RNA–Protein interactions for RNA: ENST00000571120.5

ABR-210, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-210ENST00000571120 PLEKHG1Q9ULL1 1385 aa18.4■□□□□ 0.54
ABR-210ENST00000571120 TOM1O60784 492 aa18.39■□□□□ 0.53
ABR-210ENST00000571120 SLC26A8Q96RN1 970 aa18.36■□□□□ 0.53
ABR-210ENST00000571120 TRPM2O94759 1503 aa18.35■□□□□ 0.53
ABR-210ENST00000571120 NKTRP30414 1462 aaKnown RBP18.35■□□□□ 0.53
ABR-210ENST00000571120 KCNA6P17658 529 aa18.35■□□□□ 0.53
ABR-210ENST00000571120 CLTCL1P53675 1640 aa18.34■□□□□ 0.53
ABR-210ENST00000571120 ADAMTS13Q76LX8 1427 aa18.33■□□□□ 0.53
ABR-210ENST00000571120 CHD2O14647 1828 aaKnown RBP18.33■□□□□ 0.53
ABR-210ENST00000571120 DIP2AQ14689 1571 aa18.33■□□□□ 0.52
ABR-210ENST00000571120 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
ABR-210ENST00000571120 PIP4K2BP78356 416 aa18.32■□□□□ 0.52
ABR-210ENST00000571120 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.32■□□□□ 0.52
ABR-210ENST00000571120 CHGAP10645 457 aaKnown RBP18.31■□□□□ 0.52
ABR-210ENST00000571120 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
ABR-210ENST00000571120 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
ABR-210ENST00000571120 HSPA1LP34931 641 aa18.3■□□□□ 0.52
ABR-210ENST00000571120 NRXN3Q9Y4C0 1643 aa18.3■□□□□ 0.52
ABR-210ENST00000571120 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
ABR-210ENST00000571120 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
ABR-210ENST00000571120 SETBP1Q9Y6X0 1596 aa18.27■□□□□ 0.52
ABR-210ENST00000571120 NEXMIFQ5QGS0 1516 aa18.27■□□□□ 0.51
ABR-210ENST00000571120 NUTM2DQ5VT03 806 aaPredicted RBP18.26■□□□□ 0.51
ABR-210ENST00000571120 PIK3R4Q99570 1358 aa18.26■□□□□ 0.51
ABR-210ENST00000571120 DISP3Q9P2K9 1392 aa18.26■□□□□ 0.51
ABR-210ENST00000571120 BCANQ96GW7 911 aa18.25■□□□□ 0.51
ABR-210ENST00000571120 KIF1BO60333 1816 aa18.25■□□□□ 0.51
ABR-210ENST00000571120 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
ABR-210ENST00000571120 PROSER2Q86WR7 435 aaPredicted RBP18.23■□□□□ 0.51
ABR-210ENST00000571120 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
ABR-210ENST00000571120 RBM33Q96EV2 1170 aaKnown RBP18.22■□□□□ 0.51
ABR-210ENST00000571120 FAM135BQ49AJ0 1406 aa18.22■□□□□ 0.51
ABR-210ENST00000571120 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
ABR-210ENST00000571120 NCOA3Q9Y6Q9 1424 aa18.22■□□□□ 0.51
ABR-210ENST00000571120 XRN1Q8IZH2 1706 aaKnown RBP18.21■□□□□ 0.51
ABR-210ENST00000571120 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
ABR-210ENST00000571120 MED1Q15648 1581 aaPredicted RBP18.2■□□□□ 0.5
ABR-210ENST00000571120 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
ABR-210ENST00000571120 ZNF326Q5BKZ1 582 aaKnown RBP18.18■□□□□ 0.5
ABR-210ENST00000571120 MSH6P52701 1360 aa18.17■□□□□ 0.5
ABR-210ENST00000571120 SETD1AO15047 1707 aaKnown RBP18.17■□□□□ 0.5
ABR-210ENST00000571120 ILDR2Q71H61 639 aa18.16■□□□□ 0.5
ABR-210ENST00000571120 PPLO60437 1756 aa18.16■□□□□ 0.5
ABR-210ENST00000571120 METP08581 1390 aa18.15■□□□□ 0.5
ABR-210ENST00000571120 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.15■□□□□ 0.5
ABR-210ENST00000571120 FOXD1Q16676 465 aa18.14■□□□□ 0.49
ABR-210ENST00000571120 AMOTL2Q9Y2J4 779 aa18.14■□□□□ 0.49
ABR-210ENST00000571120 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
ABR-210ENST00000571120 MPHOSPH9Q99550 1183 aa18.13■□□□□ 0.49
ABR-210ENST00000571120 RPGRIP1LQ68CZ1 1315 aa18.12■□□□□ 0.49
ABR-210ENST00000571120 SLAIN2Q9P270 581 aa18.11■□□□□ 0.49
ABR-210ENST00000571120 SPATA31E1Q6ZUB1 1445 aa18.11■□□□□ 0.49
ABR-210ENST00000571120 CCDC144AA2RUR9 1427 aa18.1■□□□□ 0.49
ABR-210ENST00000571120 PRAG1Q86YV5 1406 aa18.1■□□□□ 0.49
ABR-210ENST00000571120 ACIN1Q9UKV3 1341 aaKnown RBP18.1■□□□□ 0.49
ABR-210ENST00000571120 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
ABR-210ENST00000571120 DCCP43146 1447 aa18.09■□□□□ 0.49
ABR-210ENST00000571120 RAB3GAP2Q9H2M9 1393 aa18.08■□□□□ 0.49
ABR-210ENST00000571120 VGFO15240 615 aaPredicted RBP18.08■□□□□ 0.48
ABR-210ENST00000571120 C19orf44Q9H6X5 657 aa18.08■□□□□ 0.48
ABR-210ENST00000571120 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
ABR-210ENST00000571120 CADPS2Q86UW7 1296 aa18.06■□□□□ 0.48
ABR-210ENST00000571120 PHLPP1O60346 1717 aa18.06■□□□□ 0.48
ABR-210ENST00000571120 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
ABR-210ENST00000571120 COL16A1Q07092 1604 aaPredicted RBP18.05■□□□□ 0.48
ABR-210ENST00000571120 C14orf37Q86TY3 774 aa18.04■□□□□ 0.48
ABR-210ENST00000571120 AHDC1Q5TGY3 1603 aaPredicted RBP18.04■□□□□ 0.48
ABR-210ENST00000571120 ADGRL3Q9HAR2 1447 aa18.04■□□□□ 0.48
ABR-210ENST00000571120 MST1RQ04912 1400 aa18.02■□□□□ 0.48
ABR-210ENST00000571120 ANKRD30BQ9BXX2 1392 aa18.02■□□□□ 0.47
ABR-210ENST00000571120 ATF3P18847 181 aa18.01■□□□□ 0.47
ABR-210ENST00000571120 ROBO2Q9HCK4 1378 aa18.01■□□□□ 0.47
ABR-210ENST00000571120 ADGRF5Q8IZF2 1346 aa18■□□□□ 0.47
ABR-210ENST00000571120 SOCS7O14512 581 aa18■□□□□ 0.47
ABR-210ENST00000571120 PIK3C2GO75747 1445 aa17.99■□□□□ 0.47
ABR-210ENST00000571120 ASXL1Q8IXJ9 1541 aa17.99■□□□□ 0.47
ABR-210ENST00000571120 BRINP3Q76B58 766 aa17.98■□□□□ 0.47
ABR-210ENST00000571120 NRXN1Q9ULB1 1477 aa17.98■□□□□ 0.47
ABR-210ENST00000571120 JCADQ9P266 1359 aa17.97■□□□□ 0.47
ABR-210ENST00000571120 RGL3Q3MIN7 710 aa17.97■□□□□ 0.47
ABR-210ENST00000571120 NHSL1Q5SYE7 1610 aa17.97■□□□□ 0.47
ABR-210ENST00000571120 TECPR2O15040 1411 aa17.97■□□□□ 0.47
ABR-210ENST00000571120 MYOM2P54296 1465 aa17.96■□□□□ 0.47
ABR-210ENST00000571120 HRCP23327 699 aa17.96■□□□□ 0.47
ABR-210ENST00000571120 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
ABR-210ENST00000571120 RGS17Q9UGC6 210 aaPredicted RBP17.95■□□□□ 0.46
ABR-210ENST00000571120 SHPRHQ149N8 1683 aa17.94■□□□□ 0.46
ABR-210ENST00000571120 PHF23Q9BUL5 403 aaPredicted RBP17.94■□□□□ 0.46
ABR-210ENST00000571120 LAMC1P11047 1609 aa17.93■□□□□ 0.46
ABR-210ENST00000571120 C1orf167Q5SNV9 1468 aa17.92■□□□□ 0.46
ABR-210ENST00000571120 LRPPRCP42704 1394 aaKnown RBP17.91■□□□□ 0.46
ABR-210ENST00000571120 CDC42BPGQ6DT37 1551 aa17.91■□□□□ 0.46
ABR-210ENST00000571120 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
ABR-210ENST00000571120 LRP6O75581 1613 aa17.9■□□□□ 0.46
ABR-210ENST00000571120 SPATA31A6Q5VVP1 1343 aa17.88■□□□□ 0.45
ABR-210ENST00000571120 YTHDC2Q9H6S0 1430 aaKnown RBP17.88■□□□□ 0.45
ABR-210ENST00000571120 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
ABR-210ENST00000571120 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
ABR-210ENST00000571120 PLEKHH1Q9ULM0 1364 aa17.85■□□□□ 0.45
ABR-210ENST00000571120 ADGRB1O14514 1584 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms