENST00000573842 CCDC88BA6NC98 1476 aa39.16■■■■□ 3.86
HCFC1R1-205ENST00000573842 DNAJC5Q9H3Z4 198 aa38.98■■■■□ 3.83
HCFC1R1-205ENST00000573842 URB2Q14146 1524 aaKnown RBP38.86■■■■□ 3.81
HCFC1R1-205ENST00000573842 TOPBP1Q92547 1522 aa38.57■■■■□ 3.76
HCFC1R1-205ENST00000573842 ABCC8Q09428 1581 aa38.55■■■■□ 3.76
HCFC1R1-205ENST00000573842 DNMBPQ6XZF7 1577 aa38.54■■■■□ 3.76
HCFC1R1-205ENST00000573842 SUPT5HO00267 1087 aaKnown RBP38.48■■■■□ 3.75
HCFC1R1-205ENST00000573842 IFT140Q96RY7 1462 aa38.43■■■■□ 3.74
HCFC1R1-205ENST00000573842 ZNF608Q9ULD9 1512 aaPredicted RBP38.26■■■■□ 3.72
HCFC1R1-205ENST00000573842 EIF4G3O43432 1585 aaKnown RBP38.23■■■■□ 3.71
HCFC1R1-205ENST00000573842 TARBP1Q13395 1621 aaKnown RBP38.22■■■■□ 3.71
HCFC1R1-205ENST00000573842 POLA1P09884 1462 aaPredicted RBP38.2■■■■□ 3.71
HCFC1R1-205ENST00000573842 CUX1P39880 1505 aa38.1■■■■□ 3.69
HCFC1R1-205ENST00000573842 FGD5Q6ZNL6 1462 aa38.05■■■■□ 3.68
HCFC1R1-205ENST00000573842 RAD54L2Q9Y4B4 1467 aa37.99■■■■□ 3.67
HCFC1R1-205ENST00000573842 WDR97A6NE52 1622 aa37.98■■■■□ 3.67
HCFC1R1-205ENST00000573842 SOGA1O94964 1423 aa37.97■■■■□ 3.67
HCFC1R1-205ENST00000573842 OSCARQ8IYS5 282 aa37.97■■■■□ 3.67
HCFC1R1-205ENST00000573842 AQRO60306 1485 aaKnown RBP eCLIP37.95■■■■□ 3.672e-10■■■■■ 40.6
HCFC1R1-205ENST00000573842 CHD1O14646 1710 aa37.87■■■■□ 3.65
HCFC1R1-205ENST00000573842 TDRD9Q8NDG6 1382 aaKnown RBP37.79■■■■□ 3.64
HCFC1R1-205ENST00000573842 BIVM-ERCC5R4GMW8 1640 aa37.76■■■■□ 3.63
HCFC1R1-205ENST00000573842 TOP2BQ02880 1626 aa37.72■■■■□ 3.63
HCFC1R1-205ENST00000573842 PBRM1Q86U86 1689 aa37.71■■■■□ 3.63
HCFC1R1-205ENST00000573842 SNAPC4Q5SXM2 1469 aa37.67■■■■□ 3.62
HCFC1R1-205ENST00000573842 WRNQ14191 1432 aaPredicted RBP eCLIP37.67■■■■□ 3.62
HCFC1R1-205ENST00000573842 SYNJ1O43426 1573 aa37.67■■■■□ 3.62
HCFC1R1-205ENST00000573842 ABCA10Q8WWZ4 1543 aa37.66■■■■□ 3.62
HCFC1R1-205ENST00000573842 GRIN2BQ13224 1484 aa37.64■■■■□ 3.62
HCFC1R1-205ENST00000573842 ABCA5Q8WWZ7 1642 aa37.64■■■■□ 3.62
HCFC1R1-205ENST00000573842 MAGI1Q96QZ7 1491 aaPredicted RBP37.63■■■■□ 3.61
HCFC1R1-205ENST00000573842 RIMBP3CA6NJZ7 1639 aa37.59■■■■□ 3.61
HCFC1R1-205ENST00000573842 RIMBP3BA6NNM3 1639 aa37.59■■■■□ 3.61
HCFC1R1-205ENST00000573842 RIMBP3Q9UFD9 1639 aa37.59■■■■□ 3.61
HCFC1R1-205ENST00000573842 GAPVD1Q14C86 1478 aa37.58■■■■□ 3.61
HCFC1R1-205ENST00000573842 FBLN2P98095 1184 aa37.57■■■■□ 3.6
HCFC1R1-205ENST00000573842 TRIM41Q8WV44 630 aa37.55■■■■□ 3.6
HCFC1R1-205ENST00000573842 ARHGEF11O15085 1522 aa37.49■■■■□ 3.59
HCFC1R1-205ENST00000573842 SYNJ2O15056 1496 aa37.47■■■■□ 3.59
HCFC1R1-205ENST00000573842 CHMP7Q8WUX9 453 aaPredicted RBP37.4■■■■□ 3.58
HCFC1R1-205ENST00000573842 CLASP1Q7Z460 1538 aa37.36■■■■□ 3.57
HCFC1R1-205ENST00000573842 ADAMTS12P58397 1594 aa37.31■■■■□ 3.56
HCFC1R1-205ENST00000573842 ERICH3Q5RHP9 1530 aa37.24■■■■□ 3.55
HCFC1R1-205ENST00000573842 GRIN2AQ12879 1464 aa37.18■■■■□ 3.54
HCFC1R1-205ENST00000573842 ARAP1Q96P48 1450 aa37.13■■■■□ 3.54
HCFC1R1-205ENST00000573842 FHAD1B1AJZ9 1412 aa37.12■■■■□ 3.53
HCFC1R1-205ENST00000573842 CEP170Q5SW79 1584 aa37.04■■■■□ 3.52
HCFC1R1-205ENST00000573842 CYB5RLQ6IPT4 315 aa37.03■■■■□ 3.52
HCFC1R1-205ENST00000573842 NUP160Q12769 1436 aa37■■■■□ 3.51
HCFC1R1-205ENST00000573842 KIF27Q86VH2 1401 aa36.93■■■■□ 3.5
HCFC1R1-205ENST00000573842 CUL7Q14999 1698 aa36.9■■■■□ 3.5
HCFC1R1-205ENST00000573842 SHROOM2Q13796 1616 aa36.87■■■■□ 3.49
HCFC1R1-205ENST00000573842 RUSC2Q8N2Y8 1516 aa36.79■■■■□ 3.48
HCFC1R1-205ENST00000573842 ERCC6L2Q5T890 1561 aa36.75■■■■□ 3.47
HCFC1R1-205ENST00000573842 IGF1RP08069 1367 aa36.73■■■■□ 3.47
HCFC1R1-205ENST00000573842 PRG4Q92954 1404 aaPredicted RBP36.57■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms